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ruby-subprocess 1.5.6
Channel: guix
Location: gnu/packages/ruby.scm (gnu packages ruby)
Home page: https://github.com/stripe/subprocess
Licenses: Expat
Synopsis: Ruby library to control and communicate with spawned processes
Description:

This Ruby library is controlling and communicating with spawned processes. It is designed after Python's subprocess module.

ruby-bio-logger 1.0.1
Propagated dependencies: ruby-log4r@1.1.10
Channel: guix
Location: gnu/packages/ruby.scm (gnu packages ruby)
Home page: https://github.com/pjotrp/bioruby-logger-plugin
Licenses: Expat
Synopsis: Log4r wrapper for Ruby
Description:

Bio-logger is a wrapper around Log4r adding extra logging features such as filtering and fine grained logging.

r-rvaidememoire 0.9-83-11
Propagated dependencies: r-vegan@2.6-10 r-pspearman@0.3-1 r-pls@2.8-5 r-nnet@7.3-20 r-mass@7.3-65 r-lme4@1.1-37 r-factominer@2.11 r-car@3.1-3 r-boot@1.3-31 r-ade4@1.7-23
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=RVAideMemoire
Licenses: GPL 2
Synopsis: Testing and Plotting Procedures for Biostatistics
Description:

This package contains miscellaneous functions useful in biostatistics, mostly univariate and multivariate testing procedures with a special emphasis on permutation tests. Many functions intend to simplify user's life by shortening existing procedures or by implementing plotting functions that can be used with as many methods from different packages as possible.

r-riboprofiling 1.38.0
Propagated dependencies: r-biocgenerics@0.54.0 r-biostrings@2.76.0 r-data-table@1.17.2 r-genomeinfodb@1.44.0 r-genomicalignments@1.44.0 r-genomicfeatures@1.60.0 r-genomicranges@1.60.0 r-ggbio@1.56.0 r-ggplot2@3.5.2 r-iranges@2.42.0 r-plyr@1.8.9 r-reshape2@1.4.4 r-rsamtools@2.24.0 r-rtracklayer@1.68.0 r-s4vectors@0.46.0 r-sqldf@0.4-11
Channel: guix
Location: gnu/packages/bioconductor.scm (gnu packages bioconductor)
Home page: https://bioconductor.org/packages/RiboProfiling/
Licenses: GPL 3
Synopsis: Ribosome profiling data analysis
Description:

Starting with a BAM file, this package provides the necessary functions for quality assessment, read start position recalibration, the counting of genomic sequence reads on CDS, 3'UTR, and 5'UTR, and plotting of count data: pairs, log fold-change, codon frequency and coverage assessment, principal component analysis on codon coverage.

rust-sqlx-mysql 0.7.4
Channel: lauras-channel
Location: laura/packages/rust-common.scm (laura packages rust-common)
Home page: https://github.com/launchbadge/sqlx
Licenses: Expat ASL 2.0
Synopsis: MySQL driver implementation for SQLx. Not for direct use; see the `sqlx` crate for details
Description:

This package provides MySQL driver implementation for SQLx. Not for direct use; see the `sqlx` crate for details.

r-multilevelpsa 1.3.0
Propagated dependencies: r-xtable@1.8-4 r-reshape@0.8.9 r-psych@2.5.3 r-psagraphics@2.1.3 r-plyr@1.8.9 r-party@1.3-18 r-mass@7.3-65 r-ggplot2@3.5.2
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://jbryer.github.io/multilevelPSA/
Licenses: GPL 2+
Synopsis: Multilevel Propensity Score Analysis
Description:

Conducts and visualizes propensity score analysis for multilevel, or clustered data. Bryer & Pruzek (2011) <doi:10.1080/00273171.2011.636693>.

r-plumberdeploy 0.2.1
Propagated dependencies: r-ssh@0.9.4 r-lifecycle@1.0.4 r-jsonlite@2.0.0 r-analogsea@1.0.7.2
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/meztez/plumberDeploy
Licenses: Expat
Synopsis: Plumber Deployment
Description:

Gives the ability to automatically deploy a plumber API from R functions on DigitalOcean and other cloud-based servers.

r-periodictable 0.1.2
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=PeriodicTable
Licenses: GPL 2+ GPL 3+
Synopsis: Periodic Table of the Elements
Description:

This package provides a dataset containing properties for chemical elements. Helper functions are also provided to access some atomic properties.

r-twostepclogit 1.2.6
Propagated dependencies: r-survival@3.8-3
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=TwoStepCLogit
Licenses: GPL 2
Synopsis: Conditional Logistic Regression: A Two-Step Estimation Method
Description:

Conditional logistic regression with longitudinal follow up and individual-level random coefficients: A stable and efficient two-step estimation method.

r-alabaster-sfe 1.0.0
Propagated dependencies: r-xml2@1.3.8 r-terra@1.8-50 r-summarizedexperiment@1.38.1 r-spdep@1.3-11 r-spatialreg@1.3-6 r-spatialfeatureexperiment@1.10.1 r-singlecellexperiment@1.30.1 r-sfarrow@0.4.1 r-s4vectors@0.46.0 r-rbioformats@1.8.0 r-jsonlite@2.0.0 r-ebimage@4.50.0 r-alabaster-spatial@1.8.0 r-alabaster-sce@1.8.0 r-alabaster-base@1.8.0
Channel: guix-bioc
Location: guix-bioc/packages/a.scm (guix-bioc packages a)
Home page: https://pachterlab.github.io/alabaster.sfe/
Licenses: Expat
Synopsis: Language agnostic on disk serialization of SpatialFeatureExperiment
Description:

Builds upon the existing ArtifactDB project, expending alabaster.spatial for language agnostic on disk serialization of SpatialFeatureExperiment.

r-mirintegrator 1.38.0
Propagated dependencies: r-rontotools@2.36.0 r-rgraphviz@2.52.0 r-org-hs-eg-db@3.21.0 r-graph@1.86.0 r-ggplot2@3.5.2 r-annotationdbi@1.70.0
Channel: guix-bioc
Location: guix-bioc/packages/m.scm (guix-bioc packages m)
Home page: http://datad.github.io/mirIntegrator/
Licenses: GPL 3+
Synopsis: Integrating microRNA expression into signaling pathways for pathway analysis
Description:

This package provides tools for augmenting signaling pathways to perform pathway analysis of microRNA and mRNA expression levels.

rust-sqlx-mysql 0.7.4
Channel: guix
Location: gnu/packages/crates-database.scm (gnu packages crates-database)
Home page: https://github.com/launchbadge/sqlx
Licenses: Expat ASL 2.0
Synopsis: MySQL driver implementation for SQLx
Description:

This package provides MySQL driver implementation for SQLx. Not for direct use; see the `sqlx` crate for details.

rust-fast-srgb8 1.0.0
Channel: guix
Location: gnu/packages/crates-graphics.scm (gnu packages crates-graphics)
Home page: https://github.com/thomcc/fast-srgb8
Licenses: Expat ASL 2.0 CC0
Synopsis: Conversions between linear float and 8-bit @code{sRGB}
Description:

This package provides very fast conversions between linear float and 8-bit sRGB (with no_std support).

rust-etherparse 0.9.0
Channel: guix
Location: gnu/packages/crates-io.scm (gnu packages crates-io)
Home page: https://github.com/JulianSchmid/etherparse
Licenses: Expat ASL 2.0
Synopsis: Library for parsing & writing a bunch of packet based protocols
Description:

This package provides a library for parsing & writing a bunch of packet based protocols (EthernetII, IPv4, IPv6, UDP, TCP ...).

rust-public-api 0.32.0
Channel: guix
Location: gnu/packages/crates-io.scm (gnu packages crates-io)
Home page: https://github.com/Enselic/cargo-public-api/tree/main/public-api
Licenses: Expat
Synopsis: List diff public API of Rust library crates
Description:

List and diff the public API of Rust library crates. Relies on rustdoc JSON output from the nightly toolchain.

rust-public-api 0.33.1
Channel: guix
Location: gnu/packages/crates-io.scm (gnu packages crates-io)
Home page: https://github.com/Enselic/cargo-public-api/tree/main/public-api
Licenses: Expat
Synopsis: List diff public API of Rust library crates
Description:

List and diff the public API of Rust library crates. Relies on rustdoc JSON output from the nightly toolchain.

rust-etherparse 0.13.0
Channel: guix
Location: gnu/packages/crates-io.scm (gnu packages crates-io)
Home page: https://github.com/JulianSchmid/etherparse
Licenses: Expat ASL 2.0
Synopsis: Library for parsing & writing a bunch of packet based protocols
Description:

This package provides a library for parsing & writing a bunch of packet based protocols (EthernetII, IPv4, IPv6, UDP, TCP ...).

rust-indoc-impl 0.3.6
Channel: guix
Location: gnu/packages/crates-io.scm (gnu packages crates-io)
Home page: https://github.com/dtolnay/indoc
Licenses: Expat ASL 2.0
Synopsis: Macros for @code{rust-indoc}
Description:

This package provides macros for use with the rust-indoc package. It is obsolete for indoc versions > 1.

python-rchitect 0.4.7
Propagated dependencies: python-cffi@1.17.1 python-packaging@24.2 python-six@1.16.0
Channel: guix
Location: gnu/packages/statistics.scm (gnu packages statistics)
Home page: https://github.com/randy3k/rchitect
Licenses: Expat
Synopsis: Mapping R API to Python
Description:

rchitect provides access to R functionality from Python. Its main use is as the driver for radian, the R console.

r-recordlinkage 0.4-12.4
Propagated dependencies: r-xtable@1.8-4 r-rsqlite@2.3.11 r-rpart@4.1.24 r-nnet@7.3-20 r-ipred@0.9-15 r-ff@4.5.2 r-evd@2.3-7.1 r-e1071@1.7-16 r-dbi@1.2.3 r-data-table@1.17.2 r-ada@2.0-5
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=RecordLinkage
Licenses: GPL 2+
Synopsis: Record Linkage Functions for Linking and Deduplicating Data Sets
Description:

This package provides functions for linking and deduplicating data sets. Methods based on a stochastic approach are implemented as well as classification algorithms from the machine learning domain. For details, see our paper "The RecordLinkage Package: Detecting Errors in Data" Sariyar M / Borg A (2010) <doi:10.32614/RJ-2010-017>.

rust-path-dedot 3.1.1
Channel: lauras-channel
Location: laura/packages/rust-common.scm (laura packages rust-common)
Home page: https://magiclen.org/path-dedot
Licenses: Expat
Synopsis: library for extending `Path` and `PathBuf` in order to parse the path which contains dots.
Description:

This package provides a library for extending `Path` and `PathBuf` in order to parse the path which contains dots.

rust-path-dedot 3.1.1
Channel: glue
Location: glue/packages/mcfly.scm (glue packages mcfly)
Home page: https://magiclen.org/path-dedot
Licenses: Expat
Synopsis: library for extending `Path` and `PathBuf` in order to parse the path which contains dots.
Description:

This package provides a library for extending `Path` and `PathBuf` in order to parse the path which contains dots.

r-aalenjohansen 1.0
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://cran.r-project.org/package=AalenJohansen
Licenses: GPL 2+
Synopsis: Conditional Aalen-Johansen Estimation
Description:

This package provides the conditional Nelson-Aalen and Aalen-Johansen estimators. The methods are based on Bladt & Furrer (2023), in preparation.

r-didforbigdata 1.0
Propagated dependencies: r-sandwich@3.1-1 r-data-table@1.17.2
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://setzler.github.io/DiDforBigData/
Licenses: Expat
Synopsis: Big Data Implementation of Difference-in-Differences Estimation with Staggered Treatment
Description:

This package provides a big-data-friendly and memory-efficient difference-in-differences estimator for staggered (and non-staggered) treatment contexts.

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