_            _    _        _         _
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      /\__ \     / /\ \ \\ \ \_/ / /     / / /\ \__
     / /_ \ \   / / /\ \ \\ \___/ /     / / /\ \___\
    / / /\ \ \ / / /  \ \_\\ \ \_/      \ \ \ \/___/
   / / /  \/_// / /   / / / \ \ \        \ \ \
  / / /      / / /   / / /   \ \ \   _    \ \ \
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/_/ /      / / /____\/ /       \ \_\\ \/___/ /
\_\/       \/_________/         \/_/ \_____\/

Enter the query into the form above. You can look for specific version of a package by using @ symbol like this: gcc@10.

API method:

GET /api/packages?search=hello&page=1&limit=20

where search is your query, page is a page number and limit is a number of items on a single page. Pagination information (such as a number of pages and etc) is returned in response headers.

If you'd like to join our channel webring send a patch to ~whereiseveryone/toys@lists.sr.ht adding your channel as an entry in channels.scm.


r-roi-plugin-quadprog 1.0-1
Propagated dependencies: r-slam@0.1-55 r-roi@1.0-1 r-quadprog@1.5-8
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: http://roi.r-forge.r-project.org/
Licenses: GPL 3
Build system: r
Synopsis: 'quadprog' Plug-in for the 'R' Optimization Infrastructure
Description:

Enhances the R Optimization Infrastructure ('ROI') package by registering the quadprog solver. It allows for solving quadratic programming (QP) problems.

r-r2d2ordinal 1.0.2
Propagated dependencies: r-stanheaders@2.32.10 r-rstantools@2.5.0 r-rstan@2.32.7 r-rcppparallel@5.1.11-1 r-rcppeigen@0.3.4.0.2 r-rcpp@1.1.0 r-laplacesdemon@16.1.6 r-gigrvg@0.8 r-extradistr@1.10.0 r-bh@1.87.0-1
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=R2D2ordinal
Licenses: Expat
Build system: r
Synopsis: Implements Pseudo-R2D2 Prior for Ordinal Regression
Description:

This package implements the pseudo-R2D2 prior for ordinal regression from the paper "Pseudo-R2D2 prior for high-dimensional ordinal regression" by Yanchenko (2025) <doi:10.1007/s11222-025-10667-x>. In particular, it provides code to evaluate the probability distribution function for the cut-points, compute the log-likelihood, calculate the hyper-parameters for the global variance parameter, find the distribution of McFadden's coefficient-of-determination, and fit the model in rstan'. Please cite the paper if you use these codes.

r-rfusion 0.1
Propagated dependencies: r-sjmisc@2.8.11 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=rFUSION
Licenses: GPL 3
Build system: r
Synopsis: Interface to FUSION
Description:

Set of functions that enable you to use the FUSION commands (Program available in: <http://forsys.sefs.uw.edu/fusion/fusionlatest.html>).

r-rcmdrplugin-mpastats 1.2.2
Propagated dependencies: r-rcmdr@2.9-5 r-ordinal@2023.12-4.1
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=RcmdrPlugin.MPAStats
Licenses: GPL 3+
Build system: r
Synopsis: R Commander Plug-in for MPA Statistics
Description:

Extends R Commander with a unified menu of new and pre-existing statistical functions related to public management and policy analysis statistics. Functions and menus have been renamed according to the usage in PMGT 630 in the Master of Public Administration program at Brigham Young University.

r-rnaught 0.1.0
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://mi2yorku.github.io/Rnaught/
Licenses: AGPL 3+
Build system: r
Synopsis: Estimate the Basic Reproduction Number (R0)
Description:

This package provides a collection of methods for estimating the basic reproduction number (R0) of infectious diseases. Features a web application to interface with the estimators. Uses the models from: Fisman et al. (2013) <DOI:10.1371/journal.pone.0083622>, Bettencourt and Ribeiro (2008) <DOI:10.1371/journal.pone.0002185>, and White and Pagano (2008) <DOI:10.1002/sim.3136>. Includes datasets for Canadian national and provincial COVID-19 case counts provided by Berry et al. (2021) <DOI:10.1038/s41597-021-00955-2>.

r-rneighborgwas 1.2.5
Propagated dependencies: r-rcppparallel@5.1.11-1 r-matrix@1.7-4 r-gaston@1.6
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=rNeighborGWAS
Licenses: GPL 3
Build system: r
Synopsis: Testing Neighbor Effects in Marker-Based Regressions
Description:

To incorporate neighbor genotypic identity into genome-wide association studies, the package provides a set of functions for variation partitioning and association mapping. The theoretical background of the method is described in Sato et al. (2021) <doi:10.1038/s41437-020-00401-w>.

r-rmpw 0.0.6
Propagated dependencies: r-mass@7.3-65 r-gtools@3.9.5
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=rmpw
Licenses: GPL 2
Build system: r
Synopsis: Causal Mediation Analysis Using Weighting Approach
Description:

We implement causal mediation analysis using the methods proposed by Hong (2010) and Hong, Deutsch & Hill (2015) <doi:10.3102/1076998615583902>. It allows the estimation and hypothesis testing of causal mediation effects through ratio of mediator probability weights (RMPW). This strategy conveniently relaxes the assumption of no treatment-by-mediator interaction while greatly simplifying the outcome model specification without invoking strong distributional assumptions. We also implement a sensitivity analysis by extending the RMPW method to assess potential bias in the presence of omitted pretreatment or posttreatment covariates. The sensitivity analysis strategy was proposed by Hong, Qin, and Yang (2018) <doi:10.3102/1076998617749561>.

r-readroper 0.9.3
Propagated dependencies: r-readr@2.1.6
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=readroper
Licenses: Expat
Build system: r
Synopsis: Simply Read ASCII Single and Multicard Polling Datasets
Description:

This package provides a convenient way to read fixed-width ASCII polling datasets from providers like the Roper Center <https://ropercenter.cornell.edu>.

r-ribiosio 1.1.0
Propagated dependencies: r-ribiosutils@1.7.7
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/bedapub/ribiosIO
Licenses: GPL 3
Build system: r
Synopsis: Input/Output Utilities of the 'ribios' Suite
Description:

This package provides data structures and functions for file input/output in the ribios software suite, supporting common bioinformatics and computational biology file formats, designed for fast loading and high performance with minimal dependencies.

r-rmda 1.6
Propagated dependencies: r-reshape@0.8.10 r-pander@0.6.6 r-mass@7.3-65 r-caret@7.0-1
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: http://mdbrown.github.io/rmda/
Licenses: GPL 2
Build system: r
Synopsis: Risk Model Decision Analysis
Description:

This package provides tools to evaluate the value of using a risk prediction instrument to decide treatment or intervention (versus no treatment or intervention). Given one or more risk prediction instruments (risk models) that estimate the probability of a binary outcome, rmda provides functions to estimate and display decision curves and other figures that help assess the population impact of using a risk model for clinical decision making. Here, "population" refers to the relevant patient population. Decision curves display estimates of the (standardized) net benefit over a range of probability thresholds used to categorize observations as high risk'. The curves help evaluate a treatment policy that recommends treatment for patients who are estimated to be high risk by comparing the population impact of a risk-based policy to "treat all" and "treat none" intervention policies. Curves can be estimated using data from a prospective cohort. In addition, rmda can estimate decision curves using data from a case-control study if an estimate of the population outcome prevalence is available. Version 1.4 of the package provides an alternative framing of the decision problem for situations where treatment is the standard-of-care and a risk model might be used to recommend that low-risk patients (i.e., patients below some risk threshold) opt out of treatment. Confidence intervals calculated using the bootstrap can be computed and displayed. A wrapper function to calculate cross-validated curves using k-fold cross-validation is also provided.

r-rseedcalc 1.3
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=rseedcalc
Licenses: GPL 2
Build system: r
Synopsis: Estimating the Proportion of Genetically Modified Seeds in Seedlots via Multinomial Group Testing
Description:

Estimate the percentage of seeds in a seedlot that contain stacks of genetically modified traits. Estimates are calculated using a multinomial group testing model with maximum likelihood estimation of the parameters.

r-rappsflyer 0.2.0
Propagated dependencies: r-tidyr@1.3.1 r-stringr@1.6.0 r-retry@0.1.1 r-lgr@0.5.0 r-httr@1.4.7 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=rappsflyer
Licenses: Expat
Build system: r
Synopsis: Work with AppsFlyer API
Description:

Loading data from AppsFlyer Pull API <https://support.appsflyer.com/hc/en-us/articles/207034346-Using-Pull-API-aggregate-data>.

r-random-cdisc-data 0.3.16
Propagated dependencies: r-yaml@2.3.10 r-tidyr@1.3.1 r-tibble@3.3.0 r-stringr@1.6.0 r-rlang@1.1.6 r-magrittr@2.0.4 r-lubridate@1.9.4 r-lifecycle@1.0.4 r-dplyr@1.1.4 r-checkmate@2.3.3
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://insightsengineering.github.io/random.cdisc.data/
Licenses: ASL 2.0
Build system: r
Synopsis: Create Random ADaM Datasets
Description:

This package provides a set of functions to create random Analysis Data Model (ADaM) datasets and cached dataset. ADaM dataset specifications are described by the Clinical Data Interchange Standards Consortium (CDISC) Analysis Data Model Team.

r-rfisheries 0.2
Propagated dependencies: r-rjson@0.2.23 r-httr@1.4.7 r-ggplot2@4.0.1 r-data-table@1.17.8 r-assertthat@0.2.1
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: http://www.github.com/ropensci/rfisheries
Licenses: Expat
Build system: r
Synopsis: 'Programmatic Interface to the 'openfisheries.org' API'
Description:

This package provides a programmatic interface to openfisheries.org'. This package is part of the rOpenSci suite (http://ropensci.org).

r-rsubgroup 1.1
Dependencies: openjdk@25
Propagated dependencies: r-rjava@1.0-11 r-foreign@0.8-90
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://rsubgroup.org
Licenses: GPL 3+
Build system: r
Synopsis: Subgroup Discovery and Analytics
Description:

This package provides a collection of efficient and effective tools and algorithms for subgroup discovery and analytics. The package integrates an R interface to the org.vikamine.kernel library of the VIKAMINE system <http://www.vikamine.org> implementing subgroup discovery, pattern mining and analytics in Java.

r-resmush 0.2.2
Propagated dependencies: r-httr2@1.2.1 r-curl@7.0.0 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://dieghernan.github.io/resmush/
Licenses: Expat
Build system: r
Synopsis: Optimize and Compress Image Files with 'reSmush.it'
Description:

Compress local and online images using the reSmush.it API service <https://resmush.it/>.

r-rare 0.1.2
Propagated dependencies: r-rcpparmadillo@15.2.2-1 r-rcpp@1.1.0 r-matrix@1.7-4 r-glmnet@4.1-10
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/yanxht/rare
Licenses: GPL 3
Build system: r
Synopsis: Linear Model with Tree-Based Lasso Regularization for Rare Features
Description:

Implementation of an alternating direction method of multipliers algorithm for fitting a linear model with tree-based lasso regularization, which is proposed in Algorithm 1 of Yan and Bien (2020) <doi:10.1080/01621459.2020.1796677>. The package allows efficient model fitting on the entire 2-dimensional regularization path for large datasets. The complete set of functions also makes the entire process of tuning regularization parameters and visualizing results hassle-free.

r-rising 0.1.0
Propagated dependencies: r-rcppeigen@0.3.4.0.2 r-rcpp@1.1.0 r-data-table@1.17.8
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=rIsing
Licenses: GPL 2+
Build system: r
Synopsis: High-Dimensional Ising Model Selection
Description:

Fits an Ising model to a binary dataset using L1 regularized logistic regression and extended BIC. Also includes a fast lasso logistic regression function for high-dimensional problems. Uses the libLBFGS optimization library by Naoaki Okazaki.

r-rankcorr 1.0.3
Propagated dependencies: r-rms@8.1-0 r-rankicc@1.0.2
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=rankCorr
Licenses: GPL 2+
Build system: r
Synopsis: Total, Between-, and Within-Cluster Spearman Rank Correlations for Clustered Data
Description:

Estimates the total, between-, and within-cluster Spearman rank correlations for continuous and ordinal clustered data. See Tu et al. (2024) <DOI:10.1002/sim.10326> for details.

r-rinsp 1.2.5
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=RInSp
Licenses: GPL 2+
Build system: r
Synopsis: R Individual Specialization
Description:

This package provides functions to calculate several ecological indices of individual and population niche width (Araujo's E, clustering and pairwise similarity among individuals, IS, Petraitis W, and Roughgarden's WIC/TNW) to assess individual specialization based on data of resource use. Resource use can be quantified by counts of categories, measures of mass or length, or proportions. Monte Carlo resampling procedures are available for hypothesis testing against multinomial null models. Details are provided in Zaccarelli et al. (2013) <doi:10.1111/2041-210X.12079> and associated references.

r-rrcovhd 0.3-1
Propagated dependencies: r-spls@2.3-2 r-rrcov@1.7-7 r-robusthd@0.8.4 r-robustbase@0.99-6 r-rcpp@1.1.0 r-pls@2.8-5 r-pcapp@2.0-5
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/valentint/rrcovHD
Licenses: GPL 3+
Build system: r
Synopsis: Robust Multivariate Methods for High Dimensional Data
Description:

Robust multivariate methods for high dimensional data including outlier detection (Filzmoser and Todorov (2013) <doi:10.1016/j.ins.2012.10.017>), robust sparse PCA (Croux et al. (2013) <doi:10.1080/00401706.2012.727746>, Todorov and Filzmoser (2013) <doi:10.1007/978-3-642-33042-1_31>), robust PLS (Todorov and Filzmoser (2014) <doi:10.17713/ajs.v43i4.44>), and robust sparse classification (Ortner et al. (2020) <doi:10.1007/s10618-019-00666-8>).

r-roauth 0.9.6
Propagated dependencies: r-rcurl@1.98-1.17 r-digest@0.6.39
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=ROAuth
Licenses: Artistic License 2.0
Build system: r
Synopsis: R Interface For OAuth
Description:

This package provides an interface to the OAuth 1.0 specification allowing users to authenticate via OAuth to the server of their choice.

r-richcluster 1.0.2
Propagated dependencies: r-viridis@0.6.5 r-tidyr@1.3.1 r-rcpp@1.1.0 r-plotly@4.11.0 r-networkd3@0.4.1 r-magrittr@2.0.4 r-iheatmapr@0.7.1 r-igraph@2.2.1 r-heatmaply@1.6.0 r-fields@17.1 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/hurlab/richCluster
Licenses: GPL 3
Build system: r
Synopsis: Fast, Robust Clustering Algorithms for Gene Enrichment Data
Description:

Fast C++ agglomerative hierarchical clustering algorithm packaged into easily callable R functions, designed to help cluster biological terms based on how similar of genes are expressed in their activation.

r-recastlessons 0.1.0
Propagated dependencies: r-rlang@1.1.6 r-purrr@1.2.0 r-magrittr@2.0.4 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=recastlessons
Licenses: Expat
Build system: r
Synopsis: Explore and Interactively Adjust a Daily Distribution of Lessons
Description:

This package provides a set of functions to see and interactively adjust a distribution of lessons by day, aiming at homogenizing individual distributions (for each class and teacher).

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Total results: 69112