_            _    _        _         _
      /\ \         /\ \ /\ \     /\_\      / /\
      \_\ \       /  \ \\ \ \   / / /     / /  \
      /\__ \     / /\ \ \\ \ \_/ / /     / / /\ \__
     / /_ \ \   / / /\ \ \\ \___/ /     / / /\ \___\
    / / /\ \ \ / / /  \ \_\\ \ \_/      \ \ \ \/___/
   / / /  \/_// / /   / / / \ \ \        \ \ \
  / / /      / / /   / / /   \ \ \   _    \ \ \
 / / /      / / /___/ / /     \ \ \ /_/\__/ / /
/_/ /      / / /____\/ /       \ \_\\ \/___/ /
\_\/       \/_________/         \/_/ \_____\/

Enter the query into the form above. You can look for specific version of a package by using @ symbol like this: gcc@10.

API method:

GET /api/packages?search=hello&page=1&limit=20

where search is your query, page is a page number and limit is a number of items on a single page. Pagination information (such as a number of pages and etc) is returned in response headers.

If you'd like to join our channel webring send a patch to ~whereiseveryone/toys@lists.sr.ht adding your channel as an entry in channels.scm.


r-structree 1.1.7
Propagated dependencies: r-penalized@0.9-53 r-mgcv@1.9-4 r-lme4@1.1-37
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=structree
Licenses: GPL 3
Build system: r
Synopsis: Tree-Structured Clustering
Description:

Tree-structured modelling of categorical predictors (Tutz and Berger (2018), <doi:10.1007/s11634-017-0298-6>) or measurement units (Berger and Tutz (2018), <doi:10.1080/10618600.2017.1371030>).

r-string2path 0.2.2
Propagated dependencies: r-tibble@3.3.0 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://yutannihilation.github.io/string2path/
Licenses: Expat
Build system: r
Synopsis: Rendering Font into 'data.frame'
Description:

Extract glyph information from font data, and translate the outline curves to flattened paths or tessellated polygons. The converted data is returned as a data.frame in easy-to-plot format.

r-sqlcaser 0.2.1
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=sqlcaser
Licenses: Expat
Build system: r
Synopsis: 'SQL' Case Statement Generator
Description:

Includes built-in methods for generating long SQL CASE statements, and other SQL statements that may otherwise be arduous to construct by hand.The generated statement can easily be concatenated to string literals to form queries to SQL'-like databases, such as when using the RODBC package. The current methods include casewhen() for building CASE statements, inlist() for building IN statements, and updatetable() for building UPDATE statements.

r-slasso 1.0.1
Propagated dependencies: r-rcpparmadillo@15.2.2-1 r-rcpp@1.1.0 r-plot3d@1.4.2 r-matrixstats@1.5.0 r-matrixcalc@1.0-6 r-mass@7.3-65 r-inline@0.3.21 r-fda-usc@2.2.0 r-fda@6.3.0 r-cxxfunplus@1.0.2
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/fabiocentofanti/slasso
Licenses: GPL 3+
Build system: r
Synopsis: S-LASSO Estimator for the Function-on-Function Linear Regression
Description:

This package implements the smooth LASSO estimator for the function-on-function linear regression model described in Centofanti et al. (2022) <doi:10.1016/j.csda.2022.107556>.

r-survivalsurrogate 1.1
Propagated dependencies: r-sparsem@1.84-2 r-rpart@4.1.24 r-rbeta2009@1.0.1 r-purrr@1.2.0 r-mlr3@1.2.0 r-magrittr@2.0.4 r-glue@1.8.0 r-dplyr@1.1.4 r-data-table@1.17.8
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=survivalsurrogate
Licenses: GPL 2+ GPL 3+
Build system: r
Synopsis: Evaluate a Longitudinal Surrogate with a Censored Outcome
Description:

This package provides influence function-based methods to evaluate a longitudinal surrogate marker in a censored time-to-event outcome setting, with plug-in and targeted maximum likelihood estimation options. Details are described in: Agniel D and Parast L (2025). "Robust Evaluation of Longitudinal Surrogate Markers with Censored Data." Journal of the Royal Statistical Society: Series B <doi:10.1093/jrsssb/qkae119>. A tutorial for this package can be found at <https://www.laylaparast.com/survivalsurrogate> and a Shiny App implementing the package can be found at <https://parastlab.shinyapps.io/survivalsurrogateApp/>.

r-selenider 0.4.1
Propagated dependencies: r-withr@3.0.2 r-vctrs@0.6.5 r-rlang@1.1.6 r-prettyunits@1.2.0 r-lifecycle@1.0.4 r-curl@7.0.0 r-coro@1.1.0 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/ashbythorpe/selenider
Licenses: Expat
Build system: r
Synopsis: Concise, Lazy and Reliable Wrapper for 'chromote' and 'selenium'
Description:

This package provides a user-friendly wrapper for web automation, using either chromote or selenium'. Provides a simple and consistent API to make web scraping and testing scripts easy to write and understand. Elements are lazy, and automatically wait for the website to be valid, resulting in reliable and reproducible code, with no visible impact on the experience of the programmer.

r-sqlhelpers 0.1.2
Propagated dependencies: r-toolbox@0.1.1 r-stringi@1.8.7 r-odbc@1.6.4.1 r-dbi@1.2.3 r-data-table@1.17.8
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=sqlHelpers
Licenses: GPL 3+
Build system: r
Synopsis: Collection of 'SQL' Utilities for 'T-SQL' and 'Postgresql'
Description:

Includes functions for interacting with common meta data fields, writing insert statements, calling functions, and more for T-SQL and Postgresql'.

r-scriptname 1.0.1
Propagated dependencies: r-rlang@1.1.6 r-purrr@1.2.0
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/MullinsLab/scriptName
Licenses: Expat
Build system: r
Synopsis: Determine a Script's Filename from Within the Script Itself
Description:

This package provides a small set of functions wrapping up the call stack and command line inspection needed to determine a running script's filename from within the script itself.

r-smlmkalman 0.1.1
Propagated dependencies: r-truncnorm@1.0-9 r-spdep@1.4-1 r-scales@1.4.0 r-pracma@2.4.6
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=smlmkalman
Licenses: GPL 2
Build system: r
Synopsis: Generation and Tracking of Super-Resolution Filamentous Datasets
Description:

This package provides a pair of functions that allow for the generation and tracking of coordinate data clouds without a time dimension, primarily for use in super-resolution plant micro-tubule image segmentation.

r-sig 0.0-6
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://bitbucket.org/richierocks/sig
Licenses: FSDG-compatible
Build system: r
Synopsis: Print Function Signatures
Description:

Print function signatures and find overly complicated code.

r-shark4r 1.0.3
Propagated dependencies: r-worrms@0.4.3 r-vroom@1.6.6 r-tidyr@1.3.1 r-terra@1.8-86 r-stringi@1.8.7 r-sp@2.2-0 r-sf@1.0-23 r-rlang@1.1.6 r-readxl@1.4.5 r-readr@2.1.6 r-purrr@1.2.0 r-lifecycle@1.0.4 r-leaflet@2.2.3 r-jsonlite@2.0.0 r-httr@1.4.7 r-ggplot2@4.0.1 r-dt@0.34.0 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://sharksmhi.github.io/SHARK4R/
Licenses: Expat
Build system: r
Synopsis: Accessing and Validating Marine Environmental Data from 'SHARK' and Related Databases
Description:

This package provides functions to retrieve, process, analyze, and quality-control marine physical, chemical, and biological data. The main focus is on Swedish monitoring data available through the SHARK database <https://shark.smhi.se/en/>, with additional API support for Nordic Microalgae <https://nordicmicroalgae.org/>, Dyntaxa <https://artfakta.se/>, World Register of Marine Species ('WoRMS') <https://www.marinespecies.org>, AlgaeBase <https://www.algaebase.org>, OBIS xylookup web service <https://iobis.github.io/xylookup/> and Intergovernmental Oceanographic Commission (IOC) - UNESCO databases on harmful algae <https://www.marinespecies.org/hab/> and toxins <https://toxins.hais.ioc-unesco.org/>.

r-spatialacc 0.1-5
Propagated dependencies: r-sp@2.2-0
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://stamatisgeoai.eu/
Licenses: GPL 2+
Build system: r
Synopsis: Spatial Accessibility Measures
Description:

This package provides a set of spatial accessibility measures from a set of locations (demand) to another set of locations (supply). It aims, among others, to support research on spatial accessibility to health care facilities. Includes the locations and some characteristics of major public hospitals in Greece.

r-stampr 0.3.1
Propagated dependencies: r-spdep@1.4-1 r-sf@1.0-23 r-rlang@1.1.6 r-lwgeom@0.2-14 r-geosphere@1.5-20 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/jedalong/stampr
Licenses: GPL 3
Build system: r
Synopsis: Spatial Temporal Analysis of Moving Polygons
Description:

Perform spatial temporal analysis of moving polygons; a longstanding analysis problem in Geographic Information Systems. Facilitates directional analysis, distance analysis, and some other simple functionality for examining spatial-temporal patterns of moving polygons.

r-simcross 0.6
Propagated dependencies: r-rcpp@1.1.0
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://kbroman.org/simcross/
Licenses: GPL 3
Build system: r
Synopsis: Simulate Experimental Crosses
Description:

Simulate and plot general experimental crosses. The focus is on simulating genotypes with an aim towards flexibility rather than speed. Meiosis is simulated following the Stahl model, in which chiasma locations are the superposition of two processes: a proportion p coming from a process exhibiting no interference, and the remainder coming from a process following the chi-square model.

r-sptimer 3.3.3
Propagated dependencies: r-spacetime@1.3-3 r-sp@2.2-0 r-extradistr@1.10.0 r-coda@0.19-4.1
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=spTimer
Licenses: GPL 2+
Build system: r
Synopsis: Spatio-Temporal Bayesian Modelling
Description:

Fits, spatially predicts and temporally forecasts large amounts of space-time data using [1] Bayesian Gaussian Process (GP) Models, [2] Bayesian Auto-Regressive (AR) Models, and [3] Bayesian Gaussian Predictive Processes (GPP) based AR Models for spatio-temporal big-n problems. Bakar and Sahu (2015) <doi:10.18637/jss.v063.i15>.

r-stepdownfdp 1.0.0
Propagated dependencies: r-pracma@2.4.6
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/uni-Arya/stepdownfdp
Licenses: Expat
Build system: r
Synopsis: Step-Down Procedure to Control the False Discovery Proportion
Description:

This package provides a step-down procedure for controlling the False Discovery Proportion (FDP) in a competition-based setup, implementing Dong et al. (2020) <arXiv:2011.11939>. Such setups include target-decoy competition (TDC) in computational mass spectrometry and the knockoff construction in linear regression.

r-setariaviridis 0.1.0
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/NONONOexe/setariaviridis
Licenses: Expat
Build system: r
Synopsis: Field-Collected Data of Green Foxtail
Description:

Setaria viridis (green foxtail) is a common weed. This package contains measurements from individual branches of a wild Setaria viridis plant collected near the author's home. The data is intended for use in data analysis practice.

r-ssmutpa 0.1.2
Propagated dependencies: r-survival@3.8-3 r-rcolorbrewer@1.1-3 r-pheatmap@1.0.13 r-nbclust@3.0.1 r-matrix@1.7-4 r-maftools@2.26.0 r-kernlab@0.9-33 r-igraph@2.2.1 r-ggridges@0.5.7 r-ggplot2@4.0.1
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=ssMutPA
Licenses: GPL 2+
Build system: r
Synopsis: Single-Sample Mutation-Based Pathway Analysis
Description:

This package provides a systematic bioinformatics tool to perform single-sample mutation-based pathway analysis by integrating somatic mutation data with the Protein-Protein Interaction (PPI) network. In this method, we use local and global weighted strategies to evaluate the effects of network genes from mutations according to the network topology and then calculate the mutation-based pathway enrichment score (ssMutPES) to reflect the accumulated effect of mutations of each pathway. Subsequently, the ssMutPES profiles are used for unsupervised spectral clustering to identify cancer subtypes.

r-shp2graph 1-0
Propagated dependencies: r-sp@2.2-0 r-igraph@2.2.1
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=shp2graph
Licenses: GPL 2+
Build system: r
Synopsis: Convert a 'SpatialLinesDataFrame' -Class Object to an 'igraph'-Class Object
Description:

This package provides functions for converting and processing network data from a SpatialLinesDataFrame -Class object to an igraph'-Class object.

r-smbdata 0.2.0
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/emitanaka/smbdata
Licenses: GPL 3+
Build system: r
Synopsis: Data from "Statistical Methods in Biology"
Description:

All data in the book "Statistical Methods in Biology" by Welham et al. (2015) <doi:10.1201/b17336> with a corresponding documentation and illustrative analysis of the data.

r-soildb 2.8.13
Propagated dependencies: r-dbi@1.2.3 r-data-table@1.17.8 r-curl@7.0.0 r-aqp@2.3
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/ncss-tech/soilDB/
Licenses: GPL 3+
Build system: r
Synopsis: Soil Database Interface
Description:

This package provides a collection of functions for reading soil data from U.S. Department of Agriculture Natural Resources Conservation Service (USDA-NRCS) and National Cooperative Soil Survey (NCSS) databases.

r-synchwave 1.1.2
Propagated dependencies: r-fields@17.1
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=SynchWave
Licenses: LGPL 2.0+
Build system: r
Synopsis: Synchrosqueezed Wavelet Transform
Description:

The synchrosqueezed wavelet transform is implemented. The package is a translation of MATLAB Synchrosqueezing Toolbox, version 1.1 originally developed by Eugene Brevdo (2012). The C code for curve_ext was authored by Jianfeng Lu, and translated to Fortran by Dongik Jang. Synchrosqueezing is based on the papers: [1] Daubechies, I., Lu, J. and Wu, H. T. (2011) Synchrosqueezed wavelet transforms: An empirical mode decomposition-like tool. Applied and Computational Harmonic Analysis, 30. 243-261. [2] Thakur, G., Brevdo, E., Fukar, N. S. and Wu, H-T. (2013) The Synchrosqueezing algorithm for time-varying spectral analysis: Robustness properties and new paleoclimate applications. Signal Processing, 93, 1079-1094.

r-stdreg2 1.0.3
Propagated dependencies: r-survival@3.8-3 r-generics@0.1.4 r-drgee@1.1.10-4 r-data-table@1.17.8
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://sachsmc.github.io/stdReg2/
Licenses: AGPL 3+
Build system: r
Synopsis: Regression Standardization for Causal Inference
Description:

This package contains more modern tools for causal inference using regression standardization. Four general classes of models are implemented; generalized linear models, conditional generalized estimating equation models, Cox proportional hazards models, and shared frailty gamma-Weibull models. Methodological details are described in Sjölander, A. (2016) <doi:10.1007/s10654-016-0157-3>. Also includes functionality for doubly robust estimation for generalized linear models in some special cases, and the ability to implement custom models.

r-sparselpm 1.0
Propagated dependencies: r-vegan@2.7-2 r-rcpparmadillo@15.2.2-1 r-rcpp@1.1.0 r-gtools@3.9.5
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=SparseLPM
Licenses: GPL 3
Build system: r
Synopsis: The Sparse Latent Position Model for Nonnegative Interaction Data
Description:

Models the nonnegative entries of a rectangular adjacency matrix using a sparse latent position model, as illustrated in Rastelli, R. (2018) "The Sparse Latent Position Model for nonnegative weighted networks" <arXiv:1808.09262>.

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Total results: 68655