This package provides functions for microbiome data analysis that take into account its compositional nature. Performs variable selection through penalized regression for both, cross-sectional and longitudinal studies, and for binary and continuous outcomes.
Find functions in an unstructured directory and explore their dependencies. Sourcing of R source files is performed without side-effects: from R scripts that have executable code and function definitions only functions are sourced.
Computes spatial position models: the potential model as defined by Stewart (1941) <doi:10.1126/science.93.2404.89> and catchment areas as defined by Reilly (1931) or Huff (1964) <doi:10.2307/1249154>.
Plots protein properties and visualizes position of peptide immunogens within protein sequence. Allows evaluation of immunogens based on structural and functional annotations to infer suitability for antibody-based methods aiming to detect native proteins.
This program is derived from comint-mode and provides the following features:
TAB completion same as Node.js REPL
file name completion in string
incremental history search
This library lets elisp authors easily define an idiomatic command to reformat the current buffer using a command-line program, together with an optional minor mode which can apply this command automatically on save.
This package provides a class for typesetting scripts containing both lyrics and prose, in the style used by the student revues (revy) at the Faculties of Science at the University of Copenhagen (uchp).
RegioneReloaded is a package that allows simultaneous analysis of associations between genomic region sets, enabling clustering of data and the creation of ready-to-publish graphs. It takes over and expands on all the features of its predecessor regioneR. It also incorporates a strategy to improve p-value calculations and normalize z-scores coming from multiple analysis to allow for their direct comparison. RegioneReloaded builds upon regioneR by adding new plotting functions for obtaining publication-ready graphs.
Query, extract, and plot genealogical data from The Mathematics Genealogy Project <https://mathgenealogy.org/>. Data is gathered from the WebSocket server run by the geneagrapher-core project <https://github.com/davidalber/geneagrapher-core>.
This crate is a subset of futures that compiles an order of magnitude faster, fixes minor warts in its API, fills in some obvious gaps, and removes almost all unsafe code from it.
This crate is a subset of futures that compiles an order of magnitude faster, fixes minor warts in its API, fills in some obvious gaps, and removes almost all unsafe code from it.
This UNIC component implements algorithms from Unicode Standard Annex #29 - Unicode Text Segmentation, used for detecting boundaries of text element boundaries, such as user-perceived characters (a.k.a. grapheme clusters), words, and sentences.
This crate is a subset of futures that compiles an order of magnitude faster, fixes minor warts in its API, fills in some obvious gaps, and removes almost all unsafe code from it.
Defines the classes used for "class comparison" problems in the OOMPA project (<http://oompa.r-forge.r-project.org/>). Class comparison includes tests for differential expression; see Simon's book for details on typical problem types.
Allows manual creation of themes and logos to be used in applications created using the shinydashboard package. Removes the need to change the underlying css code by wrapping it into a set of convenient R functions.
Summarise patient-level drug utilisation cohorts using data mapped to the Observational Medical Outcomes Partnership (OMOP) common data model. New users and prevalent users cohorts can be generated and their characteristics, indication and drug use summarised.
This grants the functionality of the Maxar Geospatial Platform (MGP) Streaming API. It can search for images using the WFS method. It can Download images using WMS WMTS. It can also Download a full resolution image.
This package takes sample information in the form of the fraction of mutations in each of 96 trinucleotide contexts and identifies the weighted combination of published signatures that, when summed, most closely reconstructs the mutational profile.
This package provides a method for finding an enrichment of cancer simple somatic mutations (SNVs and Indels) in functional elements across the human genome. ActiveDriverWGS detects coding and noncoding driver elements using whole genome sequencing data.
prost-derive handles generating encoding and decoding implementations for Rust types annotated with prost annotation. For the most part, users of prost shouldn't need to interact with prost-derive directly.
prost-derive handles generating encoding and decoding implementations for Rust types annotated with prost annotation. For the most part, users of prost shouldn't need to interact with prost-derive directly.
prost-derive handles generating encoding and decoding implementations for Rust types annotated with prost annotation. For the most part, users of prost shouldn't need to interact with prost-derive directly.
prost-derive handles generating encoding and decoding implementations for Rust types annotated with prost annotation. For the most part, users of prost shouldn't need to interact with prost-derive directly.
prost-derive handles generating encoding and decoding implementations for Rust types annotated with prost annotation. For the most part, users of prost shouldn't need to interact with prost-derive directly.