_            _    _        _         _
      /\ \         /\ \ /\ \     /\_\      / /\
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      /\__ \     / /\ \ \\ \ \_/ / /     / / /\ \__
     / /_ \ \   / / /\ \ \\ \___/ /     / / /\ \___\
    / / /\ \ \ / / /  \ \_\\ \ \_/      \ \ \ \/___/
   / / /  \/_// / /   / / / \ \ \        \ \ \
  / / /      / / /   / / /   \ \ \   _    \ \ \
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/_/ /      / / /____\/ /       \ \_\\ \/___/ /
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r-txdb-athaliana-biomart-plantsmart28 3.2.2
Propagated dependencies: r-genomicfeatures@1.64.0 r-annotationdbi@1.74.0
Channel: guix-bioc
Location: guix-bioc/packages/t.scm (guix-bioc packages t)
Home page: https://bioconductor.org/packages/TxDb.Athaliana.BioMart.plantsmart28
Licenses: Artistic License 2.0
Build system: r
Synopsis: Annotation package for TxDb object(s)
Description:

Exposes an annotation databases generated from BioMart by exposing these as TxDb objects.

r-txdb-athaliana-biomart-plantsmart25 3.1.3
Propagated dependencies: r-genomicfeatures@1.64.0 r-annotationdbi@1.74.0
Channel: guix-bioc
Location: guix-bioc/packages/t.scm (guix-bioc packages t)
Home page: https://bioconductor.org/packages/TxDb.Athaliana.BioMart.plantsmart25
Licenses: Artistic License 2.0
Build system: r
Synopsis: Annotation package for TxDb object(s)
Description:

Exposes an annotation databases generated from BioMart by exposing these as TxDb objects.

r-txdb-dmelanogaster-ucsc-dm3-ensgene 3.2.2
Propagated dependencies: r-annotationdbi@1.74.0 r-genomicfeatures@1.64.0
Channel: guix
Location: gnu/packages/bioconductor.scm (gnu packages bioconductor)
Home page: https://bioconductor.org/packages/TxDb.Dmelanogaster.UCSC.dm3.ensGene
Licenses: Artistic License 2.0
Build system: r
Synopsis: Annotation package for TxDb object(s)
Description:

This package exposes an annotation databases generated from UCSC by exposing these as TxDb objects.

go-github-com-sassoftware-go-rpmutils 0.4.0
Propagated dependencies: go-github-com-datadog-zstd@1.5.7 go-github-com-klauspost-compress@1.18.0 go-github-com-protonmail-go-crypto@1.3.0-0.a8cc4f0 go-github-com-ulikunitz-xz@0.5.12 go-github-com-xi2-xz@0.0.0-20171230120015-48954b6210f8 go-golang-org-x-sys@0.46.0
Channel: guix
Location: gnu/packages/golang-compression.scm (gnu packages golang-compression)
Home page: https://github.com/sassoftware/go-rpmutils
Licenses: ASL 2.0
Build system: go
Synopsis: Parse RPM packages in Golang
Description:

This package provides some Golang interfaces for handling RPM packages, such extracting RPM header and CPIO content.

node-react-native-community-cli-clean 13.5.1
Dependencies: node-react-native-community-cli-tools@13.5.1 node-execa@5.1.1 node-chalk@4.1.2 node-glob@7.2.3
Channel: guix-science
Location: guix-science/packages/rstudio-node.scm (guix-science packages rstudio-node)
Home page: https://github.com/react-native-community/cli/tree/main/packages/cli-clean
Licenses: Expat
Build system: node
Synopsis: This package is part of the [React Native CLI](../../README.md). It contains commands for cleaning the build artifacts.
Description:

This package is part of the [React Native CLI](../../README.md). It contains commands for cleaning the build artifacts.

go-github-com-sigstore-rekor-tiles-v2 2.0.1
Propagated dependencies: go-cloud-google-com-go-spanner@1.91.0 go-cloud-google-com-go-storage@1.60.0 go-github-com-aws-aws-sdk-go-v2@1.41.7 go-github-com-aws-aws-sdk-go-v2-config@1.32.17 go-github-com-aws-aws-sdk-go-v2-credentials@1.19.7 go-github-com-aws-aws-sdk-go-v2-service-s3@1.96.0 go-github-com-aws-smithy-go@1.24.0 go-github-com-cyberphone-json-canonicalization@0.0.0-20241213102144-19d51d7fe467 go-github-com-grpc-ecosystem-go-grpc-middleware@1.4.0 go-github-com-grpc-ecosystem-go-grpc-middleware-providers-prometheus@1.1.0 go-github-com-grpc-ecosystem-go-grpc-middleware-v2@2.3.4 go-github-com-grpc-ecosystem-grpc-gateway-v2@2.26.3 go-github-com-prometheus-client-golang@1.23.2 go-github-com-secure-systems-lab-go-securesystemslib@0.10.0 go-github-com-sigstore-protobuf-specs@0.5.0 go-github-com-sigstore-sigstore@1.10.4 go-github-com-sigstore-sigstore-pkg-signature-kms-aws@1.10.5 go-github-com-chainguard-dev-clog@1.8.0 go-github-com-sigstore-sigstore-pkg-signature-kms-gcp@1.10.5 go-github-com-tink-crypto-tink-go-awskms-v2@2.1.0 go-github-com-tink-crypto-tink-go-gcpkms-v2@2.2.0 go-github-com-tink-crypto-tink-go-v2@2.6.0 go-github-com-transparency-dev-formats@0.0.0-20251222000000-0e991b4666d9 go-github-com-transparency-dev-merkle@0.0.2 go-github-com-transparency-dev-tessera@1.0.2 go-go-opentelemetry-io-otel@1.42.0 go-go-opentelemetry-io-otel-exporters-prometheus@0.62.0 go-go-opentelemetry-io-otel-sdk-metric@1.33.0 go-golang-org-x-exp@0.0.0-20250911091902-df9299821621 go-golang-org-x-mod@0.35.0 go-golang-org-x-sync@0.21.0 go-google-golang-org-api@0.272.0 go-google-golang-org-genproto-googleapis-api@0.0.0-20250519155744-55703ea1f237 go-google-golang-org-grpc@1.69.2 go-google-golang-org-protobuf@1.36.11 go-k8s-io-klog-v2@2.130.1
Channel: guix
Location: gnu/packages/golang-web.scm (gnu packages golang-web)
Home page: https://github.com/sigstore/rekor-tiles
Licenses: ASL 2.0
Build system: go
Synopsis: Tile-based transparency log for Sigstore
Description:

This package provides a tile-based implementation of a transparency log for the Sigstore ecosystem, supporting efficient verification of log entries.

r-bsgenome-amellifera-ncbi-amelhav3-1 1.5.0
Propagated dependencies: r-bsgenome@1.80.0
Channel: guix-bioc
Location: guix-bioc/packages/b.scm (guix-bioc packages b)
Home page: https://bioconductor.org/packages/BSgenome.Amellifera.NCBI.AmelHAv3.1
Licenses: Artistic License 2.0
Build system: r
Synopsis: Full genome sequences for Apis mellifera (Amel_HAv3.1)
Description:

Full genome sequences for Apis mellifera as provided by NCBI (assembly Amel_HAv3.1, assembly accession GCF_003254395.2) and stored in Biostrings objects.

go-github-com-leodido-ragel-machinery 0.0.0-20190525184631-5f46317e436b
Channel: guix
Location: gnu/packages/golang-xyz.scm (gnu packages golang-xyz)
Home page: https://github.com/leodido/ragel-machinery
Licenses: Expat
Build system: go
Synopsis: Ragel machinery in Go
Description:

This package provides machineries to speed up and facilitate the development of ragel parsers able to accept streaming inputs.

r-txdb-athaliana-biomart-plantsmart51 0.99.0
Propagated dependencies: r-genomicfeatures@1.64.0 r-annotationdbi@1.74.0
Channel: guix-bioc
Location: guix-bioc/packages/t.scm (guix-bioc packages t)
Home page: https://bioconductor.org/packages/TxDb.Athaliana.BioMart.plantsmart51
Licenses: Artistic License 2.0
Build system: r
Synopsis: Annotation package for TxDb object(s)
Description:

Exposes an annotation databases generated from BioMart by exposing these as TxDb objects. This package is for Arabidopsis thaliana (taxID: 3702). The BioMart plantsmart release number is 51.

go-github-com-internxt-rclone-adapter 0.0.0-20260904121407-404a75f3d031
Propagated dependencies: go-github-com-tyler-smith-go-bip39@1.1.0 go-golang-org-x-crypto@0.53.0 go-golang-org-x-image@0.32.0
Channel: guix
Location: gnu/packages/golang-web.scm (gnu packages golang-web)
Home page: https://github.com/internxt/rclone-adapter
Licenses: Expat
Build system: go
Synopsis: Internxt Drive API in Go
Description:

This package provides a pure Go library allowing you to interact with the Internxt Drive API. It's a clone of https://github.com/StarHack/go-internxt-drive.

go-github-com-jsimonetti-rtnetlink-v2 2.0.2
Propagated dependencies: go-github-com-mdlayher-netlink@1.7.2 go-golang-org-x-sys@0.46.0
Channel: guix
Location: gnu/packages/golang-web.scm (gnu packages golang-web)
Home page: https://github.com/jsimonetti/rtnetlink
Licenses: Expat
Build system: go
Synopsis: Low-level access to the Linux rtnetlink API
Description:

This package allows the kernel's routing tables to be read and altered. Network routes, IP addresses, Link parameters, Neighbor setups,Queueing disciplines, Traffic classes and Packet classifiers may all be controlled. It is based on netlink messages.

r-bsgenome-mmusculus-ucsc-mm10-masked 1.4.3
Propagated dependencies: r-bsgenome-mmusculus-ucsc-mm10@1.4.3 r-bsgenome@1.80.0
Channel: guix-bioc
Location: guix-bioc/packages/b.scm (guix-bioc packages b)
Home page: https://bioconductor.org/packages/BSgenome.Mmusculus.UCSC.mm10.masked
Licenses: Artistic License 2.0
Build system: r
Synopsis: Full masked genome sequences for Mus musculus (UCSC genome mm10, based on GRCm38.p6)
Description:

Full genome sequences for Mus musculus (Mouse) as provided by UCSC (genome mm10, based on GRCm38.p6) and stored in Biostrings objects. The sequences are the same as in BSgenome.Mmusculus.UCSC.mm10, except that each of them has the 2 following masks on top: (1) the mask of assembly gaps (AGAPS mask), and (2) the mask of intra-contig ambiguities (AMB mask).

r-descriptiverepresentationcalculator 1.1.1
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://github.com/cjerzak/DescriptiveRepresentationCalculator-software/
Licenses: GPL 3
Build system: r
Synopsis: Characterizing Observed and Expected Representation
Description:

This package provides a system for analyzing descriptive representation, especially for comparing the composition of a political body to the population it represents. Users can compute the expected degree of representation for a body under a random sampling model, the expected degree of representation variability, as well as representation scores from observed political bodies. The package is based on Gerring, Jerzak, and Oncel (2024) <doi:10.1017/S0003055423000680>.

r-bsgenome-drerio-ucsc-danrer6-masked 1.3.99
Propagated dependencies: r-bsgenome-drerio-ucsc-danrer6@1.4.0 r-bsgenome@1.80.0
Channel: guix-bioc
Location: guix-bioc/packages/b.scm (guix-bioc packages b)
Home page: https://bioconductor.org/packages/BSgenome.Drerio.UCSC.danRer6.masked
Licenses: Artistic License 2.0
Build system: r
Synopsis: Full masked genome sequences for Danio rerio (UCSC version danRer6)
Description:

Full genome sequences for Danio rerio (Zebrafish) as provided by UCSC (danRer6, Dec. 2008) and stored in Biostrings objects. The sequences are the same as in BSgenome.Drerio.UCSC.danRer6, except that each of them has the 4 following masks on top: (1) the mask of assembly gaps (AGAPS mask), (2) the mask of intra-contig ambiguities (AMB mask), (3) the mask of repeats from RepeatMasker (RM mask), and (4) the mask of repeats from Tandem Repeats Finder (TRF mask). Only the AGAPS and AMB masks are "active" by default.

r-bsgenome-drerio-ucsc-danrer5-masked 1.3.99
Propagated dependencies: r-bsgenome-drerio-ucsc-danrer5@1.4.0 r-bsgenome@1.80.0
Channel: guix-bioc
Location: guix-bioc/packages/b.scm (guix-bioc packages b)
Home page: https://bioconductor.org/packages/BSgenome.Drerio.UCSC.danRer5.masked
Licenses: Artistic License 2.0
Build system: r
Synopsis: Full masked genome sequences for Danio rerio (UCSC version danRer5)
Description:

Full genome sequences for Danio rerio (Zebrafish) as provided by UCSC (danRer5, Jul. 2007) and stored in Biostrings objects. The sequences are the same as in BSgenome.Drerio.UCSC.danRer5, except that each of them has the 4 following masks on top: (1) the mask of assembly gaps (AGAPS mask), (2) the mask of intra-contig ambiguities (AMB mask), (3) the mask of repeats from RepeatMasker (RM mask), and (4) the mask of repeats from Tandem Repeats Finder (TRF mask). Only the AGAPS and AMB masks are "active" by default.

r-bsgenome-drerio-ucsc-danrer7-masked 1.3.99
Propagated dependencies: r-bsgenome-drerio-ucsc-danrer7@1.4.0 r-bsgenome@1.80.0
Channel: guix-bioc
Location: guix-bioc/packages/b.scm (guix-bioc packages b)
Home page: https://bioconductor.org/packages/BSgenome.Drerio.UCSC.danRer7.masked
Licenses: Artistic License 2.0
Build system: r
Synopsis: Full masked genome sequences for Danio rerio (UCSC version danRer7)
Description:

Full genome sequences for Danio rerio (Zebrafish) as provided by UCSC (danRer7, Jul. 2010) and stored in Biostrings objects. The sequences are the same as in BSgenome.Drerio.UCSC.danRer7, except that each of them has the 4 following masks on top: (1) the mask of assembly gaps (AGAPS mask), (2) the mask of intra-contig ambiguities (AMB mask), (3) the mask of repeats from RepeatMasker (RM mask), and (4) the mask of repeats from Tandem Repeats Finder (TRF mask). Only the AGAPS and AMB masks are "active" by default.

r-compositereliabilityinnesteddesigns 1.0.4
Propagated dependencies: r-tidyr@1.3.2 r-rsolnp@2.0.1 r-reshape2@1.4.5 r-psych@2.6.5 r-plyr@1.8.9 r-magrittr@2.0.5 r-lme4@2.0-1 r-ggplot2@4.0.3 r-dplyr@1.2.1
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://github.com/jmoonen/compositeReliabilityInNestedDesigns
Licenses: GPL 3+
Build system: r
Synopsis: Optimizing the Composite Reliability in Multivariate Nested Designs
Description:

The reliability of assessment tools is a crucial aspect of monitoring student performance in various educational settings. It ensures that the assessment outcomes accurately reflect a student's true level of performance. However, when assessments are combined, determining composite reliability can be challenging, especially for naturalistic and unbalanced datasets in nested design as is often the case for Workplace-Based Assessments. This package is designed to estimate composite reliability in nested designs using multivariate generalizability theory and enhance the analysis of assessment data. The package allows for the inclusion of weight per assessment type and produces extensive G- and D-study results with graphical interpretations, and options to find the set of weights that maximizes the composite reliability or minimizes the standard error of measurement (SEM).

r-txdb-rnorvegicus-ucsc-rn6-ncbirefseq 3.12.0
Propagated dependencies: r-genomicfeatures@1.64.0 r-annotationdbi@1.74.0
Channel: guix-bioc
Location: guix-bioc/packages/t.scm (guix-bioc packages t)
Home page: https://bioconductor.org/packages/TxDb.Rnorvegicus.UCSC.rn6.ncbiRefSeq
Licenses: Artistic License 2.0
Build system: r
Synopsis: Annotation package for TxDb object(s)
Description:

Exposes an annotation databases generated from UCSC by exposing these as TxDb objects.

emacs-recentf-remove-sudo-tramp-prefix 20220621.749
Channel: emacs
Location: emacs/packages/melpa.scm (emacs packages melpa)
Home page: https://github.com/ncaq/recentf-remove-sudo-tramp-prefix
Licenses:
Build system: melpa
Synopsis: Normalise recentf history
Description:

Documentation at https://melpa.org/#/recentf-remove-sudo-tramp-prefix

go-codeberg-org-readeck-go-readability 2.1.1
Propagated dependencies: go-golang-org-x-net@0.53.0 go-github-com-stretchr-testify@1.11.1 go-github-com-spf13-pflag@1.0.10 go-github-com-sergi-go-diff@1.3.1 go-github-com-mattn-go-isatty@0.0.22 go-github-com-lmittmann-tint@1.1.2 go-github-com-go-shiori-dom@0.0.0-20230515143342-73569d674e1c go-github-com-araddon-dateparse@0.0.0-20210429162001-6b43995a97de
Channel: cast
Location: cast/packages/rssguard.scm (cast packages rssguard)
Home page: https://codeberg.org/readeck/go-readability
Licenses: Expat
Build system: go
Synopsis: Go-Readability
Description:

Package readability is a Go package that find the main readable content from a HTML page. It works by removing clutter like buttons, ads, background images, script, etc.

r-illuminahumanmethylation450kmanifest 0.4.0
Propagated dependencies: r-minfi@1.58.0
Channel: guix
Location: gnu/packages/bioconductor.scm (gnu packages bioconductor)
Home page: https://bioconductor.org/packages/IlluminaHumanMethylation450kmanifest
Licenses: Artistic License 2.0
Build system: r
Synopsis: Annotation for Illumina's 450k methylation arrays
Description:

This package provides a manifest for Illumina's 450k array data.

r-illuminahumanmethylationepicmanifest 0.3.0
Propagated dependencies: r-minfi@1.58.0
Channel: guix
Location: gnu/packages/bioconductor.scm (gnu packages bioconductor)
Home page: https://bioconductor.org/packages/IlluminaHumanMethylationEPICmanifest/
Licenses: Artistic License 2.0
Build system: r
Synopsis: Manifest for Illumina's EPIC methylation arrays
Description:

This is a manifest package for Illumina's EPIC methylation arrays.

emacs-universal-sidecar-elfeed-related 20260314.1744
Propagated dependencies: emacs-universal-sidecar@20260314.1744 emacs-bibtex-completion@20241116.726 emacs-elfeed@20261010.1010
Channel: emacs
Location: emacs/packages/melpa.scm (emacs packages melpa)
Home page: https://git.sr.ht/~swflint/emacs-universal-sidecar
Licenses:
Build system: melpa
Synopsis: Related Papers Sidecar Section for Elfeed
Description:

Documentation at https://melpa.org/#/universal-sidecar-elfeed-related

Total packages: 33096