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r-opensourceap-downloadr 0.1.0
Propagated dependencies: r-withr@3.0.2 r-stringr@1.6.0 r-rvest@1.0.5 r-rpostgres@1.4.8 r-r6@2.6.1 r-magrittr@2.0.4 r-lubridate@1.9.4 r-jsonlite@2.0.0 r-httr@1.4.7 r-getpass@0.2-4 r-dplyr@1.1.4 r-dbi@1.2.3 r-data-table@1.17.8
Channel: guix-cran
Location: guix-cran/packages/o.scm (guix-cran packages o)
Home page: https://cran.r-project.org/package=OpenSourceAP.DownloadR
Licenses: Expat
Build system: r
Synopsis: Download Open Source Asset Pricing (OpenAP) Data Directly
Description:

Convenient download functions enabling access Open Source Asset Pricing (OpenAP) data. This package enables users to download predictor portfolio returns (over 200 cross-sectional predictors with multiple portfolio construction methods) and firm characteristics (over 200 characteristics replicated from the academic asset pricing literature). Center for Research in Security Prices (CRSP)-based variables such as Price, Size, and Short-term Reversal can be downloaded with a Wharton Research Data Services (WRDS, <https://wrds-www.wharton.upenn.edu/>) subscription. For a full list of what is available, see <https://www.openassetpricing.com/>.

r-debiasedtrialemulation 0.1.2
Propagated dependencies: r-survival@3.8-3 r-purrr@1.2.0 r-parallellogger@3.5.1 r-matchit@4.7.2 r-janitor@2.2.1 r-glmnet@4.1-10 r-ggplot2@4.0.1 r-geex@1.1.1 r-empiricalcalibration@3.1.4 r-dplyr@1.1.4 r-cobalt@4.6.2
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://cran.r-project.org/package=debiasedTrialEmulation
Licenses: GPL 2+
Build system: r
Synopsis: Pipeline for Debiased Target Trial Emulation
Description:

Supports propensity score-based methodsâ including matching, stratification, and weightingâ for estimating causal treatment effects. It also implements calibration using negative control outcomes to enhance robustness. debiasedTrialEmulation facilitates effect estimation for both binary and time-to-event outcomes, supporting risk ratio (RR), odds ratio (OR), and hazard ratio (HR) as effect measures. It integrates statistical modeling and visualization tools to assess covariate balance, equipoise, and bias calibration. Additional methodsâ including approaches to address immortal time bias, information bias, selection bias, and informative censoringâ are under development. Users interested in these extended features are encouraged to contact the package authors.

r-customerscoringmetrics 1.0.0
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://cran.r-project.org/package=CustomerScoringMetrics
Licenses: GPL 2+
Build system: r
Synopsis: Evaluation Metrics for Customer Scoring Models Depending on Binary Classifiers
Description:

This package provides functions for evaluating and visualizing predictive model performance (specifically: binary classifiers) in the field of customer scoring. These metrics include lift, lift index, gain percentage, top-decile lift, F1-score, expected misclassification cost and absolute misclassification cost. See Berry & Linoff (2004, ISBN:0-471-47064-3), Witten and Frank (2005, 0-12-088407-0) and Blattberg, Kim & Neslin (2008, ISBN:978â 0â 387â 72578â 9) for details. Visualization functions are included for lift charts and gain percentage charts. All metrics that require class predictions offer the possibility to dynamically determine cutoff values for transforming real-valued probability predictions into class predictions.

r-sensitivitycalibration 0.0.1
Propagated dependencies: r-stringi@1.8.7 r-splitstackshape@1.4.8 r-relaimpo@2.2-7 r-plotly@4.11.0 r-ggrepel@0.9.6 r-ggplot2@4.0.1
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=sensitivityCalibration
Licenses: Expat
Build system: r
Synopsis: Calibrated Sensitivity Analysis for Matched Observational Studies
Description:

This package implements the calibrated sensitivity analysis approach for matched observational studies. Our sensitivity analysis framework views matched sets as drawn from a super-population. The unmeasured confounder is modeled as a random variable. We combine matching and model-based covariate-adjustment methods to estimate the treatment effect. The hypothesized unmeasured confounder enters the picture as a missing covariate. We adopt a state-of-art Expectation Maximization (EM) algorithm to handle this missing covariate problem in generalized linear models (GLMs). As our method also estimates the effect of each observed covariate on the outcome and treatment assignment, we are able to calibrate the unmeasured confounder to observed covariates. Zhang, B., Small, D. S. (2018). <arXiv:1812.00215>.

r-transformerforecasting 0.1.0
Propagated dependencies: r-tensorflow@2.20.0 r-reticulate@1.44.1 r-magrittr@2.0.4 r-keras@2.16.1 r-ggplot2@4.0.1
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=transformerForecasting
Licenses: GPL 3
Build system: r
Synopsis: Transformer Deep Learning Model for Time Series Forecasting
Description:

Time series forecasting faces challenges due to the non-stationarity, nonlinearity, and chaotic nature of the data. Traditional deep learning models like Recurrent Neural Network (RNN), Long Short-Term Memory (LSTM), and Gated Recurrent Unit (GRU) process data sequentially but are inefficient for long sequences. To overcome the limitations of these models, we proposed a transformer-based deep learning architecture utilizing an attention mechanism for parallel processing, enhancing prediction accuracy and efficiency. This paper presents user-friendly code for the implementation of the proposed transformer-based deep learning architecture utilizing an attention mechanism for parallel processing. References: Nayak et al. (2024) <doi:10.1007/s40808-023-01944-7> and Nayak et al. (2024) <doi:10.1016/j.simpa.2024.100716>.

r-differentialregulation 2.8.0
Channel: guix-bioc
Location: guix-bioc/packages/d.scm (guix-bioc packages d)
Home page: https://github.com/SimoneTiberi/DifferentialRegulation
Licenses: GPL 3
Build system: r
Synopsis: Differentially regulated genes from scRNA-seq data
Description:

DifferentialRegulation is a method for detecting differentially regulated genes between two groups of samples (e.g., healthy vs. disease, or treated vs. untreated samples), by targeting differences in the balance of spliced and unspliced mRNA abundances, obtained from single-cell RNA-sequencing (scRNA-seq) data. From a mathematical point of view, DifferentialRegulation accounts for the sample-to-sample variability, and embeds multiple samples in a Bayesian hierarchical model. Furthermore, our method also deals with two major sources of mapping uncertainty: i) ambiguous reads, compatible with both spliced and unspliced versions of a gene, and ii) reads mapping to multiple genes. In particular, ambiguous reads are treated separately from spliced and unsplced reads, while reads that are compatible with multiple genes are allocated to the gene of origin. Parameters are inferred via Markov chain Monte Carlo (MCMC) techniques (Metropolis-within-Gibbs).

r-sensitivitycasecontrol 2.2
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=SensitivityCaseControl
Licenses: GPL 2+
Build system: r
Synopsis: Sensitivity Analysis for Case-Control Studies
Description:

Sensitivity analysis for case-control studies in which some cases may meet a more narrow definition of being a case compared to other cases which only meet a broad definition. The sensitivity analyses are described in Small, Cheng, Halloran and Rosenbaum (2013, "Case Definition and Sensitivity Analysis", Journal of the American Statistical Association, 1457-1468). The functions sens.analysis.mh and sens.analysis.aberrant.rank provide sensitivity analyses based on the Mantel-Haenszel test statistic and aberrant rank test statistic as described in Rosenbaum (1991, "Sensitivity Analysis for Matched Case Control Studies", Biometrics); see also Section 1 of Small et al. The function adaptive.case.test provides adaptive inferences as described in Section 5 of Small et al. The function adaptive.noether.brown provides a sensitivity analysis for a matched cohort study based on an adaptive test. The other functions in the package are internal functions.

r-multileveloptimalbayes 0.0.4.0
Propagated dependencies: r-pracma@2.4.6
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://cran.r-project.org/package=MultiLevelOptimalBayes
Licenses: GPL 3
Build system: r
Synopsis: Regularized Bayesian Estimator for Two-Level Latent Variable Models
Description:

This package implements a regularized Bayesian estimator that optimizes the estimation of between-group coefficients for multilevel latent variable models by minimizing mean squared error (MSE) and balancing variance and bias. The package provides more reliable estimates in scenarios with limited data, offering a robust solution for accurate parameter estimation in two-level latent variable models. It is designed for researchers in psychology, education, and related fields who face challenges in estimating between-group effects under small sample sizes and low intraclass correlation coefficients. The package includes comprehensive S3 methods for result objects: print(), summary(), coef(), se(), vcov(), confint(), as.data.frame(), dim(), length(), names(), and update() for enhanced usability and integration with standard R workflows. Dashuk et al. (2025a) <doi:10.1017/psy.2025.10045> derived the optimal regularized Bayesian estimator; Dashuk et al. (2025b) <doi:10.1007/s41237-025-00264-7> extended it to the multivariate case; and Luedtke et al. (2008) <doi:10.1037/a0012869> formalized the two-level latent variable framework.

r-autocovariateselection 1.0.0
Propagated dependencies: r-purrr@1.2.0 r-dplyr@1.1.4 r-data-table@1.17.8
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://github.com/technOslerphile/autoCovariateSelection
Licenses: Expat
Build system: r
Synopsis: Automated Covariate Selection Using HDPS Algorithm
Description:

This package contains functions to implement automated covariate selection using methods described in the high-dimensional propensity score (HDPS) algorithm by Schneeweiss et.al. Covariate adjustment in real-world-observational-data (RWD) is important for for estimating adjusted outcomes and this can be done by using methods such as, but not limited to, propensity score matching, propensity score weighting and regression analysis. While these methods strive to statistically adjust for confounding, the major challenge is in selecting the potential covariates that can bias the outcomes comparison estimates in observational RWD (Real-World-Data). This is where the utility of automated covariate selection comes in. The functions in this package help to implement the three major steps of automated covariate selection as described by Schneeweiss et. al elsewhere. These three functions, in order of the steps required to execute automated covariate selection are, get_candidate_covariates(), get_recurrence_covariates() and get_prioritised_covariates(). In addition to these functions, a sample real-world-data from publicly available de-identified medical claims data is also available for running examples and also for further exploration. The original article where the algorithm is described by Schneeweiss et.al. (2009) <doi:10.1097/EDE.0b013e3181a663cc> .

r-rainfallerosivityfactor 1.0.0
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=RainfallErosivityFactor
Licenses: GPL 2+
Build system: r
Synopsis: The Rainfall-Runoff Erosivity Factor
Description:

Determination of rainfall-runoff erosivity factor.

emacs-run-command-recipes 20240708.1555
Propagated dependencies: emacs-dash@20260221.1346 emacs-f@20241003.1131 emacs-run-command@20230317.2004
Channel: emacs
Location: emacs/packages/melpa.scm (emacs packages melpa)
Home page: https://github.com/semenInRussia/emacs-run-command-recipes
Licenses:
Build system: melpa
Synopsis: Start pack of recipes to `run-command'
Description:

Documentation at https://melpa.org/#/run-command-recipes

emacs-replace-from-region 20240224.52
Channel: emacs
Location: emacs/packages/melpa.scm (emacs packages melpa)
Home page: http://www.emacswiki.org/emacs/download/replace-from-region.el
Licenses:
Build system: melpa
Synopsis: Replace commands whose query is from region
Description:

Documentation at https://melpa.org/#/replace-from-region

vendor-reset-linux-module 0.0.1-1.225a49a
Channel: wigust
Location: wigust/packages/linux.scm (wigust packages linux)
Home page: https://github.com/gnif/vendor-reset
Licenses: GPL 3+
Build system:
Synopsis: Linux kernel module to perform GPU reset method calls
Description:
emacs-eval-in-repl-racket 0.9.7
Propagated dependencies: emacs-eval-in-repl@0.9.7 emacs-racket-mode@1-8.7f2813d
Channel: guix
Location: gnu/packages/emacs-xyz.scm (gnu packages emacs-xyz)
Home page: https://github.com/kaz-yos/eval-in-repl
Licenses: Expat
Build system: emacs
Synopsis: One keybinding to communicate with REPLs
Description:

This package provides an ESS-like binding to send lines or regions to a REPL from Racket buffers.

go-github-com-akavel-rsrc 0.10.2
Channel: lauras-channel
Location: laura/packages/go-common.scm (laura packages go-common)
Home page: https://github.com/akavel/rsrc
Licenses: Expat
Build system: go
Synopsis:
#<unspecified>
node-escape-string-regexp 4.0.0
Channel: rde
Location: contrib/packages/node-xyz.scm (contrib packages node-xyz)
Home page: https://github.com/sindresorhus/escape-string-regexp#readme
Licenses: Expat
Build system: node
Synopsis: Escape RegExp special characters
Description:

Escape RegExp special characters

ruby-rails-html-sanitizer 1.6.0
Propagated dependencies: ruby-loofah@2.24.1 ruby-nokogiri@1.18.10
Channel: guix
Location: gnu/packages/rails.scm (gnu packages rails)
Home page: https://github.com/rails/rails-html-sanitizer
Licenses: Expat
Build system: ruby
Synopsis: HTML sanitization for Rails applications
Description:

This gem is used to handle HTML sanitization in Rails applications. If you need similar functionality in non Rails apps consider using Loofah directly.

node-escape-string-regexp 4.0.0
Channel: guix-science
Location: guix-science/packages/rstudio-node.scm (guix-science packages rstudio-node)
Home page: https://github.com/sindresorhus/escape-string-regexp#readme
Licenses: Expat
Build system: node
Synopsis: Escape RegExp special characters
Description:

Escape RegExp special characters

node-escape-string-regexp 1.0.5
Channel: guix-science
Location: guix-science/packages/rstudio-node.scm (guix-science packages rstudio-node)
Home page: https://github.com/sindresorhus/escape-string-regexp
Licenses: Expat
Build system: node
Synopsis: Escape RegExp special characters
Description:

Escape RegExp special characters

chicken5-r6rs-bytevectors 0.1.8
Channel: ziltis-guixchannel
Location: zilti/packages/chicken5.scm (zilti packages chicken5)
Home page: https://wiki.call-cc.org/eggref/5/r6rs-bytevectors
Licenses: Expat
Build system: chicken
Synopsis: An implementation of r6rs bytevectors
Description:

An implementation of r6rs bytevectors

chicken6-r6rs-bytevectors 0.1.8
Channel: ziltis-guixchannel
Location: zilti/packages/chicken6.scm (zilti packages chicken6)
Home page: https://wiki.call-cc.org/eggref/6/r6rs-bytevectors
Licenses: Expat
Build system: chicken
Synopsis: An implementation of r6rs bytevectors
Description:

An implementation of r6rs bytevectors

emacs-recursion-indicator 20260322.18
Propagated dependencies: emacs-compat@30.1.0.1
Channel: emacs
Location: emacs/packages/melpa.scm (emacs packages melpa)
Home page: https://github.com/minad/recursion-indicator
Licenses:
Build system: melpa
Synopsis: Recursion indicator
Description:

Documentation at https://melpa.org/#/recursion-indicator

emacs-rainbow-identifiers 20141102.1526
Channel: emacs
Location: emacs/packages/melpa.scm (emacs packages melpa)
Home page: https://github.com/Fanael/rainbow-identifiers
Licenses:
Build system: melpa
Synopsis: Highlight identifiers according to their names
Description:

Documentation at https://melpa.org/#/rainbow-identifiers

node-crypto-random-string 2.0.0
Channel: rde
Location: contrib/packages/node-xyz.scm (contrib packages node-xyz)
Home page: https://github.com/sindresorhus/crypto-random-string#readme
Licenses: Expat
Build system: node
Synopsis: Generate a cryptographically strong random string
Description:

Generate a cryptographically strong random string

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