Using Dirichlet-Multinomial distribution to provide several functions for formal hypothesis testing, power and sample size calculations for human microbiome experiments.

This package provides a collection of Item Response Theory (IRT) and Computerized Adaptive Testing (CAT) functions that are used in psychometrics.

Nonparametric estimation and inference for natural direct and indirect effects by Chan, Imai, Yam and Zhang (2016) <arXiv:1601.03501>.

Determines networks of significant synchronization between the discrete states of nodes; see Tumminello et al <doi:10.1371/journal.pone.0017994>.

Interface for creation of slp class smoother objects for use in Generalized Additive Models (as implemented by packages gam and mgcv').

An open-access tool/framework that constitutes the core functions to analyze terrestrial water cycle data across various spatio-temporal scales.

This package combines a forecast of a time series, using the function forecast, with the dynamic plots from dygraphs.

RE is a small, portable, lightweight, and quick, regular expression library for Common Lisp. It is a non-recursive, backtracing VM.

Pattern matching, extraction, replacement and other string processing operations using Google's RE2 <https://github.com/google/re2> regular-expression engine. Consistent interface (similar to stringr'). RE2 uses finite-automata based techniques, and offers a fast and safe alternative to backtracking regular-expression engines like those used in stringr', stringi and other PCRE implementations.

Estimates the rearranged dependence measure ('RDM') of two continuous random variables for different underlying measures. Furthermore, it provides a method to estimate the (SI)-rearrangement copula using empirical checkerboard copulas. It is based on the theoretical results presented in Strothmann et al. (2022) <arXiv:2201.03329> and Strothmann (2021) <doi:10.17877/DE290R-22733>.

This package implements the Enhanced Portfolio Optimization (EPO) method as described in Pedersen, Babu and Levine (2021) <doi:10.2139/ssrn.3530390>.

Modelizations and previsions functions for Functional AutoRegressive processes using nonparametric methods: functional kernel, estimation of the covariance operator in a subspace, ...

This package provides functions to explore datasets from the Global Biodiversity Information Facility (GBIF - <https://www.gbif.org/>) using a Shiny interface.

Lexical response data is a package that can be used for processing cued-recall, free-recall, and sentence responses from memory experiments.

Sampling and evaluation methods to apply Monetary Unit Sampling (or in older literature Dollar Unit Sampling) during an audit of financial statements.

Estimates (and controls for) phylogenetic signal through phylogenetic eigenvectors regression (PVR) and phylogenetic signal-representation (PSR) curve, along with some plot utilities.

Semiparametric empirical likelihood ratio based tests of change-point with one-change or epidemic alternatives with data-based model diagnostic are contained.

This package can be used to compute associations among genes (gene-networks) or between genes and some external traits (i.e. clinical).

Data set containing two complete lists of identified functional interaction partners in Human. Data are derived from Reactome and BioGRID databases.

This package provides a suite of flexible and versatile model fitting and after-fitting functions for the analysis of dose-response data.

This package runs a minimum-hypergeometric (mHG) test as described in "Discovering Motifs in Ranked Lists of DNA Sequences" by Eran Eden.

This is a package for Bayesian model averaging and variable selection for linear models, generalized linear models and survival models (cox regression).

This package provides basic infrastructure and some algorithms for the traveling salesperson problem(TSP) (also known as the traveling salesman problem).

This package creates lots of colorful plots in a multitude of variations. Try a demo of the LSD by running demotour().