_            _    _        _         _
      /\ \         /\ \ /\ \     /\_\      / /\
      \_\ \       /  \ \\ \ \   / / /     / /  \
      /\__ \     / /\ \ \\ \ \_/ / /     / / /\ \__
     / /_ \ \   / / /\ \ \\ \___/ /     / / /\ \___\
    / / /\ \ \ / / /  \ \_\\ \ \_/      \ \ \ \/___/
   / / /  \/_// / /   / / / \ \ \        \ \ \
  / / /      / / /   / / /   \ \ \   _    \ \ \
 / / /      / / /___/ / /     \ \ \ /_/\__/ / /
/_/ /      / / /____\/ /       \ \_\\ \/___/ /
\_\/       \/_________/         \/_/ \_____\/
r-tsdisaggregation 2.0.0
Propagated dependencies: r-zoo@1.8-14 r-withr@3.0.2 r-rdpack@2.6.4 r-matrix@1.7-3 r-lars@1.3
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=TSdisaggregation
Licenses: GPL 3+
Synopsis: High-Dimensional Temporal Disaggregation
Description:

First - Generates (potentially high-dimensional) high-frequency and low-frequency series for simulation studies in temporal disaggregation; Second - a toolkit utilizing temporal disaggregation and benchmarking techniques with a low-dimensional matrix of indicator series previously proposed in Dagum and Cholette (2006, ISBN:978-0-387-35439-2) ; and Third - novel techniques proposed by Mosley, Gibberd and Eckley (2021) <arXiv:2108.05783> for disaggregating low-frequency series in the presence of high-dimensional indicator matrices.

r-tm-plugin-korpus 0.4-2
Propagated dependencies: r-tm@0.7-16 r-sylly@0.1-6 r-nlp@0.3-2 r-korpus@0.13-8
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://reaktanz.de/?c=hacking&s=koRpus
Licenses: GPL 3+
Synopsis: Full Corpus Support for the 'koRpus' Package
Description:

Enhances koRpus text object classes and methods to also support large corpora. Hierarchical ordering of corpus texts into arbitrary categories will be preserved. Provided classes and methods also improve the ability of using the koRpus package together with the tm package. To ask for help, report bugs, suggest feature improvements, or discuss the global development of the package, please subscribe to the koRpus-dev mailing list (<https://korpusml.reaktanz.de>).

r-uniisoregression 0.0-0
Propagated dependencies: r-rcpp@1.0.14
Channel: guix-cran
Location: guix-cran/packages/u.scm (guix-cran packages u)
Home page: https://github.com/xzp1995/UniIsoRegression
Licenses: GPL 2+
Synopsis: Unimodal and Isotonic L1, L2 and Linf Regression
Description:

Perform L1 or L2 isotonic and unimodal regression on 1D weighted or unweighted input vector and isotonic regression on 2D weighted or unweighted input vector. It also performs L infinity isotonic and unimodal regression on 1D unweighted input vector. Reference: Quentin F. Stout (2008) <doi:10.1016/j.csda.2008.08.005>. Spouge, J., Wan, H. & Wilbur, W.(2003) <doi:10.1023/A:1023901806339>. Q.F. Stout (2013) <doi:10.1007/s00453-012-9628-4>.

texlive-tikz-relay 2025.2
Channel: guix
Location: gnu/packages/tex.scm (gnu packages tex)
Home page: https://ctan.org/pkg/tikz-relay
Licenses: LPPL 1.0+
Synopsis: TikZ library for typesetting electrical diagrams
Description:

This package contains a collection of symbols for typesetting electrical wiring diagrams for relay control systems. The symbols are meant to be in agreement with the international standard IEC-60617 which has been adopted worldwide, with perhaps the exception of the USA. It extends and modifies, when needed, the TikZ-library circuits.ee.IEC. A few non-standard symbols are also included mainly to be used in presentations, particularly with the beamer package.

r-covidprobability 0.1.0
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://github.com/eebrown/covidprobability
Licenses: GPL 3
Synopsis: Estimate the Unit-Wide Probability of COVID-19
Description:

We propose a method to estimate the probability of an undetected case of COVID-19 in a defined setting, when a given number of people have been exposed, with a given pretest probability of having COVID-19 as a result of that exposure. Since we are interested in undetected COVID-19, we assume no person has developed symptoms (which would warrant further investigation) and that everyone was tested on a given day, and all tested negative.

r-extraterrestrial 0.1.0
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://cran.r-project.org/package=extraterrestrial
Licenses: GPL 3
Synopsis: Astrobiology Equations Estimating Extraterrestrial Life
Description:

Finding life outside the planet Earth several is the ultimate goal of an astrobiologist. Using known astronomical measurements and assumptions the probability of extraterrestrial life existence could be estimated. Equations such as the Drake equation (1961) as stated in the paper of Molina (2019) <arXiv:1912.01783>, Seager (2013) <https://www.space.com/22648-drake-equation-alien-life-seager.html> and Foucher et al, (2017) <doi:10.3390/life7040040> are included in the extraterrestrial package.

r-implicitmeasures 0.3.0
Propagated dependencies: r-xtable@1.8-4 r-tidyr@1.3.1 r-stringr@1.5.1 r-ggplot2@3.5.2
Channel: guix-cran
Location: guix-cran/packages/i.scm (guix-cran packages i)
Home page: https://cran.r-project.org/package=implicitMeasures
Licenses: Expat
Synopsis: Compute Scores for Different Implicit Measures
Description:

This package provides a tool for computing the scores for the Implicit Association Test (IAT; Greenwald, McGhee & Schwartz (1998) <doi:10.1037/0022-3514.74.6.1464>) and the Single Category-IAT (SC-IAT: Karpinski & Steinman (2006) <doi:10.1037/0022-3514.91.1.16>). Functions for preparing the data (both for the IAT and the SC-IAT), plotting the results, and obtaining a table with the scores of implicit measures descriptive statistics are provided.

r-postlightmercury 1.2
Propagated dependencies: r-xml2@1.3.8 r-tibble@3.2.1 r-rvest@1.0.4 r-purrr@1.0.4 r-jsonlite@2.0.0 r-crul@1.5.0
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=postlightmercury
Licenses: Expat
Synopsis: Parses Web Pages using Postlight Mercury
Description:

This is a wrapper for the Mercury Parser API. The Mercury Parser is a single API endpoint that takes a URL and gives you back the content reliably and easily. With just one API request, Mercury takes any web article and returns only the relevant content â headline, author, body text, relevant images and more â free from any clutter. Itâ s reliable, easy-to-use and free. See the webpage here: <https://mercury.postlight.com/>.

r-survbootoutliers 1.0
Propagated dependencies: r-survival@3.8-3
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/jonydog/survBootOutliers
Licenses: GPL 2
Synopsis: Concordance Based Bootstrap Methods for Outlier Detection in Survival Analysis
Description:

Three new methods to perform outlier detection in a survival context. In total there are six methods provided, the first three methods are traditional residual-based outlier detection methods, the second three are the concordance-based. Package developed during the work on the two following publications: Pinto J., Carvalho A. and Vinga S. (2015) <doi:10.5220/0005225300750082>; Pinto J.D., Carvalho A.M., Vinga S. (2015) <doi:10.1007/978-3-319-27926-8_22>.

r-timelinegraphics 1.0
Propagated dependencies: r-r2html@2.3.4 r-pdftools@3.5.0 r-magick@2.8.6 r-berryfunctions@1.22.13
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=timeLineGraphics
Licenses: GPL 2+
Synopsis: HTML with Horizontal Strips Symbolizing Events in a Person's Life
Description:

Produce an HTML page containing horizontal strips that symbolize events in a person's lsife. Since this is entirely a visualization, the image <https://barryzee.github.io/henry-timeline/henry.html> will show the basic use to show a timeline of events. The image <https://barryzee.github.io/vermeer/cssOverlay.html> shows how to correlate two timelines of events. A brief description is available at <https://barryzee.github.io/timeLineGraphics_manuscript/golden_age.html>.

r-cropwaterbalance 0.2.0
Propagated dependencies: r-powersdi@1.0.0 r-lubridate@1.9.4
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://github.com/gabrielblain/CropWaterBalance
Licenses: Expat
Synopsis: Climate Water Balance for Irrigation Purposes
Description:

Calculates daily climate water balance for irrigation purposes and also calculates the reference evapotranspiration (ET) using three methods, Penman and Monteith (Allen et al. 1998, ISBN:92-5-104219-5); Priestley and Taylor (1972) <doi:10/cr3qwn>; or Hargreaves and Samani (1985) <doi:10.13031/2013.26773>. Users may specify a management allowed depletion (MAD), which is used to suggest when to irrigate. The functionality allows for the use of crop and water stress coefficients as well.

r-hotellingellipse 1.2.0
Propagated dependencies: r-tibble@3.2.1 r-rgl@1.3.18 r-purrr@1.0.4 r-magrittr@2.0.3 r-lifecycle@1.0.4 r-ggplot2@3.5.2 r-ggforce@0.4.2 r-factominer@2.11 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/h.scm (guix-cran packages h)
Home page: https://github.com/ChristianGoueguel/HotellingEllipse
Licenses: Expat
Synopsis: Hotelling’s T-Squared Statistic and Ellipse
Description:

This package provides functions to calculate the Hotellingâ s T-squared statistic and corresponding confidence ellipses. Provides the semi-axes of the Hotellingâ s T-squared ellipses at 95% and 99% confidence levels. Enables users to obtain the coordinates in two or three dimensions at user-defined confidence levels, allowing for the construction of 2D or 3D ellipses with customized confidence levels. Bro and Smilde (2014) <DOI:10.1039/c3ay41907j>. Brereton (2016) <DOI:10.1002/cem.2763>.

r-mlmodelselection 1.0
Propagated dependencies: r-rcppdist@0.1.1 r-rcpparmadillo@14.4.3-1 r-rcpp@1.0.14 r-mass@7.3-65
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://github.com/kuojunglee/
Licenses: GPL 2
Synopsis: Model Selection in Multivariate Longitudinal Data Analysis
Description:

An efficient Gibbs sampling algorithm is developed for Bayesian multivariate longitudinal data analysis with the focus on selection of important elements in the generalized autoregressive matrix. It provides posterior samples and estimates of parameters. In addition, estimates of several information criteria such as Akaike information criterion (AIC), Bayesian information criterion (BIC), deviance information criterion (DIC) and prediction accuracy such as the marginal predictive likelihood (MPL) and the mean squared prediction error (MSPE) are provided for model selection.

racket-with-ffmpeg 8.17
Dependencies: ffmpeg@6.1.1 cairo@1.18.2 fontconfig-minimal@2.14.0 glib@2.82.1 glu@9.0.2 gmp@6.3.0 gtk+@3.24.43 libjpeg-turbo@2.1.4 libpng@1.6.39 libx11@1.8.10 mesa@25.1.3 mpfr@4.2.1 pango@1.54.0 unixodbc@2.3.9 libedit@20191231-3.1 racket-minimal@8.17 racket-vm-cs@8.17
Channel: tassos-guix
Location: tassos-guix/packages/racket-with-ffmpeg.scm (tassos-guix packages racket-with-ffmpeg)
Home page: https://racket-lang.org
Licenses: ASL 2.0 Expat
Synopsis: Programmable programming language in the Scheme family
Description:

Racket is a general-purpose programming language in the Scheme family, with a large set of libraries and a compiler based on Chez Scheme. Racket is also a platform for language-oriented programming, from small domain-specific languages to complete language implementations.

The main Racket distribution comes with many bundled packages, including the DrRacket IDE, libraries for GUI and web programming, and implementations of languages such as Typed Racket, R5RS and R6RS Scheme, Algol 60, and Datalog.

r-ic10trainingdata 2.0.1
Channel: guix-cran
Location: guix-cran/packages/i.scm (guix-cran packages i)
Home page: https://cran.r-project.org/package=iC10TrainingData
Licenses: GPL 3
Synopsis: Training Datasets for iC10 Package
Description:

Training datasets for iC10; which implements the classifier described in the paper Genome-driven integrated classification of breast cancer validated in over 7,500 samples (Ali HR et al., Genome Biology 2014). It uses copy number and/or expression form breast cancer data, trains a pamr classifier (Tibshirani et al.) with the features available and predicts the iC10 group. Genomic annotation for the training dataset has been obtained from Mark Dunning's lluminaHumanv3.db package.

metis4parmetis-r64 4.0.3
Dependencies: openblas@0.3.29
Channel: guix-hpc-non-free
Location: non-free/parmetis.scm (non-free parmetis)
Home page: http://glaros.dtc.umn.edu/gkhome/metis/parmetis/overview
Licenses: ASL 2.0
Synopsis: Graph partitioning and fill-reducing matrix ordering library (built out of Parmetis with 64-bit real)
Description:

ParMETIS is an MPI-based parallel library that implements a variety of algorithms for partitioning unstructured graphs, meshes, and for computing fill-reducing orderings of sparse matrices. ParMETIS extends the functionality provided by METIS and includes routines that are especially suited for parallel AMR computations and large scale numerical simulations. The algorithms implemented in ParMETIS are based on the parallel multilevel k-way graph-partitioning, adaptive repartitioning, and parallel multi-constrained partitioning schemes developed in our lab.

r-saehb-panel-beta 0.1.5
Dependencies: jags@4.3.1
Propagated dependencies: r-stringr@1.5.1 r-rjags@4-17 r-dplyr@1.1.4 r-coda@0.19-4.1
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/DianRahmawatiSalis/saeHB.panel.beta
Licenses: GPL 3
Synopsis: Small Area Estimation using HB for Rao Yu Model under Beta Distribution
Description:

Several functions are provided for small area estimation at the area level using the hierarchical bayesian (HB) method with panel data under beta distribution for variable interest. This package also provides a dataset produced by data generation. The rjags package is employed to obtain parameter estimates. Model-based estimators involve the HB estimators, which include the mean and the variation of the mean. For the reference, see Rao and Molina (2015, ISBN: 978-1-118-73578-7).

r-exhaustivesearch 1.0.1
Propagated dependencies: r-rcpparmadillo@14.4.3-1 r-rcpp@1.0.14
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://github.com/RudolfJagdhuber/ExhaustiveSearch
Licenses: GPL 3+
Synopsis: Fast and Scalable Exhaustive Feature Selection Framework
Description:

The goal of this package is to provide an easy to use, fast and scalable exhaustive search framework. Exhaustive feature selections typically require a very large number of models to be fitted and evaluated. Execution speed and memory management are crucial factors here. This package provides solutions for both. Execution speed is optimized by using a multi-threaded C++ backend, and memory issues are solved by by only storing the best results during execution and thus keeping memory usage constant.

android-udev-rules 20210501
Channel: guix
Location: gnu/packages/android.scm (gnu packages android)
Home page: https://github.com/M0Rf30/android-udev-rules
Licenses: GPL 3+
Synopsis: udev rules for Android devices
Description:

Provides a set of udev rules to allow using Android devices with tools such as adb and fastboot without root privileges. This package is intended to be added as a rule to the udev-service-type in your operating-system configuration. Additionally, an adbusers group must be defined and your user added to it.

Simply installing this package will not have any effect. It is meant to be passed to the udev service.

r-decomplexdisease 1.18.0
Propagated dependencies: r-biocparallel@1.42.0 r-complexheatmap@2.24.0 r-deseq2@1.48.1 r-edger@4.6.2 r-rcpp@1.0.14 r-summarizedexperiment@1.38.1
Channel: guix
Location: gnu/packages/bioconductor.scm (gnu packages bioconductor)
Home page: https://bioconductor.org/packages/DEComplexDisease
Licenses: GPL 3
Synopsis: Investigations of complex diseases by bi-clustering analysis
Description:

DEComplexDisease is designed to find the DEGs for complex disease, which is characterized by the heterogeneous genomic expression profiles. Different from the established DEG analysis tools, it does not assume the patients of complex diseases to share the common DEGs. By applying a bi-clustering algorithm, DEComplexDisease finds the DEGs shared by as many patients. Applying the DEComplexDisease analysis results, users are possible to find the patients affected by the same mechanism based on the shared signatures.

r-rpowersamplesize 1.0.2
Propagated dependencies: r-ssanv@1.1 r-mvtnorm@1.3-3
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=rPowerSampleSize
Licenses: GPL 3+
Synopsis: Sample Size Computations Controlling the Type-II Generalized Family-Wise Error Rate
Description:

The significance of mean difference tests in clinical trials is established if at least r null hypotheses are rejected among m that are simultaneously tested. This package enables one to compute necessary sample sizes for single-step (Bonferroni) and step-wise procedures (Holm and Hochberg). These three procedures control the q-generalized family-wise error rate (probability of making at least q false rejections). Sample size is computed (for these single-step and step-wise procedures) in a such a way that the r-power (probability of rejecting at least r false null hypotheses, i.e. at least r significant endpoints among m) is above some given threshold, in the context of tests of difference of means for two groups of continuous endpoints (variables). Various types of structure of correlation are considered. It is also possible to analyse data (i.e., actually test difference in means) when these are available. The case r equals 1 is treated in separate functions that were used in Lafaye de Micheaux et al. (2014) <doi:10.1080/10543406.2013.860156>.

r-hierarchicalsets 1.0.4
Propagated dependencies: r-viridis@0.6.5 r-scales@1.4.0 r-rcpp@1.0.14 r-rcolorbrewer@1.1-3 r-patchwork@1.3.0 r-matrix@1.7-3 r-mass@7.3-65 r-gtable@0.3.6 r-ggplot2@3.5.2 r-ggdendro@0.2.0
Channel: guix-cran
Location: guix-cran/packages/h.scm (guix-cran packages h)
Home page: https://cran.r-project.org/package=hierarchicalSets
Licenses: Expat
Synopsis: Set Data Visualization Using Hierarchies
Description:

Pure set data visualization approaches are often limited in scalability due to the combinatorial explosion of distinct set families as the number of sets under investigation increases. hierarchicalSets applies a set centric hierarchical clustering of the sets under investigation and uses this hierarchy as a basis for a range of scalable visual representations. hierarchicalSets is especially well suited for collections of sets that describe comparable comparable entities as it relies on the sets to have a meaningful relational structure.

r-ipedsuploadables 2.10.0
Propagated dependencies: r-tidyr@1.3.1 r-svdialogs@1.1.0 r-stringr@1.5.1 r-rlang@1.1.6 r-purrr@1.0.4 r-magrittr@2.0.3 r-lubridate@1.9.4 r-lifecycle@1.0.4 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/i.scm (guix-cran packages i)
Home page: https://github.com/AlisonLanski/IPEDSuploadables
Licenses: Expat
Synopsis: Transforms Institutional Data into Text Files for IPEDS Automated Import/Upload
Description:

Starting from user-supplied institutional data, these scripts transform, aggregate, and reshape the information to produce key-value pair data files that are able to be uploaded to IPEDS (Integrated Postsecondary Education Data System) through their submission portal <https://surveys.nces.ed.gov/ipeds/>. Starting data specifications can be found in the vignettes. Final files are saved locally to a location of the user's choice. User-friendly readable files can also be produced for purposes of data review and validation.

r-fasterelasticnet 1.1.2
Propagated dependencies: r-rcpparmadillo@14.4.3-1 r-rcpp@1.0.14
Channel: guix-cran
Location: guix-cran/packages/f.scm (guix-cran packages f)
Home page: https://github.com/CUFESAM/Elastic-Net
Licenses: GPL 2+
Synopsis: An Amazing Fast Way to Fit Elastic Net
Description:

Fit Elastic Net, Lasso, and Ridge regression and do cross-validation in a fast way. We build the algorithm based on Least Angle Regression by Bradley Efron, Trevor Hastie, Iain Johnstone, etc. (2004)(<doi:10.1214/009053604000000067 >) and some algorithms like Givens rotation and Forward/Back Substitution. In this way, many matrices to be computed are retained as triangular matrices which can eventually speed up the computation. The fitting algorithm for Elastic Net is written in C++ using Armadillo linear algebra library.

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