This package provides a simple pytest plugin to run tests concurrently. The main goal of pytest-run-parallel is to discover thread-safety issues that could exist when using C libraries, this is of vital importance after PEP703, which provides a path for a CPython implementation without depending on the Global Interpreter Lock (GIL), thus allowing for proper parallelism in programs that make use of the CPython interpreter.
pytest-random-order is a Pytest plugin that randomizes the order of tests. This can be useful to detect a test that passes just because it happens to run after an unrelated test that leaves the system in a favourable state. The plugin allows user to control the level of randomness they want to introduce and to disable reordering on subsets of tests. Tests can be rerun in a specific order by passing a seed value reported in a previous test run.
This package implements a functionalit of signing and verification tools for Conda. Based on The Update Framework (TUF), conda-content-trust is intended to ensure that when users in the conda ecosystem obtain a package or data about that package, they can know whether or not it is trustworthy (e.g. originally comes from a reliable source and has not been tampered with). A basic library and basic CLI are included to provide signing, verification, and trust delegation functionality.
TerminalTextEffects (TTE) is a terminal visual effects engine. It can be installed as a system application to produce effects in your terminal, or as a Python library to enable effects within your Python scripts/applications. It also includes a growing library of built-in effects which showcase the engine's features, including complex character movement via Paths, Waypoints, and motion easing, with support for quadratic/cubic bezier curves, complex animations via Scenes with symbol/color changes, layers, easing, and Path synced progression, and variable stop/step color gradient generation. Runs inline, preserving terminal state and workflow.
PyEGA3 is a tool for viewing and downloading files from authorized EGA datasets. It uses the EGA data API and has several key features:
Files are transferred over secure https connections and received unencrypted, so no need for decryption after download.
Downloads resume from where they left off in the event that the connection is interrupted.
Supports file segmenting and parallelized download of segments, improving overall performance.
After download completes, file integrity is verified using checksums.
Implements the GA4GH-compliant htsget protocol for download of genomic ranges for data files with accompanying index files.
This package provides a Python library intended for use in automated tests. One difficulty when testing software is that the code under test might need to read or write to files in the local file system. If the file system is not set up in just the right way, it might cause a spurious error during the test. The pyfakefs library provides a solution to problems like this by mocking file system interactions. In other words, it arranges for the code under test to interact with a fake file system instead of the real file system. The code under test requires no modification to work with pyfakefs.
The goal of pathlib2 is to provide a backport of standard pathlib module which tracks the standard library module, so all the newest features of the standard pathlib can be used also on older Python versions.
Pathlib offers a set of classes to handle file system paths. It offers the following advantages over using string objects:
No more cumbersome use of os and os.path functions. Everything can be done easily through operators, attribute accesses, and method calls.
Embodies the semantics of different path types. For example, comparing Windows paths ignores casing.
Well-defined semantics, eliminating any inconsistencies or ambiguities (forward vs. backward slashes, etc.).
SpikeInterface is a Python framework designed to unify preexisting spike sorting technologies into a single code base.
It can:
read/write many extracellular file formats.
pre-process extracellular recordings.
run many popular, semi-automatic spike sorters (kilosort1-4, mountainsort4-5, spykingcircus, tridesclous, ironclust, herdingspikes, yass, waveclus)
run sorters developed in house (lupin, spkykingcicus2, tridesclous2, simple) that compete with kilosort4
run theses polar sorters without installation using containers (Docker/Singularity).
post-process sorted datasets using th SortingAnalyzer
compare and benchmark spike sorting outputs.
compute quality metrics to validate and curate spike sorting outputs.
visualize recordings and spike sorting outputs in several ways (matplotlib, sortingview, jupyter, ephyviewer)
export a report and/or export to phy
curate your sorting with several strategies (ml-based, metrics based, manual, ...)
have powerful sorting components to build your own sorter.
have a full motion/drift correction framework.
Browser resources implementation for Zope.
Software Heritage Mercurial Loader
Tool to compute decoding quantities.
Vanilla HTML components for Dash.
Core component suite for Dash
Core component suite for Dash.
Vanilla HTML components for Dash.
This package provides sxtra types for Pydantic.
Documentation at https://melpa.org/#/python-unicode-escape
Virtualenv is a tool to create isolated Python environments.
This package contains test vectors for the cryptography package.
Pabot is a parallel executor for Robot Framework tests.
Interactive visualization method for ancestral recombination graphs.
Poetry plugin to export the dependencies to various formats.
This package provides a keyring plugin for Proton technologies.
Python language support for the CodeMirror code editor