The IGVF Catalog provides data on the impact of genomic variants on function. The `rigvf` package provides an interface to the IGVF Catalog, allowing easy integration with Bioconductor resources.
This package provides functions to simulate and analyze data for a regression model with an interval censored covariate, as described in Morrison et al. (2021) <doi:10.1111/biom.13472>.
Connector to the REST API of a Rock R server, to perform operations on a remote R server session, or administration tasks. See Rock documentation at <https://rockdoc.obiba.org/>.
Estimates of standard errors of popular risk and performance measures for asset or portfolio returns using methods as described in Chen and Martin (2021) <doi:10.21314/JOR.2020.446>.
Simplified scenario testing and sensitivity analysis, redesigned to use packages future and furrr'. Provides functions for generating function argument sets using one-factor-at-a-time (OFAT) and (sampled) permutations.
The RJDBC package is an implementation of R's DBI interface using JDBC as a back-end. This allows R to connect to any DBMS that has a JDBC driver.
Bayesian geostatistical modeling of Gaussian processes using a reparameterized and marginalized posterior sampling (RAMPS) algorithm designed to lower autocorrelation in MCMC samples. Package performance is tuned for large spatial datasets.
The ribor package provides an R Interface for .ribo files. It provides functionality to read the .ribo file, which is of HDF5 format, and performs common analyses on its contents.
This package provides an R interface to the GNU Linear Programming Kit, software for solving large-scale linear programming (LP), mixed integer linear programming (MILP) and other related problems.
Fit right censored Multiple Ordinal Tobit (MOT) model.
Log-analytic methods intended for testing multiplicative effects.
Parametric modeling of M-quantile regression coefficient functions.
This package provides a database-independent JDBC interface.
Weighted Piecewise Kernel Density Estimation for large data.
This package provides functions for performing phylogenetic comparative analyses.
This package provides various methods for MRI tissue classification.
RT provides a framework for writing regression test suites.
Within this package the XML-RPC API to NEOS <https://neos-server.org/neos/> is implemented. This enables the user to pass optimization problems to NEOS and retrieve results within R.
This package creates JavaScript charts with the nvd3 library. So far only the multibar chart, the horizontal multibar chart, the line chart and the line chart with focus are available.
Allows developers to work with many R folders inside a package. It offers functionalities to transfer R scripts (saved outside the R folder) into the R folder while making additional checks.
Optimization of any Black-Box/Non-Convex Function on Hyper-Rectangular Parameter Space. It uses a Variation of Pattern Search Technique. Described in the paper : Das (2016) <arXiv:1604.08616> .
Set of classes and methods to read data and metadata documents exchanged through the Statistical Data and Metadata Exchange (SDMX) framework, currently focusing on the SDMX XML standard format (SDMX-ML).
This package provides tools for creating data validation pipelines and tidy reports. This package offers a framework for exploring and validating data frame like objects using dplyr grammar of data manipulation.
Bundles the datasets and functions featured in Philip H. Pollock and Barry C. Edwards<https://edge.sagepub.com/pollock>, "An R Companion to Political Analysis, 3rd Edition," Thousand Oaks, CA: Sage Publications.