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    / / /\ \ \ / / /  \ \_\\ \ \_/      \ \ \ \/___/
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ruby-single-cov 1.9.1
Channel: guix
Location: gnu/packages/ruby.scm (gnu packages ruby)
Home page: https://github.com/grosser/single_cov
Licenses: Expat
Synopsis: Code coverage reporting tool
Description:

This package provides actionable code coverage reports for Ruby projects. It has very little overhead and can be easily integrated with development tools to catch coverage problems early.

texlive-rcsinfo 2024.2
Channel: guix
Location: gnu/packages/tex.scm (gnu packages tex)
Home page: https://ctan.org/pkg/rcsinfo
Licenses: LPPL (any version)
Synopsis: Support for the revision control system
Description:

This package provides a package to extract RCS information and use it in a LaTeX document. For users of LaTeX2HTML, rcsinfo.perl is included.

texlive-rtklage 2024.2
Channel: guix
Location: gnu/packages/tex.scm (gnu packages tex)
Home page: https://ctan.org/pkg/ratex
Licenses: LPPL (any version)
Synopsis: Package for German lawyers
Description:

RATeX is a newly developed bundle of packages and classes provided for German lawyers. Now in the early beginning it only contains rtklage, a class to make lawsuits.

texlive-raleway 2024.2
Channel: guix
Location: gnu/packages/tex.scm (gnu packages tex)
Home page: https://ctan.org/pkg/raleway
Licenses: SIL OFL 1.1
Synopsis: Use Raleway with TeX(-alike) systems
Description:

The package provides the Raleway family in an easy to use way. For XeLaTeX and LuaLaTeX users the original OpenType fonts are used. The entire font family is included.

r-caop-raa-2024 0.0.5
Propagated dependencies: r-tibble@3.2.1 r-stringi@1.8.4 r-sf@1.0-19 r-readr@2.1.5 r-glue@1.8.0 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://github.com/patterninstitute/CAOP.RAA.2024
Licenses: Expat
Synopsis: Official Administrative Map of the Azores (CAOP 2024)
Description:

This package provides the official administrative boundaries of the Azores (Região Autónoma dos Açores (RAA)) as defined in the 2024 edition of the Carta Administrativa Oficial de Portugal (CAOP), published by the Direção-Geral do Território (DGT). The package includes convenience functions to import these boundaries as sf objects for spatial analysis in R. Source: <https://geo2.dgterritorio.gov.pt/caop/CAOP_RAA_2024-gpkg.zip>.

r-rgenometracks 1.12.0
Propagated dependencies: r-rgenometracksdata@0.99.0 r-reticulate@1.40.0 r-imager@1.0.2
Channel: guix-bioc
Location: guix-bioc/packages/r.scm (guix-bioc packages r)
Home page: https://bioconductor.org/packages/rGenomeTracks
Licenses: GPL 3
Synopsis: Integerated visualization of epigenomic data
Description:

rGenomeTracks package leverages the power of pyGenomeTracks software with the interactivity of R. pyGenomeTracks is a python software that offers robust method for visualizing epigenetic data files like narrowPeak, Hic matrix, TADs and arcs, however though, here is no way currently to use it within R interactive session. rGenomeTracks wrapped the whole functionality of pyGenomeTracks with additional utilites to make to more pleasant for R users.

r-elnnpairedcov 0.3.2
Propagated dependencies: r-mass@7.3-61 r-limma@3.62.1 r-biobase@2.66.0
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://cran.r-project.org/package=eLNNpairedCov
Licenses: GPL 2+
Synopsis: Model-Based Gene Selection for Paired Data
Description:

Model-based clustering for paired data based on the regression of a mixture of Bayesian hierarchical models on covariates. Zhang et al. (2023) <doi:10.1186/s12859-023-05556-x>.

r-methodcompare 1.1.0
Propagated dependencies: r-rockchalk@1.8.157 r-mfp@1.5.4.1 r-matrix@1.7-1 r-lme4@1.1-35.5 r-estimatr@1.0.6
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://github.com/UBERLULU/MethodCompare
Licenses: GPL 3+
Synopsis: Evaluating Bias and Precision in Method Comparison Studies
Description:

Evaluate bias and precision in method comparison studies. One provides measurements for each method and it takes care of the estimates. Multiple plots to evaluate bias, precision and compare methods.

r-probsamplingi 2.0
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=ProbSamplingI
Licenses: GPL 2+
Synopsis: Probabilistic Sampling Design and Strategies
Description:

It allows the user to determine sample sizes, select probabilistic samples, make estimates of different parameters for the total finite population and in studio domains, using the main design drawings.

r-toomanycellsr 0.1.1.0
Propagated dependencies: r-matrix@1.7-1 r-jsonlite@1.8.9 r-imager@1.0.2 r-ggplot2@3.5.1 r-cowplot@1.1.3
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=TooManyCellsR
Licenses: GPL 3
Synopsis: An R Wrapper for 'TooManyCells'
Description:

An R wrapper for using TooManyCells', a command line program for clustering, visualizing, and quantifying cell clade relationships. See <https://gregoryschwartz.github.io/too-many-cells/> for more details.

r-wateryeartype 1.0.1
Channel: guix-cran
Location: guix-cran/packages/w.scm (guix-cran packages w)
Home page: https://cran.r-project.org/package=waterYearType
Licenses: Expat
Synopsis: Sacramento and San Joaquin Valley Water Year Types
Description:

This package provides Water Year Hydrologic Classification Indices based on measured unimpaired runoff (in million acre-feet). Data is provided by California Department of Water Resources and subject to revision.

r-zctacrosswalk 2.0.0
Propagated dependencies: r-stringr@1.5.1 r-rlang@1.1.4 r-readr@2.1.5 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/z.scm (guix-cran packages z)
Home page: https://github.com/MarketBridge/zctaCrosswalk
Licenses: Expat
Synopsis: Crosswalk Between 2020 Census ZIP Code Tabulation Areas (ZCTAs), States and Counties
Description:

This package contains the US Census Bureau's 2020 ZCTA to County Relationship File, as well as convenience functions to translate between States, Counties and ZIP Code Tabulation Areas (ZCTAs).

texlive-recycle 2024.2
Channel: guix
Location: gnu/packages/tex.scm (gnu packages tex)
Home page: https://ctan.org/pkg/recycle
Licenses: GPL 3+
Synopsis: Font providing the ``recyclable'' logo
Description:

This single-character font is provided as Metafont source, and in Adobe Type 1 format. It is accompanied by a trivial LaTeX package to use the logo at various sizes.

r-reporterscore 0.1.9
Propagated dependencies: r-stringr@1.5.1 r-scales@1.3.0 r-reshape2@1.4.4 r-pcutils@0.2.8 r-magrittr@2.0.3 r-ggrepel@0.9.6 r-ggplot2@3.5.1 r-ggnewscale@0.5.0 r-foreach@1.5.2 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/Asa12138/ReporterScore
Licenses: GPL 3
Synopsis: Generalized Reporter Score-Based Enrichment Analysis for Omics Data
Description:

Inspired by the classic RSA', we developed the improved Generalized Reporter Score-based Analysis (GRSA) method, implemented in the R package ReporterScore', along with comprehensive visualization methods and pathway databases. GRSA is a threshold-free method that works well with all types of biomedical features, such as genes, chemical compounds, and microbial species. Importantly, the GRSA supports multi-group and longitudinal experimental designs, because of the included multi-group-compatible statistical methods.

r-rjwsacruncher 0.2.1
Propagated dependencies: r-xml@3.99-0.17
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/AQLT/rjwsacruncher
Licenses: GPL 3
Synopsis: Interface to the 'JWSACruncher' of 'JDemetra+'
Description:

JDemetra+ (<https://github.com/jdemetra/jdemetra-app>) is the seasonal adjustment software officially recommended to the members of the European Statistical System and the European System of Central Banks. Seasonal adjustment models performed with JDemetra+ can be stored into workspaces. JWSACruncher (<https://github.com/jdemetra/jwsacruncher/releases>) is a console tool that re-estimates all the multi-processing defined in a workspace and to export the result. rjwsacruncher allows to launch easily the JWSACruncher'.

ruby-multi-json 1.12.2
Channel: wigust
Location: wigust/packages/ruby.scm (wigust packages ruby)
Home page: http://github.com/intridea/multi_json
Licenses: Expat
Synopsis: A common interface to multiple JSON libraries
Description:

This package provides a common interface to multiple JSON libraries, including Oj, Yajl, the JSON gem (with C-extensions), the pure-Ruby JSON gem, NSJSONSerialization, gson.rb, JrJackson, and OkJson.

r-avirtualtwins 1.0.1
Propagated dependencies: r-rpart@4.1.23 r-randomforest@4.7-1.2 r-party@1.3-17
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://github.com/prise6/aVirtualTwins
Licenses: GPL 3 FSDG-compatible
Synopsis: Adaptation of Virtual Twins Method from Jared Foster
Description:

Research of subgroups in random clinical trials with binary outcome and two treatments groups. This is an adaptation of the Jared Foster method (<https://www.ncbi.nlm.nih.gov/pubmed/21815180>).

r-bayesdccgarch 3.0.4
Propagated dependencies: r-numderiv@2016.8-1.1 r-coda@0.19-4.1
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://ui.adsabs.harvard.edu/abs/2014arXiv1412.2967F/abstract
Licenses: GPL 2+
Synopsis: Methods and Tools for Bayesian Dynamic Conditional Correlation GARCH(1,1) Model
Description:

Bayesian estimation of dynamic conditional correlation GARCH model for multivariate time series volatility (Fioruci, J.A., Ehlers, R.S. and Andrade-Filho, M.G., (2014). <doi:10.1080/02664763.2013.839635>.

r-cohortbuilder 0.3.0
Propagated dependencies: r-tidyr@1.3.1 r-tibble@3.2.1 r-rlang@1.1.4 r-r6@2.5.1 r-purrr@1.0.2 r-magrittr@2.0.3 r-jsonlite@1.8.9 r-glue@1.8.0 r-ggplot2@3.5.1 r-formatr@1.14 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://github.com/r-world-devs/cohortBuilder/
Licenses: Expat
Synopsis: Data Source Agnostic Filtering Tools
Description:

Common API for filtering data stored in different data models. Provides multiple filter types and reproducible R code. Works standalone or with shinyCohortBuilder as the GUI for interactive Shiny apps.

r-decomposedpsf 0.2
Propagated dependencies: r-tseries@0.10-58 r-rlibeemd@1.4.4 r-psf@0.5 r-forecast@8.23.0
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://www.neerajbokde.in/software/
Licenses: GPL 2+ GPL 3+
Synopsis: Time Series Prediction with PSF and Decomposition Methods (EMD and EEMD)
Description:

Predict future values with hybrid combinations of Pattern Sequence based Forecasting (PSF), Autoregressive Integrated Moving Average (ARIMA), Empirical Mode Decomposition (EMD) and Ensemble Empirical Mode Decomposition (EEMD) methods based hybrid methods.

r-modopt-matlab 1.0-2
Propagated dependencies: r-roi-plugin-quadprog@1.0-1 r-roi-plugin-glpk@1.0-0 r-roi@1.0-1
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: http://www.finance-r.com/
Licenses: Expat
Synopsis: 'MatLab'-Style Modeling of Optimization Problems
Description:

MatLab'-Style Modeling of Optimization Problems with R'. This package provides a set of convenience functions to transform a MatLab'-style optimization modeling structure to its ROI equivalent.

r-queuecomputer 1.2.0
Propagated dependencies: r-tidyr@1.3.1 r-rcpparmadillo@14.0.2-1 r-rcpp@1.0.13-1 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/q.scm (guix-cran packages q)
Home page: https://github.com/AnthonyEbert/queuecomputer
Licenses: GPL 2 FSDG-compatible
Synopsis: Computationally Efficient Queue Simulation
Description:

Implementation of a computationally efficient method for simulating queues with arbitrary arrival and service times. Please see Ebert, Wu, Mengersen & Ruggeri (2020, <doi:10.18637/jss.v095.i05>) for further details.

r-survpresmooth 1.1-12
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=survPresmooth
Licenses: GPL 2+
Synopsis: Presmoothed Estimation in Survival Analysis
Description:

Presmoothed estimators of survival, density, cumulative and non-cumulative hazard functions with right-censored survival data. For details, see Lopez-de-Ullibarri and Jacome (2013) <doi:10.18637/jss.v054.i11>.

r-surrogaterank 1.0
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=SurrogateRank
Licenses: GPL 2+ GPL 3+
Synopsis: Rank-Based Test to Evaluate a Surrogate Marker
Description:

Uses a novel rank-based nonparametric approach to evaluate a surrogate marker in a small sample size setting. Details are described in Parast et al (2024) <doi:10.1093/biomtc/ujad035>.

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