This package provides C-based tools for converting large scatterplot data to rasters. It speeds up plotting of data with millions of points.

BOOST-RE is a small, portable, lightweight, and quick, regular expression library for Common Lisp. It is a non-recursive, backtracking VM.

This package provides a Partial native implementation of the liquid ruby gem in C that makes it operate about three times faster.

This package extends the String class and adds a ColorizedString with methods to set text color, background color, and text effects.

An interface to the fast-access storage format for VCF data provided in SeqArray, with tools for common operations and analysis.

rtracklayer is an extensible framework for interacting with multiple genome browsers (currently UCSC built-in) and manipulating annotation tracks in various formats (currently GFF, BED, bedGraph, BED15, WIG, BigWig and 2bit built-in). The user may export/import tracks to/from the supported browsers, as well as query and modify the browser state, such as the current viewport.

This package lets you standardize country names, convert them into one of 40 different coding schemes, convert between coding schemes, and assign region descriptors.

An implementation of Relax NG schema validation written in Common Lisp, including support for compact syntax, DTD Compatibility, and the XSD type library.

Like a modern code version of the mythical beast with 100 serpent heads, Typhoeus runs HTTP requests in parallel while cleanly encapsulating handling logic.

This is a collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.

HTML widgets is a framework for creating HTML widgets that render in various contexts including the R console, R Markdown documents, and Shiny web applications.

This package provides a HTTP request library with multiple backends. It supports url.el which is shipped with Emacs and the curl command line program.

This module provides a String#unindent Ruby method to unindent strings, which can be useful to unindent multiline strings embedded in already-indented code.

Net::IMAP implements Internet Message Access Protocol (IMAP) client functionality. The protocol is described in IMAP.

Cucumber is a tool for running automated tests written in plain language. It's designed to support a Behaviour Driven Development (BDD) software development workflow.

stb-rect-pack is a small rectangle packing library useful for, e.g., packing rectangular textures into an atlas. It does not do rotation.

This package contains functionality for performing the following methods of p-value aggregation: Fisher's method, the Lancaster method (weighted Fisher's method), and Sidak correction.

This package creates a lightweight way to add markdown helpfiles to Shiny apps, using modal dialog boxes, with no need to observe each help button separately.

This library provides a Rust binding to the original implementation of webview, a tiny cross-platform library to render web-based GUIs as desktop applications.

The trimmed k-means clustering method by Cuesta-Albertos, Gordaliza and Matran (1997). This optimizes the k-means criterion under trimming a portion of the points.

This package provides a package to suggest the number of mutational signatures in a collection of somatic mutations using calculating the cross-validated perplexity score.

This package containse the JSON parsing tools shared between a number of providers in the fog gem. fog is a Ruby cloud services library.

The sourcetools package provides both an R and C++ interface for the tokenization of R code, and helpers for interacting with the tokenized representation of R code.

Read bigWig and bigBed files using libBigWig. This package provides lightweight access to the binary bigWig and bigBed formats developed by the UCSC Genome Browser group.