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python-sphinxext-rediraffe 0.2.7
Propagated dependencies: python-sphinx@6.2.1
Channel: guix
Location: gnu/packages/sphinx.scm (gnu packages sphinx)
Home page: https://github.com/wpilibsuite/sphinxext-rediraffe
Licenses: Expat
Synopsis: Sphinx Extension that redirects non-existent pages to working pages
Description:

This sphinx extension redirects non-existent pages to working pages. Rediraffe can also check that deleted/renamed files in your git repo are redirected.

emacs-sly-named-readtables 0.1-1.a5a4267
Propagated dependencies: emacs-sly@1.0.43-9.9c43bf6
Channel: guix
Location: gnu/packages/emacs-xyz.scm (gnu packages emacs-xyz)
Home page: https://github.com/joaotavora/sly-named-readtables
Licenses: GPL 3+
Synopsis: Named-readtables support for SLY
Description:

sly-named-readtables is an external contrib for SLY that enables different readtables to be active in different parts of the same file.

specification-runtime-spec 1.2.0
Channel: guix
Location: gnu/packages/specifications.scm (gnu packages specifications)
Home page: https://opencontainers.org/
Licenses: ASL 2.0
Synopsis: OCI Runtime Specification
Description:

The Open Container Initiative develops specifications for standards on Operating System process and application containers. This package provides documentation, schemas and source of Golang module.

r-huexexonprobesetlocation 1.15.0
Propagated dependencies: r-annotationdbi@1.70.0
Channel: guix-bioc
Location: guix-bioc/packages/h.scm (guix-bioc packages h)
Home page: https://bioconductor.org/packages/HuExExonProbesetLocation
Licenses: LGPL 2.0+
Synopsis: Probe sequence data for microarrays of type HuEx
Description:

This package was automatically created by package AnnotationForge version 1.7.17. The exon-level probeset genome location was retrieved from Netaffx using AffyCompatible.

r-moexexonprobesetlocation 1.15.0
Propagated dependencies: r-annotationdbi@1.70.0
Channel: guix-bioc
Location: guix-bioc/packages/m.scm (guix-bioc packages m)
Home page: https://bioconductor.org/packages/MoExExonProbesetLocation
Licenses: LGPL 2.0+
Synopsis: Probe sequence data for microarrays of type MoEx
Description:

This package was automatically created by package AnnotationForge version 1.7.17. The exon-level probeset genome location was retrieved from Netaffx using AffyCompatible.

r-genomictools-filehandler 0.1.5.9
Propagated dependencies: r-snpstats@1.58.0 r-data-table@1.17.4
Channel: guix-cran
Location: guix-cran/packages/g.scm (guix-cran packages g)
Home page: https://cran.r-project.org/package=GenomicTools.fileHandler
Licenses: GPL 2+
Synopsis: File Handlers for Genomic Data Analysis
Description:

This package provides a collection of I/O tools for handling the most commonly used genomic datafiles, like fasta/-q, bed, gff, gtf, ped/map and vcf.

r-bsgenome-gmax-ncbi-gmv40 4.0
Propagated dependencies: r-bsgenome@1.76.0
Channel: guix-bioc
Location: guix-bioc/packages/b.scm (guix-bioc packages b)
Home page: https://bioconductor.org/packages/BSgenome.Gmax.NCBI.Gmv40
Licenses: FSDG-compatible
Synopsis: Full genome sequences for Glycine max (Gmv40)
Description:

Full genome sequences for Glycine max as provided by NCBI (assembly Glycine_max_v4.0, assembly accession GCF_000004515.5) and stored in Biostrings objects.

r-multivariaterandomforest 1.1.5
Propagated dependencies: r-rcpp@1.0.14 r-bootstrap@2019.6
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://cran.r-project.org/package=MultivariateRandomForest
Licenses: GPL 2+
Synopsis: Models Multivariate Cases Using Random Forests
Description:

Models and predicts multiple output features in single random forest considering the linear relation among the output features, see details in Rahman et al (2017)<doi:10.1093/bioinformatics/btw765>.

r-visualize-cran-downloads 1.0.3
Propagated dependencies: r-plotly@4.10.4 r-htmlwidgets@1.6.4 r-cranlogs@2.1.1
Channel: guix-cran
Location: guix-cran/packages/v.scm (guix-cran packages v)
Home page: https://github.com/mponce0/Visualize.CRAN.Downloads
Licenses: GPL 2+
Synopsis: Visualize Downloads from 'CRAN' Packages
Description:

Visualize the trends and historical downloads from packages in the CRAN repository. Data is obtained by using the API to query the database from the RStudio CRAN mirror.

r-plasmodiumanophelesprobe 2.18.0
Propagated dependencies: r-annotationdbi@1.70.0
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://bioconductor.org/packages/plasmodiumanophelesprobe
Licenses: LGPL 2.0+
Synopsis: Probe sequence data for microarrays of type plasmodiumanopheles
Description:

This package was automatically created by package AnnotationForge version 1.11.21. The probe sequence data was obtained from http://www.affymetrix.com. The file name was Plasmodium\_Anopheles\_probe\_tab.

r-mplusparallel-automation 0.0.1.1
Propagated dependencies: r-mplusautomation@1.2 r-future@1.49.0 r-furrr@0.3.1 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://cran.r-project.org/package=mplusParallel.automation
Licenses: GPL 3
Synopsis: Parallel Processing Automation for 'Mplus'
Description:

Offers automation tools to parallelize Mplus operations when using R for data generation. It facilitates streamlined integration between Mplus and R', allowing users to run and manage multiple Mplus models simultaneously and efficiently in R'.

perl-net-dns-resolver-mock 1.20171219
Dependencies: perl-net-dns@1.50
Channel: guix
Location: gnu/packages/networking.scm (gnu packages networking)
Home page: https://metacpan.org/release/Net-DNS-Resolver-Mock
Licenses: GPL 1+
Synopsis: Mock DNS Resolver object for testing
Description:

Net::DNS::Resolver::Mock is a subclass of Net::DNS::Resolver, but returns static data from any provided DNS zone file instead of querying the network. It is intended primarily for use in testing.

r-genomicdistributionsdata 1.16.0
Propagated dependencies: r-genomicranges@1.60.0 r-genomicfeatures@1.60.0 r-genomeinfodb@1.44.0 r-experimenthub@2.16.0 r-ensembldb@2.32.0 r-data-table@1.17.4 r-bsgenome@1.76.0 r-annotationhub@3.16.0 r-annotationfilter@1.32.0
Channel: guix-bioc
Location: guix-bioc/packages/g.scm (guix-bioc packages g)
Home page: https://bioconductor.org/packages/GenomicDistributionsData
Licenses: FreeBSD
Synopsis: Reference data for GenomicDistributions package
Description:

This package provides ready to use reference data for GenomicDistributions package. Raw data was obtained from ensembldb and processed with helper functions. Data files are available for the following genome assemblies: hg19, hg38, mm9 and mm10.

r-phastcons35way-ucsc-mm39 3.16.0
Propagated dependencies: r-genomicscores@2.20.0 r-annotationhub@3.16.0
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://bioconductor.org/packages/phastCons35way.UCSC.mm39
Licenses: Artistic License 2.0
Synopsis: UCSC phastCons mm39 conservation scores AnnotationHub Resource Metadata
Description:

Store UCSC phastCons mm39 conservation scores AnnotationHub Resource Metadata. Provide provenance and citation information for UCSC phastCons mm39 conservation score AnnotationHub resources. Illustrate in a vignette how to access those resources.

texlive-recorder-fingering 2025.2
Channel: guix
Location: gnu/packages/tex.scm (gnu packages tex)
Home page: https://ctan.org/pkg/recorder-fingering
Licenses: LPPL 1.3+
Synopsis: Package to display recorder fingering diagrams
Description:

This package provides support for generating and displaying fingering diagrams for baroque fingering recorders. Standard fingerings are provided for recorders in both C and F, along with methods to create and display alternate fingerings for trills, etc.

java-osgi-service-resolver 1.0.1
Dependencies: java-osgi-annotation@6.0.0 java-osgi-resource@1.0.0
Channel: guix
Location: gnu/packages/java.scm (gnu packages java)
Home page: https://www.osgi.org
Licenses: ASL 2.0
Synopsis: OSGI Resolver service
Description:

OSGi, for Open Services Gateway initiative framework, is a module system and service platform for the Java programming language. This package contains a resolver service that resolves the specified resources in the context supplied by the caller.

sbcl-one-more-re-nightmare 0.0.0-1.5b0b02e
Dependencies: sbcl-alexandria@1.4-0.009b7e5 sbcl-babel@0.5.0-3.627d6a6 sbcl-bordeaux-threads@0.9.3 sbcl-dynamic-mixins@0.0-1.7cc09be sbcl-esrap@0.18-4.d806138 sbcl-stealth-mixin@0.0.0-0.2f853fc sbcl-trivia@0.1-0.8b406c3 sbcl-trivial-indent@1.0.0-1.f252750
Channel: guix
Location: gnu/packages/lisp-xyz.scm (gnu packages lisp-xyz)
Home page: https://github.com/telekons/one-more-re-nightmare
Licenses: FreeBSD
Synopsis: Regular expression compiler in Common Lisp
Description:

one-more-re-nightmare is a regular expression engine that uses the technique presented in Regular-expression derivatives re-examined (Owens, Reppy and Turon, 2009; doi:10.1017/S0956796808007090) to interpret and compile regular expressions.

perl-test-requiresinternet 0.05
Channel: guix
Location: gnu/packages/perl-check.scm (gnu packages perl-check)
Home page: https://metacpan.org/release/Test-RequiresInternet
Licenses: GPL 1+
Synopsis: Easily test network connectivity when running tests
Description:

This Perl module is intended to easily test network connectivity to non-local Internet resources before functional tests begin. If the sockets cannot connect to the specified hosts and ports, the exception is caught and reported, and the tests skipped.

r-alphamissense-v2023-hg19 3.18.2
Propagated dependencies: r-genomicscores@2.20.0 r-annotationhub@3.16.0
Channel: guix-bioc
Location: guix-bioc/packages/a.scm (guix-bioc packages a)
Home page: https://bioconductor.org/packages/AlphaMissense.v2023.hg19
Licenses: Artistic License 2.0
Synopsis: AlphaMissense v2023 Pathogenicity Scores AnnotationHub Resource Metadata for hg19
Description:

Store Google DeepMind AlphaMissense v2023 hg19 pathogenicity scores AnnotationHub Resource Metadata. Provide provenance and citation information for Google DeepMind AlphaMissense v2023 hg19 pathogenicity score AnnotationHub resources. Illustrate in a vignette how to access those resources.

r-alphamissense-v2023-hg38 3.18.2
Propagated dependencies: r-genomicscores@2.20.0 r-annotationhub@3.16.0
Channel: guix-bioc
Location: guix-bioc/packages/a.scm (guix-bioc packages a)
Home page: https://bioconductor.org/packages/AlphaMissense.v2023.hg38
Licenses: Artistic License 2.0
Synopsis: AlphaMissense v2023 Pathogenicity Scores AnnotationHub Resource Metadata for hg38
Description:

Store Google DeepMind AlphaMissense v2023 hg38 pathogenicity scores AnnotationHub Resource Metadata. Provide provenance and citation information for Google DeepMind AlphaMissense v2023 hg38 pathogenicity score AnnotationHub resources. Illustrate in a vignette how to access those resources.

go-git-sr-ht-rjarry-go-opt 1.4.0
Channel: guix
Location: gnu/packages/golang-xyz.scm (gnu packages golang-xyz)
Home page: https://git.sr.ht/~rjarry/go-opt
Licenses: Expat
Synopsis: Argument parsing and completion based on struct tags
Description:

go-opt is a library to parse command line arguments based on tag annotations on struct fields. It came as a spin-off from aerc to deal with its internal commands.

emacs-ido-completing-read+ 4.14
Propagated dependencies: emacs-s@1.13.0
Channel: guix
Location: gnu/packages/emacs-xyz.scm (gnu packages emacs-xyz)
Home page: https://github.com/DarwinAwardWinner/ido-ubiquitous
Licenses: GPL 3+
Synopsis: Replacement for completing-read using ido
Description:

The ido-completing-read+ function is a wrapper for ido-completing-read. Importantly, it detects edge cases that ordinary ido cannot handle and either adjusts them so ido can handle them, or else simply falls back to the standard Emacs completion function instead.

r-snakesandladdersanalysis 2.1.0
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=SnakesAndLaddersAnalysis
Licenses: GPL 2
Synopsis: Play and Analyse the Game of Snakes and Ladders
Description:

Plays the game of Snakes and Ladders and has tools for analyses. The tools included allow you to find the average moves to win, frequency of each square, importance of the snakes and the ladders, the most common square and the plotting of the game played.

ecl-pythonic-string-reader 0.0.0-1.47a70ba
Dependencies: ecl-named-readtables@0.9-4.d5ff162
Channel: guix
Location: gnu/packages/lisp-xyz.scm (gnu packages lisp-xyz)
Home page: https://github.com/smithzvk/pythonic-string-reader
Licenses: Modified BSD
Synopsis: Read table modification inspired by Python's three quote strings
Description:

This piece of code sets up some reader macros that make it simpler to input string literals which contain backslashes and double quotes This is very useful for writing complicated docstrings and, as it turns out, writing code that contains string literals that contain code themselves.

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