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r-tqk 0.1.8
Propagated dependencies: r-tibble@3.2.1 r-magrittr@2.0.3 r-jsonlite@2.0.0 r-httr@1.4.7 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/mrchypark/tqk
Licenses: Expat
Synopsis: Get Financial Data in Korea
Description:

Enables the acquisition of Korean financial market data, designed to integrate seamlessly with the tidyquant package.

r-tth 4.16-0
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=tth
Licenses: GPL 2
Synopsis: TeX-to-HTML/MathML Translators TtH/TtM
Description:

C source code and R wrappers for the tth/ttm TeX-to-HTML/MathML translators.

r-vam 1.1.0
Propagated dependencies: r-matrix@1.7-3 r-mass@7.3-65
Channel: guix-cran
Location: guix-cran/packages/v.scm (guix-cran packages v)
Home page: https://cran.r-project.org/package=VAM
Licenses: GPL 2+
Synopsis: Variance-Adjusted Mahalanobis
Description:

This package contains logic for cell-specific gene set scoring of single cell RNA sequencing data.

r-wfg 0.1
Propagated dependencies: r-igraph@2.1.4
Channel: guix-cran
Location: guix-cran/packages/w.scm (guix-cran packages w)
Home page: https://cran.r-project.org/package=wfg
Licenses: GPL 2+
Synopsis: Weighted Fast Greedy Algorithm
Description:

Implementation of Weighted Fast Greedy algorithm for community detection in networks with mixed types of attributes.

r-woe 0.2
Channel: guix-cran
Location: guix-cran/packages/w.scm (guix-cran packages w)
Home page: https://cran.r-project.org/package=woe
Licenses: GPL 2
Synopsis: Computes Weight of Evidence and Information Values
Description:

Shows the relationship between an independent and dependent variable through Weight of Evidence and Information Value.

r-cqn 1.54.0
Propagated dependencies: r-quantreg@6.1 r-nor1mix@1.3-3 r-mclust@6.1.1
Channel: guix-bioc
Location: guix-bioc/packages/c.scm (guix-bioc packages c)
Home page: https://bioconductor.org/packages/cqn
Licenses: Artistic License 2.0
Synopsis: Conditional quantile normalization
Description:

This package provides a normalization tool for RNA-Seq data, implementing the conditional quantile normalization method.

r-sc3 1.36.0
Propagated dependencies: r-writexls@6.7.0 r-summarizedexperiment@1.38.1 r-singlecellexperiment@1.30.1 r-shiny@1.10.0 r-s4vectors@0.46.0 r-rrcov@1.7-7 r-rocr@1.0-11 r-robustbase@0.99-4-1 r-rcpparmadillo@14.4.2-1 r-rcpp@1.0.14 r-pheatmap@1.0.12 r-ggplot2@3.5.2 r-foreach@1.5.2 r-e1071@1.7-16 r-dorng@1.8.6.2 r-doparallel@1.0.17 r-cluster@2.1.8.1 r-biocgenerics@0.54.0
Channel: guix-bioc
Location: guix-bioc/packages/s.scm (guix-bioc packages s)
Home page: https://github.com/hemberg-lab/SC3
Licenses: GPL 3
Synopsis: Single-Cell Consensus Clustering
Description:

This package provides a tool for unsupervised clustering and analysis of single cell RNA-Seq data.

r-car 3.1-3
Propagated dependencies: r-abind@1.4-8 r-cardata@3.0-5 r-formula@1.2-5 r-lme4@1.1-37 r-mass@7.3-65 r-mgcv@1.9-3 r-nlme@3.1-168 r-nnet@7.3-20 r-pbkrtest@0.5.4 r-quantreg@6.1 r-scales@1.4.0
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://r-forge.r-project.org/projects/car/
Licenses: GPL 2+
Synopsis: Companion to applied regression
Description:

This package provides functions and datasets from book Companion to Applied regression, Second Edition, Sage, 2011.

rogue 5.4.4
Dependencies: ncurses@6.2.20210619
Channel: guix
Location: gnu/packages/games.scm (gnu packages games)
Home page: https://github.com/Davidslv/rogue
Licenses: Modified BSD
Synopsis: Original rogue game
Description:

This package provides ``Rogue: Exploring the Dungeons of Doom'', the original rogue game found on 4.2BSD.

r-rcm 1.24.0
Propagated dependencies: r-vgam@1.1-13 r-tseries@0.10-58 r-tensor@1.5 r-reshape2@1.4.4 r-rcolorbrewer@1.1-3 r-phyloseq@1.52.0 r-nleqslv@3.3.5 r-mass@7.3-65 r-ggplot2@3.5.2 r-edger@4.6.2 r-dbi@1.2.3 r-alabama@2023.1.0
Channel: guix-bioc
Location: guix-bioc/packages/r.scm (guix-bioc packages r)
Home page: https://bioconductor.org/packages/release/bioc/vignettes/RCM/inst/doc/RCMvignette.html/
Licenses: GPL 2
Synopsis: Fit row-column association models with the negative binomial distribution for the microbiome
Description:

Combine ideas of log-linear analysis of contingency table, flexible response function estimation and empirical Bayes dispersion estimation for explorative visualization of microbiome datasets. The package includes unconstrained as well as constrained analysis. In addition, diagnostic plot to detect lack of fit are available.

r-rwc 1.12
Propagated dependencies: r-raster@3.6-32 r-mvtnorm@1.3-3 r-matrix@1.7-3 r-mass@7.3-65
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=rwc
Licenses: GPL 2
Synopsis: Random Walk Covariance Models
Description:

Code to facilitate simulation and inference when connectivity is defined by underlying random walks. Methods for spatially-correlated pairwise distance data are especially considered. This provides core code to conduct analyses similar to that in Hanks and Hooten (2013) <doi:10.1080/01621459.2012.724647>.

r-bfs 0.5.13
Propagated dependencies: r-zip@2.3.3 r-xml2@1.3.8 r-tibble@3.2.1 r-sf@1.0-21 r-rvest@1.0.4 r-rstac@1.0.1 r-pxweb@0.17.0 r-purrr@1.0.4 r-magrittr@2.0.3 r-lifecycle@1.0.4 r-janitor@2.2.1 r-httr2@1.1.2 r-fs@1.6.6 r-dplyr@1.1.4 r-curl@6.2.2
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://felixluginbuhl.com/BFS/
Licenses: GPL 3+
Synopsis: Get Data from the Swiss Federal Statistical Office
Description:

Search and download data from the Swiss Federal Statistical Office (BFS) APIs <https://www.bfs.admin.ch/>.

r-fuj 0.2.2
Channel: guix-cran
Location: guix-cran/packages/f.scm (guix-cran packages f)
Home page: https://jmbarbone.github.io/fuj/
Licenses: Expat
Synopsis: Functions and Utilities for Jordan
Description:

This package provides core functions and utilities for packages and other code developed by Jordan Mark Barbone.

r-fmp 1.4
Channel: guix-cran
Location: guix-cran/packages/f.scm (guix-cran packages f)
Home page: https://cran.r-project.org/package=FMP
Licenses: GPL 2+
Synopsis: Filtered Monotonic Polynomial IRT Models
Description:

Estimates Filtered Monotonic Polynomial IRT Models as described by Liang and Browne (2015) <DOI:10.3102/1076998614556816>.

r-ibr 2.0-4
Propagated dependencies: r-mgcv@1.9-3
Channel: guix-cran
Location: guix-cran/packages/i.scm (guix-cran packages i)
Home page: https://cran.r-project.org/package=ibr
Licenses: GPL 2+
Synopsis: Iterative Bias Reduction
Description:

Multivariate smoothing using iterative bias reduction with kernel, thin plate splines, Duchon splines or low rank splines.

r-ifs 0.1.10
Channel: guix-cran
Location: guix-cran/packages/i.scm (guix-cran packages i)
Home page: https://cran.r-project.org/package=ifs
Licenses: GPL 2+
Synopsis: Iterated Function Systems
Description:

Iterated Function Systems Estimator as in Iacus and La Torre (2005) <doi:10.1155/JAMDS.2005.33>.

r-mcm 0.1.7
Propagated dependencies: r-survey@4.4-2 r-stringr@1.5.1 r-parameters@0.25.0 r-lme4@1.1-37 r-gee@4.13-29 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://cran.r-project.org/package=MCM
Licenses: GPL 2
Synopsis: Estimating and Testing Intergenerational Social Mobility Effect
Description:

Estimate and test inter-generational social mobility effect on an outcome with cross-sectional or longitudinal data.

r-ggm 2.5.1
Propagated dependencies: r-biocmanager@1.30.25 r-graph@1.86.0 r-igraph@2.1.4
Channel: guix
Location: gnu/packages/bioconductor.scm (gnu packages bioconductor)
Home page: https://cran.r-project.org/package=ggm
Licenses: GPL 2+
Synopsis: Functions for graphical Markov models
Description:

This package provides functions and datasets for maximum likelihood fitting of some classes of graphical Markov models.

r-lim 1.4.7.2
Propagated dependencies: r-diagram@1.6.5 r-limsolve@1.5.7.2
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/LIM/
Licenses: GPL 2+
Synopsis: Linear inverse model examples and solution methods
Description:

This package provides functions that read and solve linear inverse problems (food web problems, linear programming problems).

rhino 1.7.7.2
Dependencies: bash-minimal@5.1.16
Channel: guix
Location: gnu/packages/javascript.scm (gnu packages javascript)
Home page: https://mozilla.github.io/rhino
Licenses: MPL 2.0
Synopsis: Javascript implemented in Java
Description:

Rhino implements ECMAScript, also known as JavaScript, in Java as specified in the fifth edition of ECMA-262.

r-ri2 0.4.0
Propagated dependencies: r-randomizr@1.0.0 r-pbapply@1.7-2 r-ggplot2@3.5.2 r-generics@0.1.4 r-estimatr@1.0.6
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=ri2
Licenses: Expat
Synopsis: Randomization Inference for Randomized Experiments
Description:

Randomization inference procedures for simple and complex randomized designs, including multi-armed trials, as described in Gerber and Green (2012, ISBN: 978-0393979954). Users formally describe their randomization procedure and test statistic. The randomization distribution of the test statistic under some null hypothesis is efficiently simulated.

r-rsc 2.0.4
Propagated dependencies: r-matrix@1.7-3 r-foreach@1.5.2 r-doparallel@1.0.17
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=RSC
Licenses: GPL 2+
Synopsis: Robust and Sparse Correlation Matrix
Description:

This package performs robust and sparse correlation matrix estimation. Robustness is achieved based on a simple robust pairwise correlation estimator, while sparsity is obtained based on thresholding. The optimal thresholding is tuned via cross-validation. See Serra, Coretto, Fratello and Tagliaferri (2018) <doi:10.1093/bioinformatics/btx642>.

r-rva 0.0.5
Propagated dependencies: r-xml@3.99-0.18 r-tidyr@1.3.1 r-tibble@3.2.1 r-stringr@1.5.1 r-rlang@1.1.6 r-purrr@1.0.4 r-plotly@4.10.4 r-org-hs-eg-db@3.21.0 r-msigdbr@24.1.0 r-haven@2.5.4 r-gsvadata@1.44.0 r-gseabase@1.70.0 r-gridextra@2.3 r-ggpubr@0.6.0 r-ggplot2@3.5.2 r-edger@4.6.2 r-dplyr@1.1.4 r-data-table@1.17.2 r-complexheatmap@2.24.0 r-clusterprofiler@4.16.0 r-circlize@0.4.16
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/THERMOSTATS/RVA
Licenses: GPL 2
Synopsis: RNAseq Visualization Automation
Description:

Automate downstream visualization & pathway analysis in RNAseq analysis. RVA is a collection of functions that efficiently visualize RNAseq differential expression analysis result from summary statistics tables. It also utilize the Fisher's exact test to evaluate gene set or pathway enrichment in a convenient and efficient manner.

r-bda 18.3.2
Propagated dependencies: r-boot@1.3-31
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://cran.r-project.org/package=bda
Licenses: FSDG-compatible
Synopsis: Binned Data Analysis
Description:

Algorithms developed for binned data analysis, gene expression data analysis and measurement error models for ordinal data analysis.

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