Gradient-Enhanced Kriging as an emulator for computer experiments based on Maximum-Likelihood estimation.

Computes multiple correlation coefficient when the data matrix is given and tests its significance.

Efficient procedures for fitting and cross-validating the structurally-regularized time-dependent Cox models.

Includes algorithms to assess research productivity and patterns, such as the h-index and i-index. Cardoso et al. (2022) Cardoso, P., Fukushima, C.S. & Mammola, S. (2022) Quantifying the internationalization and representativeness in research. Trends in Ecology and Evolution, 37: 725-728.

Allows interaction with Interactive Brokers Trader Workstation <https://interactivebrokers.github.io/tws-api/>. Handles the connection over the network and the exchange of messages. Data is encoded and decoded between user and wire formats. Data structures and functionality closely mirror the official implementations.

Combine ideas of log-linear analysis of contingency table, flexible response function estimation and empirical Bayes dispersion estimation for explorative visualization of microbiome datasets. The package includes unconstrained as well as constrained analysis. In addition, diagnostic plot to detect lack of fit are available.

This package provides functions and datasets from book Companion to Applied regression, Second Edition, Sage, 2011.

This package provides ``Rogue: Exploring the Dungeons of Doom'', the original rogue game found on 4.2BSD.

This package provides an interface to Bank of Japan <https://www.boj.or.jp> statistics.

Generate cost effective minimally changed run sequences for symmetrical as well as asymmetrical factorial designs.

Check a data frame for personal information, including names, location, disability status, and geo-coordinates.

This package implements sparse Bayesian learning method for QTL mapping and genome-wide association studies.

Code to facilitate simulation and inference when connectivity is defined by underlying random walks. Methods for spatially-correlated pairwise distance data are especially considered. This provides core code to conduct analyses similar to that in Hanks and Hooten (2013) <doi:10.1080/01621459.2012.724647>.

Randomization inference procedures for simple and complex randomized designs, including multi-armed trials, as described in Gerber and Green (2012, ISBN: 978-0393979954). Users formally describe their randomization procedure and test statistic. The randomization distribution of the test statistic under some null hypothesis is efficiently simulated.

This package provides functions and datasets for maximum likelihood fitting of some classes of graphical Markov models.

Ripes is a visual computer architecture simulator and assembly code editor built for the RISCV instruction set architecture.

This package provides functions that read and solve linear inverse problems (food web problems, linear programming problems).

Rhino implements ECMAScript, also known as JavaScript, in Java as specified in the fifth edition of ECMA-262.

This package provides a normalization tool for RNA-Seq data, implementing the conditional quantile normalization method.

This package provides a tool for unsupervised clustering and analysis of single cell RNA-Seq data.

Estimation of average proportional distance for repeatability of responses in scales items, more other supplemental information.

Bayesian adaptive randomization is also called outcome adaptive randomization, which is increasingly used in clinical trials.

Significance tests are provided for canonical correlation analysis, including asymptotic tests and a Monte Carlo method.

Calculate and analyze ecological connectivity across the watercourse of river networks using the Dendritic Connectivity Index.