SNP locations and alleles for Homo sapiens extracted from NCBI dbSNP Build 149. The source data files used for this package were created by NCBI between November 8-12, 2016, and contain SNPs mapped to reference genome GRCh38.p7 (a patched version of GRCh38 that doesn't alter chromosomes 1-22, X, Y, MT). Note that these SNPs can be "injected" in BSgenome.Hsapiens.NCBI.GRCh38 or in BSgenome.Hsapiens.UCSC.hg38.

SNP locations and alleles for Homo sapiens extracted from NCBI dbSNP Build 144. The source data files used for this package were created by NCBI on May 29-30, 2015, and contain SNPs mapped to reference genome GRCh37.p13. WARNING: Note that the GRCh37.p13 genome is a patched version of GRCh37. However the patch doesn't alter chromosomes 1-22, X, Y, MT. GRCh37 itself is the same as the hg19 genome from UCSC *except* for the mitochondrion chromosome. Therefore, the SNPs in this package can be "injected" in BSgenome.Hsapiens.UCSC.hg19 and they will land at the correct position but this injection will exclude chrM (i.e. nothing will be injected in that sequence).

This package provides SNP locations and alleles for Homo sapiens extracted from NCBI dbSNP Build 144. The source data files used for this package were created by NCBI on May 29-30, 2015, and contain SNPs mapped to reference genome GRCh37.p13. Note that the GRCh37.p13 genome is a patched version of GRCh37. However the patch doesn't alter chromosomes 1-22, X, Y, MT. GRCh37 itself is the same as the hg19 genome from UCSC *except* for the mitochondrion chromosome. Therefore, the SNPs in this package can be injected in BSgenome.Hsapiens.UCSC.hg19 and they will land at the correct position but this injection will exclude chrM (i.e. nothing will be injected in that sequence).

This package provides factors out an opinionated selection of internal packages and functionality from the Go standard library. Currently this consists mostly of packages and testing code from within the Go tool implementation.

Included are the following:

• dirhash: calculate hashes over directory trees the same way that the Go tool does.

• goproxytest: a GOPROXY implementation designed for test use.

• gotooltest: Use the Go tool inside test scripts (see testscript below)

• imports: list of known architectures and OSs, and support for reading import import statements.

• modfile: read and write go.mod files while preserving formatting and comments.

• module: module paths and versions.

• par: do work in parallel.

• semver: semantic version parsing.

• testenv: information on the current testing environment.

• testscript: script-based testing based on txtar files

• txtar: simple text-based file archives for testing.

This package provides factors out an opinionated selection of internal packages and functionality from the Go standard library. Currently this consists mostly of packages and testing code from within the Go tool implementation.

Included are the following:

• dirhash: calculate hashes over directory trees the same way that the Go tool does.

• goproxytest: a GOPROXY implementation designed for test use.

• gotooltest: Use the Go tool inside test scripts (see testscript below)

• imports: list of known architectures and OSs, and support for reading import import statements.

• modfile: read and write go.mod files while preserving formatting and comments.

• module: module paths and versions.

• par: do work in parallel.

• semver: semantic version parsing.

• testenv: information on the current testing environment.

• testscript: script-based testing based on txtar files

• txtar: simple text-based file archives for testing.

Exposes an annotation databases generated from UCSC by exposing these as TxDb objects.

Exposes an annotation databases generated from UCSC by exposing these as TxDb objects.

Exposes an annotation databases generated from UCSC by exposing these as TxDb objects.

Exposes an annotation databases generated from UCSC by exposing these as TxDb objects.

Platform Design Info for NimbleGen 2006-07-18_mm8_refseq_promoter.

Exposes an annotation databases generated from UCSC by exposing these as TxDb objects.

Exposes an annotation databases generated from UCSC by exposing these as TxDb objects.

Exposes an annotation databases generated from UCSC by exposing these as TxDb objects.

Exposes an annotation databases generated from UCSC by exposing these as TxDb objects.

Exposes an annotation databases generated from UCSC by exposing these as TxDb objects.

Exposes an annotation databases generated from UCSC by exposing these as TxDb objects.

Exposes an annotation databases generated from UCSC by exposing these as TxDb objects.

Exposes an annotation databases generated from UCSC by exposing these as TxDb objects.

This package provides a hashing function.

Probe sequences from Illumina (ftp.illumina.com) for hm450 probes.

Common protocol buffer types used by Google APIs

This package provides Java classes for well known RDF vocabularies.

Affymetrix clariomdhuman annotation data (chip clariomdhumantranscriptcluster) assembled using data from public repositories.

Affymetrix clariomsmouse annotation data (chip clariomsmousetranscriptcluster) assembled using data from public repositories.