This Emacs package allows you to open a target page on github/gitlab (or bitbucket) by calling browse-at-remote command. It supports dired buffers and opens them in tree mode at destination.
Provides a simple means of reverse-proxying HTTP requests. The raw approach uses the same technique as leveraged by keter, whereas the WAI approach performs full request/response parsing via WAI and http-conduit.
Antitrust analysis of healthcare markets. Contains functions to implement the semiparametric estimation technique described in Raval, Rosenbaum, and Tenn (2017) "A Semiparametric Discrete Choice Model: An Application to Hospital Mergers" <doi:10.1111/ecin.12454>.
This package creates a numeric guide for writing the formula for the determinant of a square matrix (a detguide) as a function of the elements of the matrix and writes out that formula, the symbolic representation.
Aim: Supports the most frequently used methods to combine forecasts. Among others: Simple average, Ordinary Least Squares, Least Absolute Deviation, Constrained Least Squares, Variance-based, Best Individual model, Complete subset regressions and Information-theoretic (information criteria based).
This package provides a system for fitting Logistic Curve by Rhodes Method. Method for fitting logistic curve by Rhodes Method is described in A.M.Gun,M.K.Gupta and B.Dasgupta(2019,ISBN:81-87567-81-3).
This package aims to simplify working with genomic region / interval data by providing a common interface that lets you access a wide selection of file types and formats for handling genomic region data---all using the same syntax.
This package provides a minor mode for renaming buffers according to project structure. For Python buffers, that will be the whole module name. For temporary files and directories, that will be the relative path from the project root.
Support for saving and opening last known pdf position in pdfview mode. Information will be saved relative to the pdf being viewed so ensure pdf-view-restore-filename is in the same directory as the viewing pdf.
This package computes informative enrichment and quality measures for ChIP-seq/DNase-seq/FAIRE-seq/MNase-seq data. It can also be used to obtain robust estimates of the predominant fragment length or characteristic tag shift values in these assays.
Includes the 100 datasets simulated by Congreve and Lamsdell (2016) <doi:10.1111/pala.12236>, and analyses of the partition and quartet distance of reconstructed trees from the generative tree, as analysed by Smith (2019) <doi:10.1098/rsbl.2018.0632>.
This package provides a tm Source to create corpora from articles exported from the Europresse content provider as HTML files. It is able to read both text content and meta-data information (including source, date, title, author and pages).
This package defines an S4 class for storing data from single-cell experiments. This includes specialized methods to store and retrieve spike-in information, dimensionality reduction coordinates and size factors for each cell, along with the usual metadata for genes and libraries.
Calculates the T-Statistic for the drift burst hypothesis from the working paper Christensen, Oomen and Reno (2018) <DOI:10.2139/ssrn.2842535>. The authors MATLAB code is available upon request, see: <https://papers.ssrn.com/sol3/papers.cfm?abstract_id=2842535>.
This package provides a set of predicates and assertions for checking the properties of variables, such as length, names and attributes. This is mainly for use by other package developers who want to include run-time testing features in their own packages.
If the std or alloc features are enabled, this crate provides implementations for Box, Vec, BTreeMap, and BTreeSet. If the std feature is enabled, this crate additionally provides implementations for HashMap and HashSet.
If the std or alloc features are enabled, this crate provides implementations for Box, Vec, BTreeMap, and BTreeSet. If the std feature is enabled, this crate additionally provides implementations for HashMap and HashSet.
Did you ever feel that C-y M-y M-y M-y ... is not a great way of trying to find that piece of text you know you killed a while back? Then browse-kill-ring.el is for you.
Measures the degree of balance for a given phylogenetic tree by calculating the Total Cophenetic Index. Reference: A. Mir, F. Rossello, L. A. Rotger (2013). A new balance index for phylogenetic trees. Math. Biosci. 241, 125-136 <doi:10.1016/j.mbs.2012.10.005>.
Series of algorithms to translate users mental models of seascapes, landscapes and, more generally, of geographic features into computer representations (classifications). Spaces and geographic objects are classified with user-defined rules taking into account spatial data as well as spatial relationships among different classes and objects.
MultiAssayExperiment harmonizes data management of multiple assays performed on an overlapping set of specimens. It provides a familiar Bioconductor user experience by extending concepts from SummarizedExperiment, supporting an open-ended mix of standard data classes for individual assays, and allowing subsetting by genomic ranges or rownames.
Users can build a single shiny app for exploring population characterization, population-level causal effect estimation, and patient-level prediction results generated via the R analyses packages in HADES (see <https://ohdsi.github.io/Hades/>). Learn more about OhdsiShinyAppBuilder at <https://ohdsi.github.io/OhdsiShinyAppBuilder/>.
Package regexp implements regular expression search. The syntax of the regular expressions accepted is the same general syntax used by Perl, Python, and other languages. More precisely, it is the syntax accepted by RE2 and described at https://golang.org/s/re2syntax, except for \C.
Extract results into R from the Observational Health Data Sciences and Informatics result database (see <https://ohdsi.github.io/Strategus/results-schema/index.html>) and generate reports/presentations via quarto that summarize results in HTML format. Learn more about OhdsiReportGenerator at <https://ohdsi.github.io/OhdsiReportGenerator/>.