This package provides actionable code coverage reports for Ruby projects. It has very little overhead and can be easily integrated with development tools to catch coverage problems early.
This package provides a package to extract RCS information and use it in a LaTeX document. For users of LaTeX2HTML, rcsinfo.perl
is included.
RATeX is a newly developed bundle of packages and classes provided for German lawyers. Now in the early beginning it only contains rtklage
, a class to make lawsuits.
The package provides the Raleway family in an easy to use way. For XeLaTeX and LuaLaTeX users the original OpenType fonts are used. The entire font family is included.
This package provides the official administrative boundaries of the Azores (Região Autónoma dos Açores (RAA)) as defined in the 2024 edition of the Carta Administrativa Oficial de Portugal (CAOP), published by the Direção-Geral do Território (DGT). The package includes convenience functions to import these boundaries as sf objects for spatial analysis in R. Source: <https://geo2.dgterritorio.gov.pt/caop/CAOP_RAA_2024-gpkg.zip>.
rGenomeTracks
package leverages the power of pyGenomeTracks
software with the interactivity of R. pyGenomeTracks
is a python software that offers robust method for visualizing epigenetic data files like narrowPeak
, Hic matrix, TADs and arcs, however though, here is no way currently to use it within R interactive session. rGenomeTracks
wrapped the whole functionality of pyGenomeTracks
with additional utilites to make to more pleasant for R users.
Model-based clustering for paired data based on the regression of a mixture of Bayesian hierarchical models on covariates. Zhang et al. (2023) <doi:10.1186/s12859-023-05556-x>.
Evaluate bias and precision in method comparison studies. One provides measurements for each method and it takes care of the estimates. Multiple plots to evaluate bias, precision and compare methods.
It allows the user to determine sample sizes, select probabilistic samples, make estimates of different parameters for the total finite population and in studio domains, using the main design drawings.
An R wrapper for using TooManyCells
', a command line program for clustering, visualizing, and quantifying cell clade relationships. See <https://gregoryschwartz.github.io/too-many-cells/> for more details.
This package provides Water Year Hydrologic Classification Indices based on measured unimpaired runoff (in million acre-feet). Data is provided by California Department of Water Resources and subject to revision.
This package contains the US Census Bureau's 2020 ZCTA to County Relationship File, as well as convenience functions to translate between States, Counties and ZIP Code Tabulation Areas (ZCTAs).
This single-character font is provided as Metafont source, and in Adobe Type 1 format. It is accompanied by a trivial LaTeX package to use the logo at various sizes.
Inspired by the classic RSA', we developed the improved Generalized Reporter Score-based Analysis (GRSA) method, implemented in the R package ReporterScore
', along with comprehensive visualization methods and pathway databases. GRSA is a threshold-free method that works well with all types of biomedical features, such as genes, chemical compounds, and microbial species. Importantly, the GRSA supports multi-group and longitudinal experimental designs, because of the included multi-group-compatible statistical methods.
JDemetra+ (<https://github.com/jdemetra/jdemetra-app>) is the seasonal adjustment software officially recommended to the members of the European Statistical System and the European System of Central Banks. Seasonal adjustment models performed with JDemetra+ can be stored into workspaces. JWSACruncher (<https://github.com/jdemetra/jwsacruncher/releases>) is a console tool that re-estimates all the multi-processing defined in a workspace and to export the result. rjwsacruncher allows to launch easily the JWSACruncher'.
This package provides a common interface to multiple JSON libraries, including Oj, Yajl, the JSON gem (with C-extensions), the pure-Ruby JSON gem, NSJSONSerialization, gson.rb, JrJackson, and OkJson.
Research of subgroups in random clinical trials with binary outcome and two treatments groups. This is an adaptation of the Jared Foster method (<https://www.ncbi.nlm.nih.gov/pubmed/21815180>).
Bayesian estimation of dynamic conditional correlation GARCH model for multivariate time series volatility (Fioruci, J.A., Ehlers, R.S. and Andrade-Filho, M.G., (2014). <doi:10.1080/02664763.2013.839635>.
Common API for filtering data stored in different data models. Provides multiple filter types and reproducible R code. Works standalone or with shinyCohortBuilder
as the GUI for interactive Shiny apps.
Predict future values with hybrid combinations of Pattern Sequence based Forecasting (PSF), Autoregressive Integrated Moving Average (ARIMA), Empirical Mode Decomposition (EMD) and Ensemble Empirical Mode Decomposition (EEMD) methods based hybrid methods.
MatLab'-Style
Modeling of Optimization Problems with R'. This package provides a set of convenience functions to transform a MatLab'-style
optimization modeling structure to its ROI equivalent.
Implementation of a computationally efficient method for simulating queues with arbitrary arrival and service times. Please see Ebert, Wu, Mengersen & Ruggeri (2020, <doi:10.18637/jss.v095.i05>) for further details.
Presmoothed estimators of survival, density, cumulative and non-cumulative hazard functions with right-censored survival data. For details, see Lopez-de-Ullibarri and Jacome (2013) <doi:10.18637/jss.v054.i11>.
Uses a novel rank-based nonparametric approach to evaluate a surrogate marker in a small sample size setting. Details are described in Parast et al (2024) <doi:10.1093/biomtc/ujad035>.