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Estimates and plots as a heat map the rolling window wavelet correlation (RWWC) coefficients statistically significant (within the 95% CI) between two regular (evenly spaced) time series. RolWinWavCor also plots at the same graphic the time series under study. The RolWinWavCor was designed for financial time series, but this software can be used with other kinds of data (e.g., climatic, ecological, geological, etc). The functions contained in RolWinWavCor are highly flexible since these contains some parameters to personalize the time series under analysis and the heat maps of the rolling window wavelet correlation coefficients. Moreover, we have also included a data set (named EU_stock_markets) that contains nine European stock market indices to exemplify the use of the functions contained in RolWinWavCor'. Methods derived from Polanco-Martà nez et al (2018) <doi:10.1016/j.physa.2017.08.065>).
This package contains miscellaneous functions useful in biostatistics, mostly univariate and multivariate testing procedures with a special emphasis on permutation tests. Many functions intend to simplify user's life by shortening existing procedures or by implementing plotting functions that can be used with as many methods from different packages as possible.
User-friendly interface utilities for MCMC models via Just Another Gibbs Sampler (JAGS), facilitating the use of parallel (or distributed) processors for multiple chains, automated control of convergence and sample length diagnostics, and evaluation of the performance of a model using drop-k validation or against simulated data. Template model specifications can be generated using a standard lme4-style formula interface to assist users less familiar with the BUGS syntax. A JAGS extension module provides additional distributions including the Pareto family of distributions, the DuMouchel prior and the half-Cauchy prior.
Parameters estimation and linear regression models for Reliability distributions families reviewed by Almalki & Nadarajah (2014) <doi:10.1016/j.ress.2013.11.010> using Generalized Additive Models for Location, Scale and Shape, aka GAMLSS by Rigby & Stasinopoulos (2005) <doi:10.1111/j.1467-9876.2005.00510.x>.
It fires a query to the API to get the unsampled data in R for Google Analytics Premium Accounts. It retrieves data from the Google drive document and stores it into the local drive. The path to the excel file is returned by this package. The user can read data from the excel file into R using read.csv() function.
This package provides useful tools which supplement the use of Simulx software and R connectors ('Monolix Suite'). Simulx is an easy, efficient and flexible application for clinical trial simulations. You need Simulx software to be installed in order to use RsSimulx package. Among others tasks, RsSimulx provides the same functions as package mlxR does with a compatibility with Simulx software.
Implementation of various spirometry equations in R, currently the GLI-2012 (Global Lung Initiative; Quanjer et al. 2012 <doi:10.1183/09031936.00080312>), the race-neutral GLI global 2022 (Global Lung Initiative; Bowerman et al. 2023 <doi:10.1164/rccm.202205-0963OC>), the NHANES3 (National Health and Nutrition Examination Survey; Hankinson et al. 1999 <doi:10.1164/ajrccm.159.1.9712108>) and the JRS 2014 (Japanese Respiratory Society; Kubota et al. 2014 <doi:10.1016/j.resinv.2014.03.003>) equations. Also the GLI-2017 diffusing capacity equations <doi:10.1183/13993003.00010-2017> are implemented. Contains user-friendly functions to calculate predicted and LLN (Lower Limit of Normal) values for different spirometric parameters such as FEV1 (Forced Expiratory Volume in 1 second), FVC (Forced Vital Capacity), etc, and to convert absolute spirometry measurements to percent (%) predicted and z-scores.
Unified object oriented interface for multiple independent streams of random numbers from different sources.
This package provides methods for calculation and visualization of the Repertoire Dissimilarity Index. Citation: Bolen and Rubelt, et al (2017) <doi:10.1186/s12859-017-1556-5>.
This package provides R and JavaScript functions to allow WebGL'-based 3D plotting using the three.js JavaScript library. Interactivity through roll-over highlighting and toggle buttons is also supported.
The evaluation criteria of rangeland health, condition and landscape function analysis based on species diversity and functional diversity of rangeland plant communities.
Evaluates R source codes by variable and/or functions names. Similar source codes should deliver similarity coefficients near one. Since neither the frequency nor the order of the used names is considered, a manual inspection of the R source code is required to check for similarity. Possible use cases include detection of code clones for improving software quality and of plagiarism amongst students assignments.
Connect, query, and operate on information available from the Open Source Vulnerability database <https://osv.dev/>. Although CRAN has vulnerabilities listed, these are few compared to projects such as PyPI'. With tighter integration between R and Python', having an R specific package to access details about vulnerabilities from various sources is a worthwhile enterprise.
Loads Blackrock <https://blackrockneurotech.com> neural signal data files into the memory, provides utility tools to extract the data into common formats such as plain-text tsv and HDF5'.
Simulation of phenotype / genotype data under assortative mating. Includes functions for generating Bahadur order-2 multivariate Bernoulli variables with general and diagonal-plus-low-rank correlation structures. Further details are provided in: Border and Malik (2022) <doi:10.1101/2022.10.13.512132>.
Collection of tools to develop options strategies, value option contracts using the Black-Scholes-Merten option pricing model and calculate the option Greeks. Hull, John C. "Options, Futures, and Other Derivatives" (1997, ISBN:0-13-601589-1). Fischer Black, Myron Scholes (1973) "The Pricing of Options and Corporate Liabilities" <doi:10.1086/260062>.
Compute the repeated measures correlation, a statistical technique for determining the overall within-individual relationship among paired measures assessed on two or more occasions, first introduced by Bland and Altman (1995). Includes functions for diagnostics, p-value, effect size with confidence interval including optional bootstrapping, as well as graphing. Also includes several example datasets. For more details, see the web documentation <https://lmarusich.github.io/rmcorr/index.html> and the original paper: Bakdash and Marusich (2017) <doi:10.3389/fpsyg.2017.00456>.
Designed to be compatible with the R package DBI (Database Interface) when connecting to Amazon Web Service ('AWS') Athena <https://aws.amazon.com/athena/>. To do this Python Boto3 Software Development Kit ('SDK') <https://boto3.amazonaws.com/v1/documentation/api/latest/index.html> is used as a driver.
An R Commander plug-in for the WorldFlora package. It was mainly developed to show work flows and scripts for first-time users.
Scalable implementation of classification and regression forests, as described by Breiman (2001), <DOI:10.1023/A:1010933404324>.
Set of functions that enable you to use the FUSION commands (Program available in: <http://forsys.sefs.uw.edu/fusion/fusionlatest.html>).
Import Data from Relational Database Management Systems (RDBMS) and Health Information Systems ('HIS'). The current version of the package supports importing data from RDBMS including MS SQL', MySQL', PostGRESQL', and SQLite', as well as from two HIS platforms: DHIS2 and SORMAS'.
Accurately estimates the reliability of cognitive tasks using a fast and flexible permutation-based split-half reliability algorithm that supports stratified splitting while maintaining equal split sizes. See Kahveci, Bathke, and Blechert (2025) <doi:10.3758/s13423-024-02597-y> for details.
This package provides a series of functions that allow users to access the LinkedIn API to get information about connections, search for people and jobs, share updates with their network, and create group discussions. For more information about using the API please visit <https://developer.linkedin.com/>.