This package provides an implementation of an algorithm for recalibrating the base quality scores for aligned sequencing data in BAM format.
The R4RNA package aims to be a general framework for the analysis of RNA secondary structure and comparative analysis in R.
Jade is a high performance template engine heavily influenced by Haml and implemented with JavaScript for node and browsers.
This package provides a strong type system for R which supports symbol declaration and assignment with type checking and condition checking.
This package allows communication with the Extensible Neuroimaging Archive Toolkit. Rxnat uses the XNAT REST API to perform data queries and download images.
Small RNA sequencing viewer.
This package provides an R interface to libsbml for SBML parsing, validating output, provides an S4 SBML DOM, converts SBML to R graph objects.
Implementation of some functions to create quizzes in the GIFT format. This format is used by several Virtual Learning Environments such as Moodle.
Reservoir Systems Standard Operation Policy. A system for simulation of supply reservoirs. It proposes functionalities for plotting and evaluation of supply reservoirs systems.
This package provides a toolbox for working with base types, core R features like the condition system, and core Tidyverse features like tidy evaluation.
Build regular expressions piece by piece using human readable code. This package is designed for interactive use. For package development, use the rebus.* dependencies.
Client interface for the registry API.
Reads and plots phylogenetic placements.
Palettes based on video games.
Some handy function in R.
Fundamental formulas for Radar, for attenuation, range, velocity, effectiveness, power, scatter, doppler, geometry, radar equations, etc. Based on Nick Guy's Python package PyRadarMet.
TSON, short for Typed JSON, is a binary-encoded serialization of JSON like document that support JavaScript typed data (https://github.com/tercen/TSON).
Extract text or metadata from over a thousand file types, using Apache Tika <https://tika.apache.org/>. Get either plain text or structured XHTML content.
After defining an R6 class, R62S3 is used to automatically generate optional S3/S4 generics and methods for dispatch. Also allows piping for R6 objects.
Provide simple mechanism to repeatedly evaluate an expression until either it succeeds or timeout exceeded. It is useful in situations that random failures could happen.
R package for performing thermal proximity co-aggregation analysis with thermal proteome profiling datasets to analyse protein complex assembly and (differential) protein-protein interactions across conditions.
This package provides tools for comprehensive gene set enrichment and extraction of multi-resource high confidence subnetworks. RITAN facilitates bioinformatic tasks for enabling network biology research.
Add-in to the RJDemetra package on seasonal adjustments. It allows to produce dashboards to summarise models and quickly check the quality of the seasonal adjustment.
This package provides helper functions for authenticating and retrieving data from your ODK-X Sync Endpoint'. This is an early release intended for testing and feedback.