Exposes an annotation databases generated from UCSC by exposing these as TxDb objects.

This package provides a wallpaper plugin for KDE Plasma that loads images from Wallhaven.

Package amqp091 is an Advanced Message Queuing Protocol 0.9.1 client with RabbitMQ extensions.

robotframework-jsonlibrary is a Robot Framework test library for manipulating JSON Object. You can manipulate your JSON object using JSONPath

This package provides full genome sequences for Drosophila melanogaster (Fly) as provided by UCSC (dm6) and stored in Biostrings objects.

runc is a CLI tool and library for spawning and running containers on Linux according to the OCI specification.

Ristretto is a concurrent, fixed size, in-memory cache with a dual focus on throughput and hit ratio performance.

Full genome sequences for Drosophila melanogaster (Fly) as provided by UCSC (dm2, Apr. 2004) and stored in Biostrings objects.

This package implements a functionality to perform efficient file copies using reflink operations on compatible filesystems such as btrfs and xfs.

Package controllerruntime provides tools to construct Kubernetes-style controllers that manipulate both Kubernetes CRDs and aggregated/built-in Kubernetes APIs.

Full genome sequences for Pan paniscus (Bonobo) as provided by UCSC (panPan2, Dec. 2015) and stored in Biostrings objects.

Full genome sequences for Pan paniscus (Bonobo) as provided by UCSC (panPan1, May 2012) and stored in Biostrings objects.

This package provides full genome sequences for Drosophila melanogaster (Fly) as provided by UCSC (dm3, April 2006) and stored in Biostrings objects.

This package provides an implementation of RDF4J's SAIL API, which stores data on disk in various formats.

Full genome sequences for Macaca fascicularis (long-tailed macaque) as provided by NCBI (Macaca_fascicularis_5.0, 2013-06-12) and stored in Biostrings objects.

Full genome sequences for Macaca fascicularis (Crab-eating macaque) as provided by NCBI (assembly Macaca_fascicularis_6.0, assembly accession GCA_011100615.1) and stored in Biostrings objects.

This package provides a functionality to work with recurrence rules for calendar dates. It offers a complete implementation of the RFC 2445 specification.

Minitest-global_expectations allows continued use of expectation methods on all objects. Calling expectation methods on all objects was deprecated in minitest 5.12, and is planned to be removed from minitest 6.

Replay implements a simple function to trim replies from plain text email, it was inspired by Ruby's project email_reply_trimmer. It's a maintained fork of https://github.com/dimiro1/reply.

Function bipmod() that partitions a bipartite network into non-overlapping biclusters by maximizing bipartite modularity defined in Barber (2007) <doi:10.1103/PhysRevE.76.066102> using the bipartite version of the algorithm described in Treviño (2015) <doi:10.1088/1742-5468/2015/02/P02003>.

go-reuseport enables listening and dialing from the same TCP or UDP port. This means that SO_REUSEADDR and SO_REUSEPORT socket options may be set. This is particularly important when attempting to do TCP NAT hole-punching, which requires a process to both Listen and Dial on the same TCP port. go-reuseport provides some utilities around enabling this behaviour on various operating systems.

Simulating the sequential multi-arm multi-stage or platform trial with Bayesian approach using the rstan package, which provides the R interface for the Stan. This package supports fixed ratio and Bayesian adaptive randomization approaches for randomization. Additionally, it allows for the study of time trend problems in platform trials. There are demos available for a multi-arm multi-stage trial with two different null scenarios, as well as for Bayesian trial cutoff screening. The Bayesian adaptive randomisation approaches are described in: Trippa et al. (2012) <doi:10.1200/JCO.2011.39.8420> and Wathen et al. (2017) <doi:10.1177/1740774517692302>. The randomisation algorithm is described in: Zhao W <doi:10.1016/j.cct.2015.06.008>. The analysis methods of time trend effect in platform trial are described in: Saville et al. (2022) <doi:10.1177/17407745221112013> and Bofill Roig et al. (2022) <doi:10.1186/s12874-022-01683-w>.

This package provides a repository implementation that uses an RDF4J SAIL stack.

Exposes an annotation databases generated from UCSC by exposing these as TxDb objects.