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r-hem 1.82.0
Propagated dependencies: r-biobase@2.70.0
Channel: guix-bioc
Location: guix-bioc/packages/h.scm (guix-bioc packages h)
Home page: http://www.healthsystem.virginia.edu/internet/hes/biostat/bioinformatics/
Licenses: GPL 2+
Build system: r
Synopsis: Heterogeneous error model for identification of differentially expressed genes under multiple conditions
Description:

This package fits heterogeneous error models for analysis of microarray data.

r-xde 2.56.0
Propagated dependencies: r-siggenes@1.84.0 r-rcolorbrewer@1.1-3 r-mvtnorm@1.3-3 r-gtools@3.9.5 r-genemeta@1.82.0 r-genefilter@1.92.0 r-biocgenerics@0.56.0 r-biobase@2.70.0
Channel: guix-bioc
Location: guix-bioc/packages/x.scm (guix-bioc packages x)
Home page: https://bioconductor.org/packages/XDE
Licenses: LGPL 2.0
Build system: r
Synopsis: XDE: a Bayesian hierarchical model for cross-study analysis of differential gene expression
Description:

Multi-level model for cross-study detection of differential gene expression.

r-ern 2.1.2
Propagated dependencies: r-zoo@1.8-14 r-tidyr@1.3.1 r-tibble@3.3.0 r-stringr@1.6.0 r-runjags@2.2.2-5 r-rjags@4-17 r-patchwork@1.3.2 r-lubridate@1.9.4 r-ggplot2@4.0.1 r-epiestim@2.2-5 r-dplyr@1.1.4 r-coda@0.19-4.1 r-assertthat@0.2.1
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://cran.r-project.org/package=ern
Licenses: Expat
Build system: r
Synopsis: Effective Reproduction Number Estimation
Description:

Estimate the effective reproduction number from wastewater and clinical data sources.

r-hdi 0.1-10
Propagated dependencies: r-scalreg@1.0.1 r-mass@7.3-65 r-linprog@0.9-4 r-glmnet@4.1-10
Channel: guix-cran
Location: guix-cran/packages/h.scm (guix-cran packages h)
Home page: https://cran.r-project.org/package=hdi
Licenses: GPL 2+ GPL 3+
Build system: r
Synopsis: High-Dimensional Inference
Description:

Implementation of multiple approaches to perform inference in high-dimensional models.

r-kza 4.1.0.1
Dependencies: fftw@3.3.10
Channel: guix-cran
Location: guix-cran/packages/k.scm (guix-cran packages k)
Home page: https://cran.r-project.org/package=kza
Licenses: GPL 3
Build system: r
Synopsis: Kolmogorov-Zurbenko Adaptive Filters
Description:

Time Series Analysis including break detection, spectral analysis, KZ Fourier Transforms.

r-set 1.2
Propagated dependencies: r-do@2.0.0.1
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/yikeshu0611/set
Licenses: GPL 3
Build system: r
Synopsis: Set Operation
Description:

More easy to get intersection, union or complementary set and combinations.

r-tvm 0.5.2
Propagated dependencies: r-scales@1.4.0 r-reshape2@1.4.5 r-ggplot2@4.0.1
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://bitbucket.org/juancentro/tvm
Licenses: Expat
Build system: r
Synopsis: Time Value of Money Functions
Description:

This package provides functions for managing cashflows and interest rate curves.

r-rex 1.2.1
Propagated dependencies: r-lazyeval@0.2.2
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/kevinushey/rex
Licenses: Expat
Build system: r
Synopsis: Friendly regular expressions
Description:

This package provides a friendly interface for the construction of regular expressions. Regular expressions are a very powerful feature, however they are often difficult to interpret. Rex allows you to build complex regular expressions from human readable expressions

r-rid 0.0.1
Propagated dependencies: r-rcppeigen@0.3.4.0.2 r-rcpp@1.1.0 r-purrr@1.2.0 r-pracma@2.4.6 r-circularsilhouette@0.0.1
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=rid
Licenses: GPL 3
Build system: r
Synopsis: Multiple Change-Point Detection in Multivariate Time Series
Description:

This package provides efficient functions for detecting multiple change points in multidimensional time series. The models can be piecewise constant or polynomial. Adaptive threshold selection methods are available, see Fan and Wu (2024) <arXiv:2403.00600>.

r-rje 1.12.1
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=rje
Licenses: GPL 2+
Build system: r
Synopsis: Miscellaneous Useful Functions for Statistics
Description:

This package provides a series of functions in some way considered useful to the author. These include methods for subsetting tables and generating indices for arrays, conditioning and intervening in probability distributions, generating combinations, fast transformations, and more...

r-acd 1.5.3
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/ACD/
Licenses: GPL 2+
Build system: r
Synopsis: Categorical data analysis with complete or missing responses
Description:

This package provides tools for categorical data analysis with complete or missing responses.

r-aca 1.1
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/ACA/
Licenses: GPL 2+ GPL 3+
Build system: r
Synopsis: Abrupt change-point or aberration detection in point series
Description:

This package offers an interactive function for the detection of breakpoints in series.

r-ttr 0.24.4
Propagated dependencies: r-curl@7.0.0 r-xts@0.14.1 r-zoo@1.8-14
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/joshuaulrich/TTR
Licenses: GPL 2
Build system: r
Synopsis: Technical trading rules
Description:

This package provides functions and data to construct technical trading rules with R.

r-hmr 1.0.5
Channel: guix-cran
Location: guix-cran/packages/h.scm (guix-cran packages h)
Home page: https://cran.r-project.org/package=HMR
Licenses: GPL 2+
Build system: r
Synopsis: Flux Estimation with Static Chamber Data
Description:

Statistical analysis of static chamber concentration data for trace gas flux estimation.

r-log 1.1.1
Propagated dependencies: r-r6@2.6.1 r-crayon@1.5.3 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/l.scm (guix-cran packages l)
Home page: https://cran.r-project.org/package=log
Licenses: AGPL 3
Build system: r
Synopsis: Record Events and Issues
Description:

Logger to keep track of informational events and errors useful for debugging.

r-mar 1.2-0
Propagated dependencies: r-mass@7.3-65
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://cran.r-project.org/package=mAr
Licenses: GPL 2+
Build system: r
Synopsis: Multivariate AutoRegressive Analysis
Description:

R functions for the estimation and eigen-decomposition of multivariate autoregressive models.

r-msg 0.8
Propagated dependencies: r-rcolorbrewer@1.1-3
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://github.com/yihui/MSG
Licenses: GPL 2+ GPL 3+
Build system: r
Synopsis: Data and Functions for the Book Modern Statistical Graphics
Description:

This package provides a companion to the Chinese book ``Modern Statistical Graphics''.

r-prf 1.2
Propagated dependencies: r-reshape2@1.4.5 r-randomforest@4.7-1.2 r-permute@0.9-8 r-multtest@2.66.0 r-ggplot2@4.0.1 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=pRF
Licenses: GPL 3
Build system: r
Synopsis: Permutation Significance for Random Forests
Description:

Estimate False Discovery Rates (FDRs) for importance metrics from random forest runs.

r-sms 2.3.1
Propagated dependencies: r-iterators@1.0.14 r-foreach@1.5.2 r-doparallel@1.0.17
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=sms
Licenses: GPL 3
Build system: r
Synopsis: Spatial Microsimulation
Description:

Produce small area population estimates by fitting census data to survey data.

r-ttt 1.0
Propagated dependencies: r-knitr@1.50 r-htmltools@0.5.8.1 r-formula@1.2-5
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/benjaminrich/ttt
Licenses: GPL 3
Build system: r
Synopsis: The Table Tool
Description:

Create structured, formatted HTML tables of in a flexible and convenient way.

r-rgf 1.1.1
Dependencies: python-scipy@1.12.0 python-scikit-learn@1.7.0 python@3.11.14
Propagated dependencies: r-reticulate@1.44.1 r-r6@2.6.1 r-matrix@1.7-4
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/RGF-team/rgf/tree/master/R-package
Licenses: Expat
Build system: r
Synopsis: Regularized Greedy Forest
Description:

Regularized Greedy Forest wrapper of the Regularized Greedy Forest <https://github.com/RGF-team/rgf/tree/master/python-package> python package, which also includes a Multi-core implementation (FastRGF) <https://github.com/RGF-team/rgf/tree/master/FastRGF>.

r-spp 1.16.0
Dependencies: zlib@1.3.1
Propagated dependencies: r-bh@1.87.0-1 r-catools@1.18.3 r-rcpp@1.1.0 r-rsamtools@2.26.0
Channel: guix
Location: gnu/packages/bioconductor.scm (gnu packages bioconductor)
Home page: https://cran.r-project.org/web/packages/spp/
Licenses: GPL 2
Build system: r
Synopsis: ChIP-Seq processing pipeline
Description:

This package provides tools for analysis of ChIP-seq and other functional sequencing data.

r-drr 0.0.4
Propagated dependencies: r-cvst@0.2-3 r-kernlab@0.9-33 r-matrix@1.7-4
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/DRR
Licenses: GPL 3
Build system: r
Synopsis: Dimensionality reduction via regression
Description:

This package provides an implementation of dimensionality reduction via regression using Kernel Ridge Regression.

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