Construct language-aware lists. Make "and"-separated and "or"-separated lists that automatically conform to the user's language settings.

Bayesian purity model to estimate tumor purity using methylation array data (DNA methylation Infinium 450K array data) without reference samples.

Reads and writes CSV with selected conventions. Uses the same generic function for reading and writing to promote consistent formats.

All data sets from "Forecasting: methods and applications" by Makridakis, Wheelwright & Hyndman (Wiley, 3rd ed., 1998) <https://robjhyndman.com/forecasting/>.

Package provides the estimation of the structure and the parameters, sampling methods and structural plots of Hierarchical Archimedean Copulae (HAC).

Download ifo business survey data and more time series from ifo institute <https://www.ifo.de/en/ifo-time-series>.

Creating efficiently new column(s) in a data frame (including tibble) by applying a function one row at a time.

This package performs model fitting and significance estimation for Localised Co-Dependency between pairs of features of a numeric dataset.

This package performs Zoom-Focus Algorithm (ZFA) to optimize testing regions for rare variant association tests in exome sequencing data.

Estimates the rearranged dependence measure ('RDM') of two continuous random variables for different underlying measures. Furthermore, it provides a method to estimate the (SI)-rearrangement copula using empirical checkerboard copulas. It is based on the theoretical results presented in Strothmann et al. (2022) <arXiv:2201.03329> and Strothmann (2021) <doi:10.17877/DE290R-22733>.

Create, handle, validate, visualize and convert networks in the Cytoscape exchange (CX) format to standard data types and objects. The package also provides conversion to and from objects of iGraph and graphNEL. The CX format is also used by the NDEx platform, a online commons for biological networks, and the network visualization software Cytocape.

Solves the individual bioenergetic balance for different aquaculture sea fish (Sea Bream and Sea Bass; Brigolin et al., 2014 <doi:10.3354/aei00093>) and shellfish (Mussel and Clam; Brigolin et al., 2009 <doi:10.1016/j.ecss.2009.01.029>; Solidoro et al., 2000 <doi:10.3354/meps199137>). Allows for spatialized model runs and population simulations.

This package runs a minimum-hypergeometric (mHG) test as described in "Discovering Motifs in Ranked Lists of DNA Sequences" by Eran Eden.

This package provides a suite of flexible and versatile model fitting and after-fitting functions for the analysis of dose-response data.

This package provides basic infrastructure and some algorithms for the traveling salesperson problem(TSP) (also known as the traveling salesman problem).

This is a package for Bayesian model averaging and variable selection for linear models, generalized linear models and survival models (cox regression).

This package creates lots of colorful plots in a multitude of variations. Try a demo of the LSD by running demotour().

HVP is a quantitative batch effect metric that estimates the proportion of variance associated with batch effects in a data set.

Checks function arguments, ideally for use in R packages. Uses a simple interface and produces clean, informative error messages using cli'.

This package implements clustering techniques such as Proximus and Rock, utility functions for efficient computation of cross distances and data manipulation.

Computation of the EQL for a given family of variance functions, Saddlepoint-approximations and related auxiliary functions (e.g. Hermite polynomials).

Work with configs with a source precedence. Either create own R6 instance or work with convenient functions at a package level.

This package provides a collection of R games and other funny stuff, such as the classic Mine sweeper and sliding puzzles.

Using Dirichlet-Multinomial distribution to provide several functions for formal hypothesis testing, power and sample size calculations for human microbiome experiments.