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Provide a set of wrappers to call all the endpoints of UptimeRobot API which includes various kind of ping, keep-alive and speed tests. See <https://uptimerobot.com/> for more information.
This package provides functions and a Shiny application for downloading, analyzing and visualizing datasets from UCSC Xena (<http://xena.ucsc.edu/>), which is a collection of UCSC-hosted public databases such as TCGA, ICGC, TARGET, GTEx, CCLE, and others.
This package provides methods for managing under- and over-enrollment in Simon's Two-Stage Design are offered by providing adaptive threshold adjustments and sample size recalibration. It also includes post-inference analysis tools to support clinical trial design and evaluation. The package is designed to enhance flexibility and accuracy in trial design, ensuring better outcomes in oncology and other clinical studies. Yunhe Liu, Haitao Pan (2024). Submitted.
This package provides an extension to the Partial Credit Model and Generalized Partial Credit Models which allows for an additional person parameter that characterizes the uncertainty of the person. The method was originally proposed by Tutz and Schauberger (2020) <doi:10.1177/0146621620920932>.
Data from Unicode 16.0.0 and related utilities.
UNIfied Cross-Omics deconvolution (Unico) deconvolves standard 2-dimensional bulk matrices of samples by features into a 3-dimensional tensors representing samples by features by cell types. Unico stands out as the first principled model-based deconvolution method that is theoretically justified for any heterogeneous genomic data. For more details see Chen and Rahmani et al. (2024) <doi:10.1101/2024.01.27.577588>.
This package provides functions for converting between UK and US spellings of English words.
Three functions are provided: first function changes time from local to UTC, other changes from UTC to local and third returns difference between local and UTC. %h+% operator is also provided it adds hours to a time.
This package provides a framework for estimating difference-in-differences with unpoolable data, based on Karim, Webb, Austin, and Strumpf (2025) <doi:10.48550/arXiv.2403.15910>. Supports common or staggered adoption, multiple groups, and the inclusion of covariates. Also computes p-values for the aggregate average treatment effect on the treated via the randomization inference procedure described in MacKinnon and Webb (2020) <doi:10.1016/j.jeconom.2020.04.024>.
Obtain United States map data frames of varying region types (e.g. county, state). The map data frames include Alaska and Hawaii conveniently placed to the bottom left, as they appear in most maps of the US. Convenience functions for plotting choropleths, visualizing spatial data, and working with FIPS codes are also provided.
The Universal Scalability Law (Gunther 2007) <doi:10.1007/978-3-540-31010-5> is a model to predict hardware and software scalability. It uses system capacity as a function of load to forecast the scalability for the system.
This package provides functions to implement the methods of the Flood Estimation Handbook (FEH), associated updates and the revitalised flood hydrograph model (ReFH). Currently the package uses NRFA peak flow dataset version 14. Aside from FEH functionality, further hydrological functions are available. Most of the methods implemented in this package are described in one or more of the following: "Flood Estimation Handbook", Centre for Ecology & Hydrology (1999, ISBN:0 948540 94 X). "Flood Estimation Handbook Supplementary Report No. 1", Kjeldsen (2007, ISBN:0 903741 15 7). "Regional Frequency Analysis - an approach based on L-moments", Hosking & Wallis (1997, ISBN: 978 0 521 01940 8). "Making better use of local data in flood frequency estimation", Environment Agency (2017, ISBN: 978 1 84911 387 8). "Sampling uncertainty of UK design flood estimation" , Hammond (2021, <doi:10.2166/nh.2021.059>). "The FEH 2025 statistical method update", UK Centre for Ecology and Hydrology (2025). "Low flow estimation in the United Kingdom", Institute of Hydrology (1992, ISBN 0 948540 45 1). Data from the UK National River Flow Archive (<https://nrfa.ceh.ac.uk/>, terms and conditions: <https://nrfa.ceh.ac.uk/help/costs-terms-and-conditions>).
Assess the significance of identified clusters and estimates the true number of clusters by comparing the explained variation due to the clustering from the original data to that produced by clustering a unimodal reference distribution which preserves the covariance structure in the data. The reference distribution is generated using kernel density estimation and a Gaussian copula framework. A dimension reduction strategy and sparse covariance estimation optimize this method for the high-dimensional, low-sample size setting. This method is described in Helgeson, Vock, and Bair (2021) <doi:10.1111/biom.13376>.
This program realizes a universal estimation approach that accommodates multi-category variables and effect scales, making up for the deficiencies of the existing approaches when dealing with non-binary exposures and complex models. The estimation via bootstrapping can simultaneously provide results of causal mediation on risk difference (RD), odds ratio (OR) and risk ratio (RR) scales with tests of the effects difference. The estimation is also applicable to many other settings, e.g., moderated mediation, inconsistent covariates, panel data, etc. The high flexibility and compatibility make it possible to apply for any type of model, greatly meeting the needs of current empirical researches.
Algorithms for checking the accuracy of a clustering result with known classes, computing cluster validity indices, and generating plots for comparing them. The package is compatible with K-means, fuzzy C means, EM clustering, and hierarchical clustering (single, average, and complete linkage). The details of the indices in this package can be found in: J. C. Bezdek, M. Moshtaghi, T. Runkler, C. Leckie (2016) <doi:10.1109/TFUZZ.2016.2540063>, T. Calinski, J. Harabasz (1974) <doi:10.1080/03610927408827101>, C. H. Chou, M. C. Su, E. Lai (2004) <doi:10.1007/s10044-004-0218-1>, D. L. Davies, D. W. Bouldin (1979) <doi:10.1109/TPAMI.1979.4766909>, J. C. Dunn (1973) <doi:10.1080/01969727308546046>, F. Haouas, Z. Ben Dhiaf, A. Hammouda, B. Solaiman (2017) <doi:10.1109/FUZZ-IEEE.2017.8015651>, M. Kim, R. S. Ramakrishna (2005) <doi:10.1016/j.patrec.2005.04.007>, S. H. Kwon (1998) <doi:10.1049/EL:19981523>, S. H. Kwon, J. Kim, S. H. Son (2021) <doi:10.1049/ell2.12249>, G. W. Miligan (1980) <doi:10.1007/BF02293907>, M. K. Pakhira, S. Bandyopadhyay, U. Maulik (2004) <doi:10.1016/j.patcog.2003.06.005>, M. Popescu, J. C. Bezdek, T. C. Havens, J. M. Keller (2013) <doi:10.1109/TSMCB.2012.2205679>, S. Saitta, B. Raphael, I. Smith (2007) <doi:10.1007/978-3-540-73499-4_14>, A. Starczewski (2017) <doi:10.1007/s10044-015-0525-8>, Y. Tang, F. Sun, Z. Sun (2005) <doi:10.1109/ACC.2005.1470111>, N. Wiroonsri (2024) <doi:10.1016/j.patcog.2023.109910>, N. Wiroonsri, O. Preedasawakul (2023) <doi:10.48550/arXiv.2308.14785>, C. H. Wu, C. S. Ouyang, L. W. Chen, L. W. Lu (2015) <doi:10.1109/TFUZZ.2014.2322495>, X. Xie, G. Beni (1991) <doi:10.1109/34.85677> and Rousseeuw (1987) and Kaufman and Rousseeuw(2009) <doi:10.1016/0377-0427(87)90125-7> and <doi:10.1002/9780470316801> C. Alok. (2010).
Create United Nations High Commissioner for Refugees (UNHCR) branded documents, presentations, and reports using R Markdown templates. This package provides customized formats that align with UNHCR's official brand guidelines for creating professional PDF reports, Word documents, PowerPoint presentations, and HTML outputs.
This package provides a test to understand the stability of the underlying stochastic data. Helps the userĂ¢ s understand whether the random variable under consideration is stationary or non-stationary without any manual interpretation of the results. It further ensures to check all the prerequisites and assumptions which are underlying the unit root test statistics and if the underlying data is found to be non-stationary in all the 4 lags the function diagnoses the input data and returns with an optimised solution on the same.
Automatically converts language-specific verbal information, e.g., "1st half of the 19th century," to its standardized numerical counterparts, e.g., "1801-01-01/1850-12-31." It follows the recommendations of the MIDAS ('Marburger Informations-, Dokumentations- und Administrations-System'), see <doi:10.11588/artdok.00003770>.
Wraps the unrtf utility <https://www.gnu.org/software/unrtf/> to extract text from RTF files. Supports document conversion to HTML, LaTeX or plain text. Output in HTML is recommended because unrtf has limited support for converting between character encodings.
Model data with a suspected clustering structure (either in co-variate space, regression space or both) using a Bayesian product model with a logistic regression likelihood. Observations are represented graphically and clusters are formed through various edge removals or additions. Cluster quality is assessed through the log Bayesian evidence of the overall model, which is estimated using either a Sequential Monte Carlo sampler or a suitable transformation of the Bayesian Information Criterion as a fast approximation of the former. The internal Iterated Batch Importance Sampling scheme (Chopin (2002 <doi:10.1093/biomet/89.3.539>)) is made available as a free standing function.
UpSet.js is a re-implementation of UpSetR to create interactive set visualizations for more than three sets. This is a htmlwidget wrapper around the JavaScript library UpSet.js'.
Supervised classification methods, which (if asked) can provide step-by-step explanations of the algorithms used, as described in PK Josephine et. al., (2021) <doi:10.59176/kjcs.v1i1.1259>; and datasets to test them on, which highlight the strengths and weaknesses of each technique.
This package provides tools for fitting and assessing Bayesian multilevel regression models that account for unmeasured confounders.
Displays percentage changes by height and absolute changes by area for up to three nested or non-nested levels. The plots visualise changes in indices and markets, showing how the changes for sectors or for individual components contribute to the overall change. Data can be classified by up to three levels of grouping variables in a layered, hierarchical plot. Each level can be ordered in several ways including by baseline, by percentage change, and by absolute change. The vignettes give examples.