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      /\__ \     / /\ \ \\ \ \_/ / /     / / /\ \__
     / /_ \ \   / / /\ \ \\ \___/ /     / / /\ \___\
    / / /\ \ \ / / /  \ \_\\ \ \_/      \ \ \ \/___/
   / / /  \/_// / /   / / / \ \ \        \ \ \
  / / /      / / /   / / /   \ \ \   _    \ \ \
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/_/ /      / / /____\/ /       \ \_\\ \/___/ /
\_\/       \/_________/         \/_/ \_____\/

Enter the query into the form above. You can look for specific version of a package by using @ symbol like this: gcc@10.

API method:

GET /api/packages?search=hello&page=1&limit=20

where search is your query, page is a page number and limit is a number of items on a single page. Pagination information (such as a number of pages and etc) is returned in response headers.

If you'd like to join our channel webring send a patch to ~whereiseveryone/toys@lists.sr.ht adding your channel as an entry in channels.scm.


r-recommenderlab 1.0.7
Propagated dependencies: r-registry@0.5-1 r-recosystem@0.5.1 r-proxy@0.4-27 r-matrixstats@1.5.0 r-matrix@1.7-4 r-irlba@2.3.5.1 r-arules@1.7-11
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/mhahsler/recommenderlab
Licenses: GPL 2
Build system: r
Synopsis: Lab for Developing and Testing Recommender Algorithms
Description:

This package provides a research infrastructure to develop and evaluate collaborative filtering recommender algorithms. This includes a sparse representation for user-item matrices, many popular algorithms, top-N recommendations, and cross-validation. Hahsler (2022) <doi:10.48550/arXiv.2205.12371>.

r-rcppredis 0.2.6
Propagated dependencies: r-rcpp@1.1.0 r-rapiserialize@0.1.4
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/eddelbuettel/rcppredis
Licenses: GPL 2+
Build system: r
Synopsis: 'Rcpp' Bindings for 'Redis' using the 'hiredis' Library
Description:

Connection to the Redis (or Valkey') key/value store using the C-language client library hiredis (included as a fallback) with MsgPack encoding provided via RcppMsgPack headers. It now also includes the pub/sub functions from the rredis package.

r-read-gb 2.2
Propagated dependencies: r-rentrez@1.2.4
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=read.gb
Licenses: GPL 3
Build system: r
Synopsis: Open GenBank Files
Description:

Opens complete record(s) with .gb extension from the NCBI/GenBank Nucleotide database and returns a list containing shaped record(s). These kind of files contains detailed records of DNA samples (locus, organism, type of sequence, source of the sequence...). An example of record can be found at <https://www.ncbi.nlm.nih.gov/nuccore/HE799070>.

r-rflocalfdr 0.9
Propagated dependencies: r-sn@2.1.1 r-ranger@0.17.0 r-randomforest@4.7-1.2 r-minpack-lm@1.2-4 r-fitdistrplus@1.2-4
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=RFlocalfdr
Licenses: GPL 3+
Build system: r
Synopsis: Significance Level for Random Forest Impurity Importance Scores
Description:

Sets a significance level for Random Forest MDI (Mean Decrease in Impurity, Gini or sum of squares) variable importance scores, using an empirical Bayes approach. See Dunne et al. (2022) <doi:10.1101/2022.04.06.487300>.

r-r311 0.4.4
Propagated dependencies: r-jsonlite@2.0.0 r-curl@7.0.0
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://ropengov.github.io/r311/
Licenses: Expat
Build system: r
Synopsis: Interface to the 'open311' Standard
Description:

Access and handle APIs that use the international open311 GeoReport v2 standard for civic issue tracking <https://wiki.open311.org/GeoReport_v2/>. Retrieve civic service types and request data. Select and add available open311 endpoints and jurisdictions. Implicitly supports custom queries and open311 extensions. Requires a minimal number of hard dependencies while still allowing the integration in common R formats ('xml2', tibble', sf').

r-rpbk 0.2.5
Propagated dependencies: r-stanheaders@2.32.10 r-rstantools@2.5.0 r-rstan@2.32.7 r-rcppparallel@5.1.11-1 r-rcppeigen@0.3.4.0.2 r-rcpp@1.1.0 r-ggplot2@4.0.1 r-bh@1.87.0-1
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://gitlab.in2p3.fr/mosaic-software/rPBK/
Licenses: Expat
Build system: r
Synopsis: Inference and Prediction of Generic Physiologically-Based Kinetic Models
Description:

Fit and simulate any kind of physiologically-based kinetic ('PBK') models whatever the number of compartments. Moreover, it allows to account for any link between pairs of compartments, as well as any link of each of the compartments with the external medium. Such generic PBK models have today applications in pharmacology (PBPK models) to describe drug effects, in toxicology and ecotoxicology (PBTK models) to describe chemical substance effects. In case of exposure to a parent compound (drug or chemical) the rPBK package allows to consider metabolites, whatever their number and their phase (I, II, ...). Last but not least, package rPBK can also be used for dynamic flux balance analysis (dFBA) to deal with metabolic networks. See also Charles et al. (2022) <doi:10.1101/2022.04.29.490045>.

r-randomlca 1.1-4
Propagated dependencies: r-rfast@2.1.5.2 r-matrix@1.7-4 r-lattice@0.22-7 r-foreach@1.5.2 r-fastghquad@1.0.1 r-dorng@1.8.6.2 r-doparallel@1.0.17 r-boot@1.3-32
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=randomLCA
Licenses: GPL 2+
Build system: r
Synopsis: Random Effects Latent Class Analysis
Description:

Fits standard and random effects latent class models. The single level random effects model is described in Qu et al <doi:10.2307/2533043> and the two level random effects model in Beath and Heller <doi:10.1177/1471082X0800900302>. Examples are given for their use in diagnostic testing.

r-rvmf 0.1.0
Propagated dependencies: r-scmodels@1.0.4 r-rfast@2.1.5.2 r-rcpp@1.1.0 r-bessel@0.7-0
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/seungwoo-stat/rvMF
Licenses: GPL 3+
Build system: r
Synopsis: Fast Generation of von Mises-Fisher Distributed Pseudo-Random Vectors
Description:

Generates pseudo-random vectors that follow an arbitrary von Mises-Fisher distribution on a sphere. This method is fast and efficient when generating a large number of pseudo-random vectors. Functions to generate random variates and compute density for the distribution of an inner product between von Mises-Fisher random vector and its mean direction are also provided. Details are in Kang and Oh (2024) <doi:10.1007/s11222-024-10419-3>.

r-retimer 0.1.3
Propagated dependencies: r-tuner@1.4.7 r-tidyr@1.3.1 r-tibble@3.3.0 r-stringr@1.6.0 r-signal@1.8-1 r-seewave@2.2.4 r-rpraat@1.3.2-1 r-purrr@1.2.0 r-phontools@0.2-2.2 r-gsignal@0.3-7 r-ggplot2@4.0.1 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=retimer
Licenses: Expat
Build system: r
Synopsis: Retime and Analyse Speech Signals
Description:

Retime speech signals with a native Waveform Similarity Overlap-Add (WSOLA) implementation translated from the TSM toolbox by Driedger & Müller (2014) <https://www.audiolabs-erlangen.de/content/resources/MIR/TSMtoolbox/2014_DriedgerMueller_TSM-Toolbox_DAFX.pdf>. Design retimings and pitch (f0) transformations with tidy data and apply them via Praat interface. Produce spectrograms, spectra, and amplitude envelopes. Includes implementation of vocalic speech envelope analysis (fft_spectrum) technique and example data (mm1) from Tilsen, S., & Johnson, K. (2008) <doi:10.1121/1.2947626>.

r-rpdbapi 2.1.2
Propagated dependencies: r-xml2@1.5.0 r-testthat@3.3.0 r-purrr@1.2.0 r-magrittr@2.0.4 r-jsonlite@2.0.0 r-httr@1.4.7 r-dplyr@1.1.4 r-bio3d@2.4-5
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=rPDBapi
Licenses: GPL 2+
Build system: r
Synopsis: Comprehensive Interface for Accessing the Protein Data Bank
Description:

Streamlines the interaction with the RCSB Protein Data Bank ('PDB') <https://www.rcsb.org/>. This interface offers an intuitive and powerful tool for searching and retrieving a diverse range of data types from the PDB'. It includes advanced functionalities like BLAST and sequence motif queries. Built upon the existing XML-based API of the PDB', it simplifies the creation of custom requests, thereby enhancing usability and flexibility for researchers.

r-ragtop 1.2.0
Propagated dependencies: r-limsolve@2.0.1 r-futile-logger@1.4.3
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=ragtop
Licenses: GPL 2+
Build system: r
Synopsis: Pricing Equity Derivatives with Extensions of Black-Scholes
Description:

Algorithms to price American and European equity options, convertible bonds and a variety of other financial derivatives. It uses an extension of the usual Black-Scholes model in which jump to default may occur at a probability specified by a power-law link between stock price and hazard rate as found in the paper by Takahashi, Kobayashi, and Nakagawa (2001) <doi:10.3905/jfi.2001.319302>. We use ideas and techniques from Andersen and Buffum (2002) <doi:10.2139/ssrn.355308> and Linetsky (2006) <doi:10.1111/j.1467-9965.2006.00271.x>.

r-rimagejroi 0.1.3
Propagated dependencies: r-spatstat-geom@3.6-1
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/davidcsterratt/RImageJROI
Licenses: GPL 3
Build system: r
Synopsis: Read and Write 'ImageJ' Region of Interest (ROI) Files
Description:

This package provides functions to read and write ImageJ (<https://imagej.net>) Region of Interest (ROI) files, to plot the ROIs and to convert them to spatstat (<https://spatstat.org/>) spatial patterns.

r-rbasex 1.1.2
Propagated dependencies: r-tibble@3.3.0 r-stringr@1.6.0 r-rex@1.2.1 r-rcurl@1.98-1.17 r-r6@2.6.1 r-pingr@2.0.5 r-openssl@2.3.4 r-magrittr@2.0.4 r-httr@1.4.7 r-dplyr@1.1.4 r-data-table@1.17.8
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/BenEngbers/RBaseX
Licenses: Expat
Build system: r
Synopsis: 'BaseX' Client
Description:

BaseX <https://basex.org> is a XML database engine and a compliant XQuery 3.1 processor with full support of W3C Update Facility'. This package is a full client-implementation of the client/server protocol for BaseX and provides functionalities to create, manipulate and query on XML-data.

r-ratingscalereduction 1.4
Propagated dependencies: r-proc@1.19.0.1 r-ggplot2@4.0.1
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=RatingScaleReduction
Licenses: GPL 2
Build system: r
Synopsis: Rating Scale Reduction Procedure
Description:

Describes a new procedure of reducing items in a rating scale called Rating Scale Reduction (RSR). The new stop criterion in RSR procedure is added (stop global max). The function order is replaced by sort.list.

r-r2rtf 1.3.0
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://merck.github.io/r2rtf/
Licenses: GPL 3
Build system: r
Synopsis: Easily Create Production-Ready Rich Text Format (RTF) Tables and Figures
Description:

Create production-ready Rich Text Format (RTF) tables and figures with flexible format.

r-rjdmarkdown 0.2.2
Dependencies: openjdk@25
Propagated dependencies: r-rjdemetra@0.2.8 r-magrittr@2.0.4 r-knitr@1.50 r-kableextra@1.4.0
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/AQLT/rjdmarkdown
Licenses: FSDG-compatible
Build system: r
Synopsis: 'rmarkdown' Extension for Formatted 'RJDemetra' Outputs
Description:

This package provides functions to have nice rmarkdown outputs of the seasonal and trading day adjustment models made with RJDemetra'.

r-rlmdatadriven 0.4.0
Propagated dependencies: r-tseries@0.10-58 r-mass@7.3-65
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=rlmDataDriven
Licenses: GPL 2+
Build system: r
Synopsis: Robust Regression with Data Driven Tuning Parameter
Description:

Data driven approach for robust regression estimation in homoscedastic and heteroscedastic context. See Wang et al. (2007), <doi:10.1198/106186007X180156> regarding homoscedastic framework.

r-rcppeigenad 1.1.0
Propagated dependencies: r-readr@2.1.6 r-rdpack@2.6.4 r-rcppeigen@0.3.4.0.2 r-rcpp@1.1.0 r-memoise@2.0.1 r-functional@0.6 r-bh@1.87.0-1
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=RcppEigenAD
Licenses: GPL 2+
Build system: r
Synopsis: Generate Partial Derivatives using 'Rcpp', 'Eigen' and 'CppAD'
Description:

Compiles C++ code using Rcpp <doi:10.18637/jss.v040.i08>, Eigen <doi:10.18637/jss.v052.i05> and CppAD to produce first and second order partial derivatives. Also provides an implementation of Faa di Bruno's formula to combine the partial derivatives of composed functions.

r-rvhpdt 4.0
Propagated dependencies: r-gtools@3.9.5
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=rvHPDT
Licenses: GPL 2+
Build system: r
Synopsis: Calling Haplotype-Based and Variant-Based Pedigree Disequilibrium Test for Rare Variants in Pedigrees
Description:

To detecting rare variants for binary traits using general pedigrees, the pedigree disequilibrium tests are proposed by collapsing rare haplotypes/variants with/without weights. To run the test, MERLIN is needed in Linux for haplotyping.

r-rchemo 0.1-3
Propagated dependencies: r-signal@1.8-1 r-fnn@1.1.4.1 r-e1071@1.7-16 r-data-table@1.17.8
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/ChemHouse-group/rchemo/
Licenses: GPL 3
Build system: r
Synopsis: Dimension Reduction, Regression and Discrimination for Chemometrics
Description:

Data exploration and prediction with focus on high dimensional data and chemometrics. The package was initially designed about partial least squares regression and discrimination models and variants, in particular locally weighted PLS models (LWPLS). Then, it has been expanded to many other methods for analyzing high dimensional data. The name rchemo comes from the fact that the package is orientated to chemometrics, but most of the provided methods are fully generic to other domains. Functions such as transform(), predict(), coef() and summary() are available. Tuning the predictive models is facilitated by generic functions gridscore() (validation dataset) and gridcv() (cross-validation). Faster versions are also available for models based on latent variables (LVs) (gridscorelv() and gridcvlv()) and ridge regularization (gridscorelb() and gridcvlb()).

r-rarecomb 1.1
Propagated dependencies: r-tidyr@1.3.1 r-stringr@1.6.0 r-sqldf@0.4-11 r-reshape2@1.4.5 r-pwr@1.3-0 r-magrittr@2.0.4 r-dplyr@1.1.4 r-arules@1.7-11
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=RareComb
Licenses: Expat
Build system: r
Synopsis: Combinatorial and Statistical Analyses of Rare Events
Description:

This package provides a custom implementation of the apriori algorithm and binomial tests to identify combinations of features (genes, variants etc) significantly enriched for simultaneous mutations/events from sparse Boolean input, see Vijay Kumar Pounraja, Santhosh Girirajan (2021). Version 1.1 includes a minor adjustment to the number of combinations to be considered for multiple testing correction. This updated version is more conservative in its approach and hence more selective. <doi:10.1101/2021.10.01.462832>.

r-recorder 0.8.2
Propagated dependencies: r-data-table@1.17.8 r-crayon@1.5.3
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/smaakage85/recorder
Licenses: Expat
Build system: r
Synopsis: Toolkit to Validate New Data for a Predictive Model
Description:

This package provides a lightweight toolkit to validate new observations when computing their predictions with a predictive model. The validation process consists of two steps: (1) record relevant statistics and meta data of the variables in the original training data for the predictive model and (2) use these data to run a set of basic validation tests on the new set of observations.

r-representr 0.1.6
Propagated dependencies: r-rcpp@1.1.0 r-foreach@1.5.2 r-dplyr@1.1.4 r-doparallel@1.0.17
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=representr
Licenses: GPL 3
Build system: r
Synopsis: Create Representative Records After Entity Resolution
Description:

An implementation of Kaplan, Betancourt, Steorts (2022) <doi:10.1080/00031305.2022.2041482> that creates representative records for use in downstream tasks after entity resolution is performed. Multiple methods for creating the representative records (data sets) are provided.

r-rcrisp 0.3.1
Propagated dependencies: r-visor@0.1.1 r-units@1.0-0 r-tidygraph@1.3.1 r-terra@1.8-86 r-stringr@1.6.0 r-sfnetworks@0.6.5 r-sfheaders@0.4.5 r-sf@1.0-23 r-rstac@1.0.1 r-rlang@1.1.6 r-rcoins@0.4.0 r-osmdata@0.3.0 r-lwgeom@0.2-14 r-dplyr@1.1.4 r-dbscan@1.2.3 r-checkmate@2.3.3
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cityriverspaces.github.io/rcrisp/
Licenses: FSDG-compatible
Build system: r
Synopsis: Automate the Delineation of Urban River Spaces
Description:

This package provides tools to automate the morphological delineation of riverside urban areas based on a method introduced in Forgaci (2018) <doi:10.7480/abe.2018.31>. Delineation entails the identification of corridor boundaries, segmentation of the corridor, and delineation of the river space using two-dimensional spatial information from street network data and digital elevation data in a projected CRS. The resulting delineation can be used to characterise spatial phenomena that can be related to the river as a central element.

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