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r-portalhacienda 0.1.7
Propagated dependencies: r-zoo@1.8-14 r-xts@0.14.1 r-timetk@2.9.1 r-tibble@3.3.0 r-purrr@1.2.0 r-magrittr@2.0.4 r-lubridate@1.9.4 r-httr@1.4.7 r-forecast@8.24.0 r-dplyr@1.1.4 r-curl@7.0.0
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/fmgarciadiaz/PortalHacienda-CRAN
Licenses: GPL 3
Build system: r
Synopsis: Acceder Con R a Los Datos Del Portal De Hacienda
Description:

Obtener listado de datos, acceder y extender series del Portal de Datos de Hacienda.Las proyecciones se realizan con forecast', Hyndman RJ, Khandakar Y (2008) <doi:10.18637/jss.v027.i03>. Search, download and forecast time-series from the Ministry of Economy of Argentina. Forecasts are built with the forecast package, Hyndman RJ, Khandakar Y (2008) <doi:10.18637/jss.v027.i03>.

r-tablecontainer 1.0.0
Propagated dependencies: r-glue@1.8.0 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=TableContainer
Licenses: Expat
Build system: r
Synopsis: Create a Table with Row, Column, and Table Annotations
Description:

Offers a TableContainer() function to create tables enriched with row, column, and table annotations. This package is similar to SummarizedExperiment in Bioconductor <doi:10.18129/B9.bioc.SummarizedExperiment>, but designed to work independently of Bioconductor, it ensures annotations are automatically updated when the table is subset. Additionally, it includes format_tbl() methods for enhanced table formatting and display.

sbcl-cl-readline 0.1.2-1.8438c9e
Dependencies: sbcl-alexandria@1.4-0.009b7e5 sbcl-cffi@0.24.1-2.32c90d4 readline@8.2.13
Channel: guix
Location: gnu/packages/lisp-xyz.scm (gnu packages lisp-xyz)
Home page: https://github.com/vindarel/cl-readline
Licenses: GPL 3+
Build system: asdf/sbcl
Synopsis: Common Lisp bindings to the GNU Readline library
Description:

The Readline library provides a set of functions for use by applications that allow users to edit command lines as they are typed in. Both Emacs and vi editing modes are available. The Readline library includes additional functions to maintain a list of previously-entered command lines, to recall and perhaps reedit those lines, and perform csh-like history expansion on previous commands.

r-conjointchecks 0.2.0
Propagated dependencies: r-rcpp@1.1.0
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://github.com/ben-domingue/ConjointChecks
Licenses: GPL 2+
Build system: r
Synopsis: Implementation of a Method to Check the Cancellation Axioms of Additive Conjoint Measurement
Description:

Implementation of a procedure---Domingue (2012) <https://eric.ed.gov/?id=ED548657>, Domingue (2014) <doi:10.1007/s11336-013-9342-4>; see also Karabatsos (2001) <https://psycnet.apa.org/record/2002-01665-005> and Kyngdon (2011) <doi:10.1348/2044-8317.002004>---to test the single and double cancellation axioms of conjoint measure in data that is dichotomously coded and measured with error.

r-covidmutations 0.1.3
Propagated dependencies: r-venndiagram@1.7.3 r-stringr@1.6.0 r-seqinr@4.2-36 r-ggpubr@0.6.2 r-ggplot2@4.0.1 r-dplyr@1.1.4 r-cowplot@1.2.0
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://github.com/MSQ-123/CovidMutations
Licenses: Artistic License 2.0
Build system: r
Synopsis: Mutation Analysis Toolkit for COVID-19 (Coronavirus Disease 2019)
Description:

This package provides a feasible framework for mutation analysis and reverse transcription polymerase chain reaction (RT-PCR) assay evaluation of COVID-19, including mutation profile visualization, statistics and mutation ratio of each assay. The mutation ratio is conducive to evaluating the coverage of RT-PCR assays in large-sized samples. Mercatelli, D. and Giorgi, F. M. (2020) <doi:10.20944/preprints202004.0529.v1>.

r-dockerparallel 1.0.4
Propagated dependencies: r-jsonlite@2.0.0
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://github.com/Jiefei-Wang/DockerParallel
Licenses: GPL 3
Build system: r
Synopsis: Using the Docker Container to Create R Workers on Local or Cloud Platform
Description:

This is the core package that provides both the user API and developer API to deploy the parallel cluster on the cloud using the container service. The user can call clusterPreset() to define the cloud service provider and container and makeDockerCluster() to create the cluster. The developer should see "developer's cookbook" on how to define the cloud provider and container.

r-fdrsamplesize2 0.2.0
Channel: guix-cran
Location: guix-cran/packages/f.scm (guix-cran packages f)
Home page: https://cran.r-project.org/package=FDRsamplesize2
Licenses: Expat
Build system: r
Synopsis: Computing Power and Sample Size for the False Discovery Rate in Multiple Applications
Description:

Defines a collection of functions to compute average power and sample size for studies that use the false discovery rate as the final measure of statistical significance. A three-rectangle approximation method of a p-value histogram is proposed to derive a formula to compute the statistical power for analyses that involve the FDR. The methodology paper of this package is under review.

r-syntenyplotter 1.0.0
Propagated dependencies: r-stringr@1.6.0 r-ggplot2@4.0.1
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=syntenyPlotteR
Licenses: Expat
Build system: r
Synopsis: Genome Synteny Visualization
Description:

Draw syntenic relationships between genome assemblies. There are 3 functions which take a tab delimited file containing alignment data for syntenic blocks between genomes to produce either a linear alignment plot, an evolution highway style plot, or a painted ideogram representing syntenic relationships. There is also a function to convert alignment data in the DESCHRAMBLER/inferCAR format to the required data structure.

r-shiny-semantic 0.5.1
Propagated dependencies: r-shiny@1.11.1 r-semantic-assets@1.1.0 r-r6@2.6.1 r-purrr@1.2.0 r-magrittr@2.0.4 r-jsonlite@2.0.0 r-htmlwidgets@1.6.4 r-htmltools@0.5.8.1 r-glue@1.8.0
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://appsilon.github.io/shiny.semantic/
Licenses: Expat
Build system: r
Synopsis: Semantic UI Support for Shiny
Description:

Creating a great user interface for your Shiny apps can be a hassle, especially if you want to work purely in R and don't want to use, for instance HTML templates. This package adds support for a powerful UI library Fomantic UI - <https://fomantic-ui.com/> (before Semantic). It also supports universal UI input binding that works with various DOM elements.

r-tinytest2junit 1.1.2
Propagated dependencies: r-tinytest@1.4.1
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/openanalytics/tinytest2JUnit
Licenses: GPL 3
Build system: r
Synopsis: Convert 'tinytest' Output to JUnit XML
Description:

Unit testing is a solid component of automated CI/CD pipelines. tinytest - a lightweight, zero-dependency alternative to testthat was developed. To be able to integrate tinytests results into common CI/CD systems the test results from tinytest need to be caputred and converted to JUnit XML format. tinytest2JUnit enables this conversion while staying also lightweight and only have tinytest as its dependency.

r-vald-extractor 0.1.1
Propagated dependencies: r-valdr@2.1.0 r-tidyr@1.3.1 r-stringr@1.6.0 r-readxl@1.4.5 r-lubridate@1.9.4 r-jsonlite@2.0.0 r-httr@1.4.7 r-ggplot2@4.0.1 r-dplyr@1.1.4 r-data-table@1.17.8
Channel: guix-cran
Location: guix-cran/packages/v.scm (guix-cran packages v)
Home page: https://github.com/praveenmaths89/vald.extractor
Licenses: Expat
Build system: r
Synopsis: Robust Pipeline for 'VALD' 'ForceDecks' Data Extraction and Analysis
Description:

This package provides a robust and reproducible pipeline for extracting, cleaning, and analyzing athlete performance data generated by VALD ForceDecks systems. The package supports batch-oriented data processing for large datasets, standardized data transformation workflows, and visualization utilities for sports science research and performance monitoring. It is designed to facilitate reproducible analysis across multiple sports with comprehensive documentation and error handling.

python-romanisim 0.11.2
Propagated dependencies: python-asdf@5.1.0 python-astropy@7.1.1 python-astropy-healpix@1.1.2 python-astroquery@0.4.11 python-crds@13.0.6 python-defusedxml@0.7.1 python-galsim@2.7.2 python-gwcs@0.26.0 python-numpy@1.26.4 python-photutils@2.3.0 python-roman-datamodels@0.28.1
Channel: guix
Location: gnu/packages/astronomy.scm (gnu packages astronomy)
Home page: https://github.com/spacetelescope/romanisim
Licenses: Modified BSD
Build system: pyproject
Synopsis: Nancy Grace Roman Space Telescope WFI Simulator
Description:

romanisim is a Galsim-based simulator of imaging data from the WFI on the Nancy Grace Roman Space Telescope (pronounced roman-eye-sim, stylized Roman I-Sim). It uses Galsim to render astronomical scenes, WebbPSF to model the point spread function, and CRDS to access the calibration information needed to produce realistic WFI images.

r-multiwgcnadata 1.8.0
Propagated dependencies: r-experimenthub@3.0.0
Channel: guix-bioc
Location: guix-bioc/packages/m.scm (guix-bioc packages m)
Home page: https://bioconductor.org/packages/multiWGCNAdata
Licenses: Artistic License 2.0
Build system: r
Synopsis: Data Package for multiWGCNA
Description:

Stores expression profiling data from experiments compatible with the multiWGCNA R package. This includes human postmortem microarray data from patients and controls (GSE28521), astrocyte Ribotag RNA-seq data from EAE and wildtype mice (GSE100329), and mouse RNA-seq data from tau pathology (rTg4510) and wildtype control mice (GSE125957). These data can be accessed using the ExperimentHub workflow (see multiWGCNA vignettes).

r-tenxvisiumdata 1.18.0
Propagated dependencies: r-spatialexperiment@1.20.0 r-experimenthub@3.0.0
Channel: guix-bioc
Location: guix-bioc/packages/t.scm (guix-bioc packages t)
Home page: https://github.com/helenalc/TENxVisiumData
Licenses: Expat
Build system: r
Synopsis: Visium spatial gene expression data by 10X Genomics
Description:

Collection of Visium spatial gene expression datasets by 10X Genomics, formatted into objects of class SpatialExperiment. Data cover various organisms and tissues, and include: single- and multi-section experiments, as well as single sections subjected to both whole transcriptome and targeted panel analysis. Datasets may be used for testing of and as examples in packages, for tutorials and workflow demonstrations, or similar purposes.

r-barborgradient 1.0.5
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://cran.r-project.org/package=BarBorGradient
Licenses: GPL 3
Build system: r
Synopsis: Function Minimum Approximator
Description:

Tool to find where a function has its lowest value(minimum). The functions can be any dimensions. Recommended use is with eps=10^-10, but can be run with 10^-20, although this depends on the function. Two more methods are in this package, simple gradient method (Gradmod) and Powell method (Powell). These are not recommended for use, their purpose are purely for comparison.

r-ccoptimalmatch 0.1.0
Propagated dependencies: r-rlang@1.1.6 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://cran.r-project.org/package=ccoptimalmatch
Licenses: GPL 2
Build system: r
Synopsis: Implementation of Case-Control Optimal Matching
Description:

Cases are matched to controls in an efficient, optimal and computationally flexible way. It uses the idea of sub-sampling in the level of the case, by creating pseudo-observations of controls. The user can select between replacement and without replacement, the number of controls, and several covariates to match upon. See Mamouris (2021) <doi:10.1186/s12874-021-01256-3> for an overview.

r-multilevelcoda 1.3.3
Propagated dependencies: r-shinystan@2.6.0 r-shiny@1.11.1 r-plotly@4.11.0 r-loo@2.8.0 r-htmltools@0.5.8.1 r-ggplot2@4.0.1 r-future@1.68.0 r-fs@1.6.6 r-foreach@1.5.2 r-extraoperators@0.3.0 r-emmeans@2.0.0 r-dt@0.34.0 r-dofuture@1.1.2 r-data-table@1.17.8 r-compositions@2.0-9 r-bslib@0.9.0 r-brms@2.23.0 r-bayesplot@1.14.0 r-abind@1.4-8
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://florale.github.io/multilevelcoda/
Licenses: GPL 3+
Build system: r
Synopsis: Estimate Bayesian Multilevel Models for Compositional Data
Description:

Implement Bayesian multilevel modelling for compositional data. Compute multilevel compositional data and perform log-ratio transforms at between and within-person levels, fit Bayesian multilevel models for compositional predictors and outcomes, and run post-hoc analyses such as isotemporal substitution models. References: Le, Stanford, Dumuid, and Wiley (2025) <doi:10.1037/met0000750>, Le, Dumuid, Stanford, and Wiley (2025) <doi:10.1080/00273171.2025.2565598>.

r-rsocialwatcher 0.1.1
Propagated dependencies: r-stringr@1.6.0 r-splitstackshape@1.4.8 r-sf@1.0-23 r-purrr@1.2.0 r-lubridate@1.9.4 r-jsonlite@2.0.0 r-httr@1.4.7 r-dplyr@1.1.4 r-curl@7.0.0
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://worldbank.github.io/rsocialwatcher/
Licenses: Expat
Build system: r
Synopsis: 'Facebook Marketing API' Social Watcher
Description:

Facilitates querying data from the รข Facebook Marketing API', particularly for social science research <https://developers.facebook.com/docs/marketing-apis/>. Data from the Facebook Marketing API has been used for a variety of social science applications, such as for poverty estimation (Marty and Duhaut (2024) <doi:10.1038/s41598-023-49564-6>), disease surveillance (Araujo et al. (2017) <doi:10.48550/arXiv.1705.04045>), and measuring migration (Alexander, Polimis, and Zagheni (2020) <doi:10.1007/s11113-020-09599-3>). The package facilitates querying the number of Facebook daily/monthly active users for multiple location types (e.g., from around a specific coordinate to an administrative region) and for a number of attribute types (e.g., interests, behaviors, education level, etc). The package supports making complex queries within one API call and making multiple API calls across different locations and/or parameters.

r-ceterisparibus 0.6
Propagated dependencies: r-gower@1.0.2 r-ggplot2@4.0.1 r-dalex@2.5.3
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://pbiecek.github.io/ceterisParibus/
Licenses: GPL 2
Build system: r
Synopsis: Ceteris Paribus Profiles
Description:

Ceteris Paribus Profiles (What-If Plots) are designed to present model responses around selected points in a feature space. For example around a single prediction for an interesting observation. Plots are designed to work in a model-agnostic fashion, they are working for any predictive Machine Learning model and allow for model comparisons. Ceteris Paribus Plots supplement the Break Down Plots from breakDown package.

r-ed50simulation 0.1.1
Propagated dependencies: r-boot@1.3-32
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://cran.r-project.org/package=ed50simulation
Licenses: GPL 3
Build system: r
Synopsis: Estimate ED50 and Its Confidence Interval
Description:

This package provides functions of five estimation method for ED50 (50 percent effective dose) are provided, and they are respectively Dixon-Mood method (1948) <doi:10.2307/2280071>, Choi's original turning point method (1990) <doi:10.2307/2531453> and it's modified version given by us, as well as logistic regression and isotonic regression. Besides, the package also supports comparison between two estimation results.

r-gisintegration 1.0
Propagated dependencies: r-tm@0.7-16 r-syn@0.1.0 r-stringr@1.6.0 r-shapefiles@0.7.2 r-sf@1.0-23 r-recordlinkage@0.4-12.6
Channel: guix-cran
Location: guix-cran/packages/g.scm (guix-cran packages g)
Home page: https://cran.r-project.org/package=GISINTEGRATION
Licenses: GPL 3
Build system: r
Synopsis: GIS Integration
Description:

Designed to facilitate the preprocessing and linking of GIS (Geographic Information System) databases <https://www.sciencedirect.com/topics/computer-science/gis-database>, the R package GISINTEGRATION offers a robust solution for efficiently preparing GIS data for advanced spatial analyses. This package excels in simplifying intrica procedures like data cleaning, normalization, and format conversion, ensuring that the data are optimally primed for precise and thorough analysis.

r-opendataformat 2.2.2
Propagated dependencies: r-zip@2.3.3 r-xml2@1.5.0 r-tibble@3.3.0 r-magrittr@2.0.4 r-jsonlite@2.0.0 r-data-table@1.17.8 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/o.scm (guix-cran packages o)
Home page: https://github.com/opendataformat/r-package-opendataformat
Licenses: Expat
Build system: r
Synopsis: Reading and Writing Open Data Format Files
Description:

The Open Data Format (ODF) is a new, non-proprietary, multilingual, metadata enriched, and zip-compressed data format with metadata structured in the Data Documentation Initiative (DDI) Codebook standard. This package allows reading and writing of data files in the Open Data Format (ODF) in R, and displaying metadata in different languages. For further information on the Open Data Format, see <https://opendataformat.github.io/>.

r-peaksegoptimal 2024.10.1
Propagated dependencies: r-penaltylearning@2024.9.3
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/tdhock/PeakSegOptimal
Licenses: GPL 3
Build system: r
Synopsis: Optimal Segmentation Subject to Up-Down Constraints
Description:

Computes optimal changepoint models using the Poisson likelihood for non-negative count data, subject to the PeakSeg constraint: the first change must be up, second change down, third change up, etc. For more info about the models and algorithms, read "Constrained Dynamic Programming and Supervised Penalty Learning Algorithms for Peak Detection" <https://jmlr.org/papers/v21/18-843.html> by TD Hocking et al.

r-spatialregimes 1.2
Propagated dependencies: r-spdep@1.4-1 r-spatialreg@1.4-2 r-quantreg@6.1 r-plm@2.6-7 r-gwmodel@2.4-1
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=SpatialRegimes
Licenses: GPL 2+
Build system: r
Synopsis: Spatial Constrained Clusterwise Regression
Description:

This package provides a collection of functions for estimating spatial regimes, aggregations of neighboring spatial units that are homogeneous in functional terms. The term spatial regime, therefore, should not be understood as a synonym for cluster. More precisely, the term cluster does not presuppose any functional relationship between the variables considered, while the term regime is linked to a regressive relationship underlying the spatial process.

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