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/_/ /      / / /____\/ /       \ \_\\ \/___/ /
\_\/       \/_________/         \/_/ \_____\/

Enter the query into the form above. You can look for specific version of a package by using @ symbol like this: gcc@10.

API method:

GET /api/packages?search=hello&page=1&limit=20

where search is your query, page is a page number and limit is a number of items on a single page. Pagination information (such as a number of pages and etc) is returned in response headers.

If you'd like to join our channel webring send a patch to ~whereiseveryone/toys@lists.sr.ht adding your channel as an entry in channels.scm.


r-tripestimation 0.0-46
Propagated dependencies: r-zoo@1.8-14 r-sp@2.2-0 r-reproj@0.7.0 r-mgcv@1.9-4 r-lattice@0.22-7
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/Trackage/tripEstimation
Licenses: GPL 3
Build system: r
Synopsis: Metropolis Sampler and Supporting Functions for Estimating Animal Movement from Archival Tags and Satellite Fixes
Description:

Data handling and estimation functions for animal movement estimation from archival or satellite tags. Helper functions are included for making image summaries binned by time interval from Markov Chain Monte Carlo simulations.

r-tbest 5.2
Propagated dependencies: r-signal@1.8-1 r-fdrtool@1.2.18
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=TBEST
Licenses: GPL 2
Build system: r
Synopsis: Tree Branches Evaluated Statistically for Tightness
Description:

Our method introduces mathematically well-defined measures for tightness of branches in a hierarchical tree. Statistical significance of the findings is determined, for all branches of the tree, by performing permutation tests, optionally with generalized Pareto p-value estimation.

r-tinytiger 0.0.11
Propagated dependencies: r-sf@1.0-23 r-glue@1.8.0 r-curl@7.0.0 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/alarm-redist/tinytiger
Licenses: Expat
Build system: r
Synopsis: Lightweight Interface to TIGER/Line Shapefiles
Description:

Download geographic shapes from the United States Census Bureau TIGER/Line Shapefiles <https://www.census.gov/geographies/mapping-files/time-series/geo/tiger-line-file.html>. Functions support downloading and reading in geographic boundary data. All downloads can be set up with a cache to avoid multiple downloads. Data is available back to 2000 for most geographies.

r-tidysummary 0.1.0
Propagated dependencies: r-tidyr@1.3.1 r-tidyplots@0.4.0 r-tibble@3.3.0 r-stringr@1.6.0 r-rlang@1.1.6 r-qqplotr@0.0.7 r-glue@1.8.0 r-fbasics@4041.97 r-dplyr@1.1.4 r-cli@3.6.5 r-car@3.1-3
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=tidysummary
Licenses: Expat
Build system: r
Synopsis: An Elegant Approach to Summarizing Clinical Data
Description:

Streamlines the analysis of clinical data by automatically selecting appropriate statistical descriptions and inference methods based on variable types. For method details see Motulsky H J (2016) <https://www.graphpad.com/guides/prism/10/statistics/index.htm> and d'Agostino R B (1971) <doi:10.1093/biomet/58.2.341>.

r-twosampletest-hd 1.2
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=TwoSampleTest.HD
Licenses: GPL 2
Build system: r
Synopsis: Two-Sample Test for the Equality of Distributions for High-Dimensional Data
Description:

For high-dimensional data whose main feature is a large number, p, of variables but a small sample size, the null hypothesis that the marginal distributions of p variables are the same for two groups is tested. We propose a test statistic motivated by the simple idea of comparing, for each of the p variables, the empirical characteristic functions computed from the two samples. If one rejects this global null hypothesis of no differences in distributions between the two groups, a set of permutation p-values is reported to identify which variables are not equally distributed in both groups.

r-transp 0.1
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/Somenath24/TransP
Licenses: GPL 2+
Build system: r
Synopsis: Implementation of Transportation Problem Algorithms
Description:

Implementation of two transportation problem algorithms. 1. North West Corner Method 2. Minimum Cost Method or Least cost method. For more technical details about the algorithms please refer below URLs. <http://www.universalteacherpublications.com/univ/ebooks/or/Ch5/nw.htm>. <http://personal.maths.surrey.ac.uk/st/J.F/chapter7.pdf>.

r-tern 0.9.10
Propagated dependencies: r-tidyr@1.3.1 r-tibble@3.3.0 r-survival@3.8-3 r-scales@1.4.0 r-rtables@0.6.15 r-rlang@1.1.6 r-rdpack@2.6.4 r-nestcolor@0.1.3 r-mass@7.3-65 r-magrittr@2.0.4 r-lifecycle@1.0.4 r-labeling@0.4.3 r-gtable@0.3.6 r-gridextra@2.3 r-ggplot2@4.0.1 r-formatters@0.5.12 r-forcats@1.0.1 r-emmeans@2.0.0 r-dplyr@1.1.4 r-cowplot@1.2.0 r-checkmate@2.3.3 r-car@3.1-3 r-broom@1.0.10
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://insightsengineering.github.io/tern/
Licenses: ASL 2.0
Build system: r
Synopsis: Create Common TLGs Used in Clinical Trials
Description:

Table, Listings, and Graphs (TLG) library for common outputs used in clinical trials.

r-trialsize 1.4.1
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=TrialSize
Licenses: FSDG-compatible
Build system: r
Synopsis: R Functions for Chapter 3,4,6,7,9,10,11,12,14,15 of Sample Size Calculation in Clinical Research
Description:

This package provides functions and Examples in Sample Size Calculation in Clinical Research.

r-tmod 0.50.13
Propagated dependencies: r-xml@3.99-0.20 r-tidyselect@1.2.1 r-tidyr@1.3.1 r-tibble@3.3.0 r-tagcloud@0.7.0 r-rlang@1.1.6 r-rcolorbrewer@1.1-3 r-purrr@1.2.0 r-plotwidgets@0.5.1 r-pheatmap@1.0.13 r-gplots@3.2.0 r-ggrepel@0.9.6 r-ggplot2@4.0.1 r-beeswarm@0.4.0
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://tmod.online
Licenses: GPL 2+
Build system: r
Synopsis: Feature Set Enrichment Analysis for Metabolomics and Transcriptomics
Description:

This package provides methods and feature set definitions for feature or gene set enrichment analysis in transcriptional and metabolic profiling data. Package includes tests for enrichment based on ranked lists of features, functions for visualisation and multivariate functional analysis. See Zyla et al (2019) <doi:10.1093/bioinformatics/btz447>.

r-tropalgebra 0.1.1
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=tropAlgebra
Licenses: GPL 3+
Build system: r
Synopsis: Tropical Algebraic Functions
Description:

It includes functions like tropical addition, tropical multiplication for vectors and matrices. In tropical algebra, the tropical sum of two numbers is their minimum and the tropical product of two numbers is their ordinary sum. For more information see also I. Simon (1988) Recognizable sets with multiplicities in the tropical semi ring: Volume 324 Lecture Notes I Computer Science, pages 107-120 <doi: 10.1007/BFb0017135>.

r-tdsc 1.0.4
Propagated dependencies: r-moments@0.14.1 r-data-table@1.17.8
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=tdsc
Licenses: GPL 3
Build system: r
Synopsis: Time Domain Signal Coding
Description:

This package provides functions for performing time domain signal coding as used in Chesmore (2001) <doi:10.1016/S0003-682X(01)00009-3>, and related tasks. This package creates the standard S-matrix and A-matrix (with variable lag), has tools to convert coding matrices into distributed matrices, provides published codebooks and allows for extraction of code sequences.

r-twostepclogit 1.2.6
Propagated dependencies: r-survival@3.8-3
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=TwoStepCLogit
Licenses: GPL 2
Build system: r
Synopsis: Conditional Logistic Regression: A Two-Step Estimation Method
Description:

Conditional logistic regression with longitudinal follow up and individual-level random coefficients: A stable and efficient two-step estimation method.

r-treeringshape 3.0.5
Propagated dependencies: r-tibble@3.3.0 r-sf@1.0-23
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://CRAN.R-project.org/package=TreeRingShape
Licenses: GPL 2+
Build system: r
Synopsis: Recording Tree-Ring Shapes of Tree Disks with Manual Digitizing and Interpolating Model
Description:

Record all tree-ring Shapefile of tree disk with GIS soft Qgis and interpolating model from high resolution tree disk image.

r-timeroc 0.4
Propagated dependencies: r-pec@2025.06.24 r-mvtnorm@1.3-3
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=timeROC
Licenses: GPL 2+
Build system: r
Synopsis: Time-Dependent ROC Curve and AUC for Censored Survival Data
Description:

Estimation of time-dependent ROC curve and area under time dependent ROC curve (AUC) in the presence of censored data, with or without competing risks. Confidence intervals of AUCs and tests for comparing AUCs of two rival markers measured on the same subjects can be computed, using the iid-representation of the AUC estimator. Plot functions for time-dependent ROC curves and AUC curves are provided. Time-dependent Positive Predictive Values (PPV) and Negative Predictive Values (NPV) can also be computed. See Blanche et al. (2013) <doi:10.1002/sim.5958> and references therein for the details of the methods implemented in the package.

r-tchazards 1.1.5
Propagated dependencies: r-terra@1.8-86 r-sp@2.2-0 r-rcpp@1.1.0 r-rastervis@0.51.7 r-raster@3.6-32 r-ncdf4@1.24 r-latticeextra@0.6-31 r-geosphere@1.5-20
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/AusClimateService/TCHazaRds
Licenses: GPL 3+
Build system: r
Synopsis: Tropical Cyclone (Hurricane, Typhoon) Spatial Hazard Modelling
Description:

This package provides methods for generating modelled parametric Tropical Cyclone (TC) spatial hazard fields and time series output at point locations from TC tracks. R's compatibility to simply use fast cpp code via the Rcpp package and the wide range spatial analysis tools via the terra package makes it an attractive open source environment to study TCs'. This package estimates TC vortex wind and pressure fields using parametric equations originally coded up in python by TCRM <https://github.com/GeoscienceAustralia/tcrm> and then coded up in Cuda cpp by TCwindgen <https://github.com/CyprienBosserelle/TCwindgen>.

r-tepr 1.1.15
Propagated dependencies: r-valr@0.8.4 r-tidyselect@1.2.1 r-tidyr@1.3.1 r-tibble@3.3.0 r-rtracklayer@1.70.0 r-rlang@1.1.6 r-purrr@1.2.0 r-pracma@2.4.6 r-matrixstats@1.5.0 r-mass@7.3-65 r-magrittr@2.0.4 r-ggrepel@0.9.6 r-ggplot2@4.0.1 r-genomicranges@1.62.0 r-genomeinfodb@1.46.0 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=tepr
Licenses: GPL 3
Build system: r
Synopsis: Transcription Elongation Profiling
Description:

The general principle relies on calculating the cumulative signal of nascent RNA sequencing over the gene body of any given gene or transcription unit. tepr can identify transcription attenuation sites by comparing profile to a null model which assumes uniform read density over the entirety of the transcription unit. It can also identify increased or diminished transcription attenuation by comparing two conditions. Besides rigorous statistical testing and high sensitivity, a major feature of tepr is its ability to provide the elongation pattern of each individual gene, including the position of the main attenuation point when such a phenomenon occurs. Using tepr', users can visualize and refine genome-wide aggregated analyses of elongation patterns to robustly identify effects specific to subsets of genes. These metrics are suitable for internal comparisons (between genes in each condition) and for studying elongation of the same gene in different conditions or comparing it to a perfect theoretical uniform elongation.

r-tlagpropodds 1.10
Propagated dependencies: r-survival@3.8-3 r-r-utils@2.13.0 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=tLagPropOdds
Licenses: GPL 2
Build system: r
Synopsis: Proportional Odds Model with Censored, Time-Lagged Categorical Outcome
Description:

This package implements a semiparametric estimator for the odds ratio model with censored, time-lagged, ordered categorical outcome in a randomized clinical trial that incorporates baseline and time-dependent information. Tsiatis AA, Davidian M, Holloway ST (2023) <doi:10.1111/biom.13603>.

r-treasury 0.4.0
Propagated dependencies: r-xml2@1.5.0 r-httr2@1.2.1 r-data-table@1.17.8 r-curl@7.0.0
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://m-muecke.github.io/treasury/
Licenses: Expat
Build system: r
Synopsis: Client for US Treasury XML Feed and Published Data
Description:

Download daily interest rates from the US Treasury XML feed. Leveraging <https://home.treasury.gov/treasury-daily-interest-rate-xml-feed>, this package serves as a wrapper, facilitating the retrieval of daily treasury rates across various categories, including par yield curves, treasury bills, long-term rates, and real yield curves.

r-tabularmlc 0.0.4
Propagated dependencies: r-rcpparmadillo@15.2.2-1 r-rcpp@1.1.0
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/caiohamamura/tabularMLC
Licenses: GPL 3
Build system: r
Synopsis: Tabular Maximum Likelihood Classifier
Description:

The maximum likelihood classifier (MLC) is one of the most common classifiers used for remote sensing imagery. This package uses RcppArmadillo to provide a fast implementation of the MLC to train and predict over tabular data (data.frame). The algorithms were based on Mather (1985) <doi:10.1080/01431168508948456> method.

r-textminer 3.0.6
Propagated dependencies: r-text2vec@0.6.4 r-stringr@1.6.0 r-stopwords@2.3 r-rspectra@0.16-2 r-rcppprogress@0.4.2 r-rcpparmadillo@15.2.2-1 r-rcpp@1.1.0 r-matrix@1.7-4 r-magrittr@2.0.4 r-gtools@3.9.5
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://www.rtextminer.com/
Licenses: Expat
Build system: r
Synopsis: Functions for Text Mining and Topic Modeling
Description:

An aid for text mining in R, with a syntax that should be familiar to experienced R users. Provides a wrapper for several topic models that take similarly-formatted input and give similarly-formatted output. Has additional functionality for analyzing and diagnostics for topic models.

r-tsqca 1.3.1
Propagated dependencies: r-qca@3.23
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/im-research-yt/TSQCA
Licenses: Expat
Build system: r
Synopsis: Threshold Sweep Extensions for Qualitative Comparative Analysis
Description:

This package provides threshold sweep methods for Qualitative Comparative Analysis (QCA). Implements Condition Threshold Sweep-Single (CTS-S), Condition Threshold Sweep-Multiple (CTS-M), Outcome Threshold Sweep (OTS), and Dual Threshold Sweep (DTS) for systematic exploration of threshold calibration effects on crisp-set QCA results. These methods extend traditional robustness approaches by treating threshold variation as an exploratory tool for discovering causal structures. Built on top of the QCA package by Dusa (2019) <doi:10.1007/978-3-319-75668-4>, with function arguments following QCA conventions. Based on set-theoretic methods by Ragin (2008) <doi:10.7208/chicago/9780226702797.001.0001> and established robustness protocols by Rubinson et al. (2019) <doi:10.1177/00491241211036158>.

r-trendtm 2.0.21
Propagated dependencies: r-softimpute@1.4-3 r-fda@6.3.0 r-capushe@1.1.3
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=TrendTM
Licenses: GPL 3
Build system: r
Synopsis: Trend of High-Dimensional Time Series Matrix Estimation
Description:

Matrix factorization for multivariate time series with both low rank and temporal structures. The procedure is the one proposed by Alquier, P. and Marie, N. "Matrix factorization for multivariate time series analysis." Electronic Journal of Statistics, 13(2), 4346-4366 (2019).

r-texttinyr 1.1.8
Propagated dependencies: r-rcpparmadillo@15.2.2-1 r-rcpp@1.1.0 r-r6@2.6.1 r-matrix@1.7-4 r-data-table@1.17.8 r-bh@1.87.0-1
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/mlampros/textTinyR
Licenses: GPL 3
Build system: r
Synopsis: Text Processing for Small or Big Data Files
Description:

It offers functions for splitting, parsing, tokenizing and creating a vocabulary for big text data files. Moreover, it includes functions for building a document-term matrix and extracting information from those (term-associations, most frequent terms). It also embodies functions for calculating token statistics (collocations, look-up tables, string dissimilarities) and functions to work with sparse matrices. Lastly, it includes functions for Word Vector Representations (i.e. GloVe', fasttext') and incorporates functions for the calculation of (pairwise) text document dissimilarities. The source code is based on C++11 and exported in R through the Rcpp', RcppArmadillo and BH packages.

r-tbrdist 1.0.3
Propagated dependencies: r-treetools@2.1.0 r-treedist@2.12.0 r-rdpack@2.6.4 r-rcpp@1.1.0 r-bh@1.87.0-1 r-ape@5.8-1
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://ms609.github.io/TBRDist/
Licenses: GPL 3+
Build system: r
Synopsis: Rearrangement Distances Between Unrooted Phylogenetic Trees
Description:

Fast calculation of the Subtree Prune and Regraft (SPR), Tree Bisection and Reconnection (TBR) and Replug distances between unrooted trees, using the algorithms of Whidden and Matsen (2017) <doi:10.48550/arXiv.1511.07529>.

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Total results: 69112