Generating functions for both optimal and ordinary difference sequences, and the difference-based estimation functions.

Serves for rendering MS Word documents with R inline code and inserting tables and plots.

This package provides a weighted selection probability to locate rare variants associated with multiple phenotypes.

Helpers for transforming XML content into number of tables while preserving parent to child relationships.

Affymetrix Affymetrix AG Array annotation data (chip ag) assembled using data from public repositories.

This package provides a package containing an environment representing the HGU133Plus2_Hs_Hspec.cdf file.

This package provide a method for doing gene set analysis based on multiple omics data.

This package provides functions for computing and displaying sample size information for gene expression arrays.

Inference of protein activity from gene expression data, including the VIPER and msVIPER algorithms.

Rlottie is a platform independent standalone c++ library for rendering vector based animations and art in realtime.

This package provides tools for quality control, analysis and visualization of Illumina DNA methylation array data.

This package is intended to help users to efficiently analyze genomic data resulting from various experiments.

This package completes R's functional programming tools with missing features present in other programming languages.

ripMIME is a small program to extract the attached files out of a MIME-encoded email package.

Bindings for additional models for use with the parsnip package. Models include prediction rule ensembles (Friedman and Popescu, 2008) <doi:10.1214/07-AOAS148>, C5.0 rules (Quinlan, 1992 ISBN: 1558602380), and Cubist (Kuhn and Johnson, 2013) <doi:10.1007/978-1-4614-6849-3>.

Create and manipulate hypergraph objects. This early version of rhype allows for the output of matrices associated with the hypergraphs themselves. It also uses these matrices to calculate hypergraph spectra and perform spectral comparison. Functionality coming soon includes calculation of hyperpaths and hypergraph centrality measures.

This package provides functions for risk management and portfolio investment of securities with practical tools for data processing and plotting. Moreover, it contains functions which perform the COS Method, an option pricing method based on the Fourier-cosine series (Fang, F. (2008) <doi:10.1137/080718061>).

Authors working with LaTeX articles use the built-in bibliography options and BibTeX files. While this might work with LaTeX', it does not function well with Web articles. As a way out, rebib offers tools to convert and combine bibliographies from both sources.

rfaRm provides a client interface to the Rfam database of RNA families. Data that can be retrieved include RNA families, secondary structure images, covariance models, sequences within each family, alignments leading to the identification of a family and secondary structures in the dot-bracket format.

Included here are babel routines for identifying unusual ribosome protected fragment counts given mRNA counts.

Regression for a discrete response, where the conditional distribution is modelled via a discrete Weibull distribution.

Simulation of Electric Vehicles charging sessions using Gaussian models, together with time-series power demand calculations.

This package provides tools to quickly compile taxonomic and distribution data from the Brazilian Flora 2020.

Sequential change-point tests, parameters estimation, and goodness-of-fit tests for generalized Ornstein-Uhlenbeck processes.