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r-tcgamethylation450k 1.46.0
Channel: guix-bioc
Location: guix-bioc/packages/t.scm (guix-bioc packages t)
Home page: https://bioconductor.org/packages/TCGAMethylation450k
Licenses: GPL 2
Build system: r
Synopsis: The Cancer Genome Atlas Illumina 450k methylation example data
Description:

The Cancer Genome Atlas (TCGA) is applying genomics technologies to over 20 different types of cancer. This package contains a small set of 450k array data in idat format.

r-epistemicgametheory 0.1.2
Propagated dependencies: r-lpsolve@5.6.23
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://cran.r-project.org/package=EpistemicGameTheory
Licenses: GPL 3
Build system: r
Synopsis: Constructing an Epistemic Model for the Games with Two Players
Description:

Constructing an epistemic model such that, for every player i and for every choice c(i) which is optimal, there is one type that expresses common belief in rationality.

r-measurementprotocol 0.1.1
Propagated dependencies: r-rappdirs@0.3.3 r-jsonlite@2.0.0 r-httr@1.4.7 r-cli@3.6.5 r-assertthat@0.2.1
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://code.markedmondson.me/measurementProtocol/
Licenses: Expat
Build system: r
Synopsis: Send Data from R to the Measurement Protocol
Description:

Send server-side tracking data from R. The Measurement Protocol version 2 <https://developers.google.com/analytics/devguides/collection/protocol/ga4> allows sending HTTP tracking events from R code.

r-peopleanalyticsdata 0.2.1
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: http://peopleanalytics-regression-book.org
Licenses: Expat
Build system: r
Synopsis: Data Sets for Keith McNulty's Handbook of Regression Modeling in People Analytics
Description:

Data sets for statistical inference modeling related to People Analytics. Contains various data sets from the book Handbook of Regression Modeling in People Analytics by Keith McNulty (2020).

ruby-uniform-notifier 1.13.2
Channel: gn-bioinformatics
Location: gn/packages/ruby.scm (gn packages ruby)
Home page: https://rubygems.org/gems/uniform_notifier
Licenses: Expat
Build system: ruby
Synopsis: Uniform notifier for rails logger
Description:

uniform_notifier is extracted from bullet, it gives you the ability to send notification through rails logger, customized logger, javascript alert, javascript console, growl, xmpp, airbrake and honeybadger.

r-independenceweights 0.0.1
Propagated dependencies: r-osqp@0.6.3.3 r-locfit@1.5-9.12
Channel: guix-cran
Location: guix-cran/packages/i.scm (guix-cran packages i)
Home page: https://cran.r-project.org/package=independenceWeights
Licenses: Expat
Build system: r
Synopsis: Estimates Weights for Confounding Control for Continuous-Valued Exposures
Description:

Estimates weights to make a continuous-valued exposure statistically independent of a vector of pre-treatment covariates using the method proposed in Huling, Greifer, and Chen (2021) <arxiv:2107.07086>.

sbcl-cl-random-forest 0.1-1.fedb36c
Dependencies: sbcl-alexandria@1.4-0.009b7e5 sbcl-cl-libsvm-format@0.1.0-0.3300f84 sbcl-cl-online-learning@0.5-1.87fbef8 sbcl-lparallel@2.8.4-1.80fc295
Channel: guix
Location: gnu/packages/lisp-xyz.scm (gnu packages lisp-xyz)
Home page: https://github.com/masatoi/cl-random-forest
Licenses: Expat
Build system: asdf/sbcl
Synopsis: Random Forest and Global Refinement for Common Lisp
Description:

CL-random-forest is an implementation of Random Forest for multiclass classification and univariate regression written in Common Lisp. It also includes an implementation of Global Refinement of Random Forest.

r-spatialomicsoverlay 1.10.0
Propagated dependencies: r-xml@3.99-0.20 r-stringr@1.6.0 r-scattermore@1.2 r-s4vectors@0.48.0 r-readxl@1.4.5 r-rbioformats@1.10.0 r-plotrix@3.8-13 r-pbapply@1.7-4 r-magick@2.9.0 r-ggtext@0.1.2 r-ggplot2@4.0.1 r-geomxtools@3.14.0 r-ebimage@4.52.0 r-dplyr@1.1.4 r-data-table@1.17.8 r-biocfilecache@3.0.0 r-biobase@2.70.0 r-base64enc@0.1-3
Channel: guix-bioc
Location: guix-bioc/packages/s.scm (guix-bioc packages s)
Home page: https://bioconductor.org/packages/SpatialOmicsOverlay
Licenses: Expat
Build system: r
Synopsis: Spatial Overlay for Omic Data from Nanostring GeoMx Data
Description:

This package provides tools for NanoString Technologies GeoMx Technology. Package to easily graph on top of an OME-TIFF image. Plotting annotations can range from tissue segment to gene expression.

r-consibiocloudclient 1.0.0
Propagated dependencies: r-magrittr@2.0.4 r-httr2@1.2.1
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://cran.r-project.org/package=consibiocloudclient
Licenses: Expat
Build system: r
Synopsis: Client for the 'Consibio Cloud' API
Description:

Enable seamless interaction with Consibio Cloud <https://consibio.cloud> API <https://api.v2.consibio.com/api-docs/>. This package provides tools to query data from resources like projects, elements, devices, and datalogs.

r-mazamalocationutils 0.4.4
Propagated dependencies: r-tidygeocoder@1.0.6 r-stringr@1.6.0 r-rlang@1.1.6 r-readr@2.1.6 r-mazamaspatialutils@0.8.7 r-mazamacoreutils@0.6.0 r-magrittr@2.0.4 r-lubridate@1.9.4 r-leaflet@2.2.3 r-jsonlite@2.0.0 r-httr@1.4.7 r-geodist@0.1.1 r-dplyr@1.1.4 r-cluster@2.1.8.1
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://github.com/MazamaScience/MazamaLocationUtils
Licenses: GPL 3
Build system: r
Synopsis: Manage Spatial Metadata for Known Locations
Description:

Utility functions for discovering and managing metadata associated with spatially unique "known locations". Applications include all fields of environmental monitoring (e.g. air and water quality) where data are collected at stationary sites.

r-tenet-annotationhub 1.1.0
Propagated dependencies: r-genomicranges@1.62.0 r-annotationhub@4.0.0
Channel: guix-bioc
Location: guix-bioc/packages/t.scm (guix-bioc packages t)
Home page: https://github.com/rhielab/TENET.AnnotationHub
Licenses: GPL 2
Build system: r
Synopsis: Annotation data for the TENET package
Description:

AnnotationHub package containing datasets for use in the TENET package. Includes GenomicRanges objects representing putative enhancer, promoter, and open chromatin regions. All included datasets are aligned to the hg38 human genome.

go-github-com-rs-cors 1.11.1
Channel: guix
Location: gnu/packages/golang-web.scm (gnu packages golang-web)
Home page: https://github.com/rs/cors
Licenses: Expat
Build system: go
Synopsis: Golang @code{net/http} configurable handler for CORS requests
Description:

Package cors is net/http handler to handle Cross-origin resource sharing related requests as defined by http://www.w3.org/TR/cors/.

texlive-babel-russian 2025.2
Channel: guix
Location: gnu/packages/tex.scm (gnu packages tex)
Home page: https://ctan.org/pkg/babel-russian
Licenses: LPPL 1.3c
Build system: texlive
Synopsis: Russian language module for Babel
Description:

The package provides support for use of Babel in documents written in Russian (in both traditional and modern forms). The support is adapted for use both under traditional TeX engines, and under XeTeX and LuaTeX.

r-hthgu133pluspmprobe 2.18.0
Propagated dependencies: r-annotationdbi@1.72.0
Channel: guix-bioc
Location: guix-bioc/packages/h.scm (guix-bioc packages h)
Home page: https://bioconductor.org/packages/hthgu133pluspmprobe
Licenses: LGPL 2.0+
Build system: r
Synopsis: Probe sequence data for microarrays of type hthgu133pluspm
Description:

This package was automatically created by package AnnotationForge version 1.11.21. The probe sequence data was obtained from http://www.affymetrix.com. The file name was HT\_HG-U133\_Plus\_PM\_probe\_tab.

r-incidenceprevalence 1.2.1
Channel: guix-cran
Location: guix-cran/packages/i.scm (guix-cran packages i)
Home page: https://darwin-eu.github.io/IncidencePrevalence/
Licenses: FSDG-compatible
Build system: r
Synopsis: Estimate Incidence and Prevalence using the OMOP Common Data Model
Description:

Calculate incidence and prevalence using data mapped to the Observational Medical Outcomes Partnership (OMOP) common data model. Incidence and prevalence can be estimated for the total population in a database or for a stratification cohort.

r-temperatureresponse 0.2
Propagated dependencies: r-rootsolve@1.8.2.4 r-numderiv@2016.8-1.1 r-minpack-lm@1.2-4 r-dplyr@1.1.4 r-broom@1.0.10 r-aiccmodavg@2.3-4
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/low-decarie/temperatureresponse
Licenses: GPL 3
Build system: r
Synopsis: Temperature Response
Description:

Fits temperature response models to rate measurements taken at different temperatures. Etienne Low-Decarie,Tobias G. Boatman, Noah Bennett,Will Passfield,Antonio Gavalas-Olea,Philipp Siegel, Richard J. Geider (2017) <doi:10.1002/ece3.3576> .

r-cpncoverageanalysis 1.1.0
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://cran.r-project.org/package=CPNCoverageAnalysis
Licenses: GPL 3+
Build system: r
Synopsis: Conceptual Properties Norming Studies as Parameter Estimation
Description:

Implementation of conceptual properties norming studies, including estimates of CPNs parameters with their corresponding variances and estimates for the sampling process, and a sampling property function based on a modified empirical distribution from the original data.

r-trustedtimestamping 0.2.6
Propagated dependencies: r-jsonlite@2.0.0 r-httr@1.4.7 r-digest@0.6.39
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=trustedtimestamping
Licenses: AGPL 3
Build system: r
Synopsis: Create Trusted Timestamps of Datasets and Files
Description:

Trusted Timestamps (tts) are created by incorporating a hash of a file or dataset into a transaction on the decentralized blockchain (Stellar network). The package makes use of a free service provided by <https://stellarapi.io>.

r-rcppclassicexamples 0.1.4
Propagated dependencies: r-rcppclassic@0.9.14 r-rcpp@1.1.0
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/eddelbuettel/rcppclassicexamples
Licenses: GPL 2+
Build system: r
Synopsis: Examples using 'RcppClassic' to Interface R and C++
Description:

The Rcpp package contains a C++ library that facilitates the integration of R and C++ in various ways via a rich API. This API was preceded by an earlier version which has been deprecated since 2010 (but is still supported to provide backwards compatibility in the package RcppClassic'). This package RcppClassicExamples provides usage examples for the older, deprecated API. There is also a corresponding package RcppExamples with examples for the newer, current API which we strongly recommend as the basis for all new development.

python-requests-cache 1.2.1
Propagated dependencies: python-attrs@25.3.0 python-boto3@1.40.61 python-bson@0.5.10 python-cattrs@24.1.2 python-itsdangerous@2.2.0 python-orjson@3.9.7 python-platformdirs@4.3.6 python-pymongo@4.14.0 python-pyyaml@6.0.2 python-redis@5.2.0 python-requests@2.32.5 python-ujson@5.10.0 python-url-normalize@2.2.1 python-urllib3@2.5.0
Channel: guix
Location: gnu/packages/python-web.scm (gnu packages python-web)
Home page: https://github.com/requests-cache/requests-cache
Licenses: FreeBSD
Build system: pyproject
Synopsis: Persistent HTTP cache for Python requests
Description:

This package provides a drop-in replacement for requests.Session with caching offload to SQLite, Redis, MongoDB and AWS DynamoDB or save responses as planin JSON/YAML file or save responses as plain JSON/YAML files.

r-chimphumanbraindata 1.48.0
Channel: guix-bioc
Location: guix-bioc/packages/c.scm (guix-bioc packages c)
Home page: https://bioconductor.org/packages/ChimpHumanBrainData
Licenses: Expat
Build system: r
Synopsis: Chimp and human brain data package
Description:

This data package contains chimp and human brain data extracted from the ArrayExpress accession E-AFMX-2. Both human and chimp RNAs were run on human hgu95av2 Affymetrix arrays. It is a useful dataset for tutorials.

r-assertive-datetimes 0.0-3
Propagated dependencies: r-assertive-base@0.0-9 r-assertive-types@0.0-3
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://bitbucket.org/richierocks/assertive.datetimes
Licenses: GPL 3+
Build system: r
Synopsis: Assertions to check properties of dates and times
Description:

This package provides a set of predicates and assertions for checking the properties of dates and times. This is mainly for use by other package developers who want to include run-time testing features in their own packages.

r-mrtsamplesizebinary 0.1.2
Propagated dependencies: r-matrix@1.7-4 r-ggplot2@4.0.1
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://cran.r-project.org/package=MRTSampleSizeBinary
Licenses: GPL 3
Build system: r
Synopsis: Sample Size Calculator for MRT with Binary Outcomes
Description:

This package provides a sample size calculator for micro-randomized trials (MRTs) with binary outcomes based on Cohn et al. (2023) <doi:10.1002/sim.9748>. Also provides a power calculator when the sample size is input by the user.

r-metaboliteidmapping 1.0.0
Propagated dependencies: r-annotationhub@4.0.0
Channel: guix-bioc
Location: guix-bioc/packages/m.scm (guix-bioc packages m)
Home page: https://github.com/yigbt/metaboliteIDmapping
Licenses: GPL 3
Build system: r
Synopsis: Mapping of Metabolite IDs from Different Sources
Description:

The package provides a comprehensive mapping table of nine different Metabolite ID formats and their common name. The data has been collected and merged from four publicly available source, including HMDB, Comptox Dashboard, ChEBI, and the graphite Bioconductor R package.

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