This package provides a wrapper around a CSS library called Hover.css', intended for use in shiny applications.

This package contains a number of infix binary operators that may be useful in day to day practices.

Using embedded sdmx queries, get the data of more than 150 000 insee series from bdm macroeconomic database.

Estimates kriging models for geographical point-referenced data. Method is described in Gill (2020) <doi:10.1177/1532440020930197>.

This package provides tools for univariate and multivariate generalized linear models with model averaging and null model technique.

This package provides an Interface to Open Collaboration Services OCS (<https://www.open-collaboration-services.org/>) REST API.

Latent class analysis and latent class regression models for polytomous outcome variables. Also known as latent structure analysis.

Implementation of the structural model for variances in order to detect differentially expressed genes from gene expression data.

This package provides a traceability focused tool created to simplify the data manipulation necessary to create clinical summaries.

This package provides functions to find all matches or non-matches, orphans, and duplicate or other replicated elements.

Use various regression models for the analysis of win loss endpoints adjusting for non-binary and multivariate covariates.

Miscellaneous functions used for x-engineering (feature engineering) or for supporting in other packages maintained by Shichen Xie'.

Provide simple utilities for querying bhklab PharmacoDB, modeling API outputs, and integrating to cell and compound ontologies.

This package provides tools for differential expression analysis at both gene and isoform level using RNA-seq data

This package implements the method csSAM that computes cell-specific differential expression from measured cell proportions using SAM.

Restbed is a comprehensive and consistent programming model for building applications that require seamless and secure communication over HTTP.

This package provides various functions for classification, including k-nearest neighbour, Learning Vector Quantization and Self-Organizing Maps.

This package provides a terminal emulator with hyperlink support. It's based on VTE and aimed at power users.

Allows users to easily create references to R objects then dereference when needed or modify in place without using reference classes, environments, or active bindings as workarounds. Users can also create expression references that allow subsets of any object to be referenced or expressions containing references to multiple objects.

This is a library to access the current API of the web speed test service GTmetrix'. It provides a convenient wrapper to start tests, get reports, and access all kinds of meta data. For more information about using the API please visit <https://gtmetrix.com/api/docs/2.0/>.

Fit statistical models based on the Dawid-Skene model - Dawid and Skene (1979) <doi:10.2307/2346806> - to repeated categorical rating data. Full Bayesian inference for these models is supported through the Stan modelling language. rater also allows the user to extract and plot key parameters of these models.

This package implements the regularized exponentially tilted empirical likelihood method. Details of the methods are given in Kim, MacEachern, and Peruggia (2023) <doi:10.48550/arXiv.2312.17015>. This work was supported by the U.S. National Science Foundation under Grants No. SES-1921523 and DMS-2015552.

R interface to DSDP semidefinite programming library. The DSDP software is a free open source implementation of an interior-point method for semidefinite programming. It provides primal and dual solutions, exploits low-rank structure and sparsity in the data, and has relatively low memory requirements for an interior-point method.

This package provides a package for RNA basepair analysis, including the visualization of basepairs as arc diagrams for easy comparison and annotation of sequence and structure. Arc diagrams can additionally be projected onto multiple sequence alignments to assess basepair conservation and covariation, with numerical methods for computing statistics for each.