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r-cogps 1.54.0
Channel: guix-bioc
Location: guix-bioc/packages/c.scm (guix-bioc packages c)
Home page: https://bioconductor.org/packages/coGPS
Licenses: GPL 2
Build system: r
Synopsis: cancer outlier Gene Profile Sets
Description:

Gene Set Enrichment Analysis of P-value based statistics for outlier gene detection in dataset merged from multiple studies.

r-meshr 2.16.0
Channel: guix-bioc
Location: guix-bioc/packages/m.scm (guix-bioc packages m)
Home page: https://bioconductor.org/packages/meshr
Licenses: Artistic License 2.0
Build system: r
Synopsis: Tools for conducting enrichment analysis of MeSH
Description:

This package provides a set of annotation maps describing the entire MeSH assembled using data from MeSH.

r-mlseq 2.28.0
Channel: guix-bioc
Location: guix-bioc/packages/m.scm (guix-bioc packages m)
Home page: https://bioconductor.org/packages/MLSeq
Licenses: FSDG-compatible
Build system: r
Synopsis: Machine Learning Interface for RNA-Seq Data
Description:

This package applies several machine learning methods, including SVM, bagSVM, Random Forest and CART to RNA-Seq data.

r-medme 1.70.0
Propagated dependencies: r-mass@7.3-65 r-drc@3.0-1 r-biostrings@2.78.0
Channel: guix-bioc
Location: guix-bioc/packages/m.scm (guix-bioc packages m)
Home page: https://bioconductor.org/packages/MEDME
Licenses: GPL 2+
Build system: r
Synopsis: Modelling Experimental Data from MeDIP Enrichment
Description:

MEDME allows the prediction of absolute and relative methylation levels based on measures obtained by MeDIP-microarray experiments.

r-awinr 0.1.0
Propagated dependencies: r-jsonlite@2.0.0
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://windsor.ai/
Licenses: GPL 3
Build system: r
Synopsis: Get Data from 'Awin' via the 'Windsor.ai' API
Description:

Collect your data on digital marketing campaigns from Awin using the Windsor.ai API <https://windsor.ai/api-fields/>.

r-baseq 0.2.0
Propagated dependencies: r-ggplot2@4.0.1
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://github.com/ambuvjyn/baseq
Licenses: GPL 3
Build system: r
Synopsis: Basic Sequence Processing Tool for Biological Data
Description:

Primarily created as an easy and understanding way to do basic sequences surrounding the central dogma of molecular biology.

r-cache 0.0.3
Propagated dependencies: r-here@1.0.2 r-digest@0.6.39 r-cli@3.6.5 r-assert@1.0.1
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://github.com/OlivierBinette/cache
Licenses: Expat
Build system: r
Synopsis: Cache and Retrieve Computation Results
Description:

Easily cache and retrieve computation results. The package works seamlessly across interactive R sessions, R scripts and Rmarkdown documents.

r-cinid 1.3-1
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://cran.r-project.org/package=CINID
Licenses: GPL 2+
Build system: r
Synopsis: Curculionidae INstar IDentification
Description:

Method for identifying the instar of Curculionid larvae from the observed distribution of the headcapsule size of mature larvae.

r-doubt 0.1.0
Propagated dependencies: r-unglue@0.1.0
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://cran.r-project.org/package=doubt
Licenses: GPL 3
Build system: r
Synopsis: Enable Operators Containing the '?' Symbol
Description:

Overload utils::'? to build unary and binary operators from existing functions, piping operators of different precedence, and flexible syntaxes.

r-ezcox 1.0.4
Propagated dependencies: r-utf8@1.2.6 r-tibble@3.3.0 r-survival@3.8-3 r-scales@1.4.0 r-rlang@1.1.6 r-purrr@1.2.0 r-magrittr@2.0.4 r-ggplot2@4.0.1 r-forestmodel@0.6.2 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://github.com/ShixiangWang/ezcox
Licenses: GPL 3
Build system: r
Synopsis: Easily Process a Batch of Cox Models
Description:

This package provides a tool to operate a batch of univariate or multivariate Cox models and return tidy result.

r-fsdam 2024.7-30
Propagated dependencies: r-reticulate@1.44.1 r-kyotil@2024.11-01
Channel: guix-cran
Location: guix-cran/packages/f.scm (guix-cran packages f)
Home page: https://cran.r-project.org/package=FSDAM
Licenses: GPL 2+
Build system: r
Synopsis: Forward Stepwise Deep Autoencoder-Based Monotone NLDR
Description:

FS-DAM performs feature extraction through latent variables identification. Implementation is based on autoencoders with monotonicity and orthogonality constraints.

r-fuzzr 0.2.2
Propagated dependencies: r-purrr@1.2.0 r-progress@1.2.3 r-assertthat@0.2.1
Channel: guix-cran
Location: guix-cran/packages/f.scm (guix-cran packages f)
Home page: https://github.com/mdlincoln/fuzzr
Licenses: Expat
Build system: r
Synopsis: Fuzz-Test R Functions
Description:

Test function arguments with a wide array of inputs, and produce reports summarizing messages, warnings, errors, and returned values.

r-loder 0.2.1
Channel: guix-cran
Location: guix-cran/packages/l.scm (guix-cran packages l)
Home page: https://github.com/jonclayden/loder
Licenses: FSDG-compatible
Build system: r
Synopsis: Dependency-Free Access to PNG Image Files
Description:

Read and write access to PNG image files using the LodePNG library. The package has no external dependencies.

r-logrx 0.4.0
Propagated dependencies: r-tidyr@1.3.1 r-tibble@3.3.0 r-stringr@1.6.0 r-stringi@1.8.7 r-sessioninfo@1.2.3 r-rlang@1.1.6 r-purrr@1.2.0 r-magrittr@2.0.4 r-lifecycle@1.0.4 r-dplyr@1.1.4 r-digest@0.6.39
Channel: guix-cran
Location: guix-cran/packages/l.scm (guix-cran packages l)
Home page: https://pharmaverse.github.io/logrx/
Licenses: Expat
Build system: r
Synopsis: Logging Utility Focus on Clinical Trial Programming Workflows
Description:

This package provides a utility to facilitate the logging and review of R programs in clinical trial programming workflows.

r-lmviz 0.2.0
Propagated dependencies: r-shinyjs@2.1.0 r-shiny@1.11.1 r-scatterplot3d@0.3-44 r-rgl@1.3.31 r-mgcv@1.9-4 r-mass@7.3-65 r-lmtest@0.9-40 r-car@3.1-3
Channel: guix-cran
Location: guix-cran/packages/l.scm (guix-cran packages l)
Home page: https://cran.r-project.org/package=lmviz
Licenses: GPL 3
Build system: r
Synopsis: Package to Visualize Linear Models Features and Play with Them
Description:

This package contains a suite of shiny applications meant to explore linear model inference feature through simulation and games.

r-mombf 3.5.4
Propagated dependencies: r-survival@3.8-3 r-sparsematrixstats@1.22.0 r-rcpparmadillo@15.2.2-1 r-rcpp@1.1.0 r-pracma@2.4.6 r-ncvreg@3.16.0 r-mvtnorm@1.3-3 r-mgcv@1.9-4 r-mclust@6.1.2 r-matrix@1.7-4 r-intervals@0.15.5 r-glmnet@4.1-10 r-glasso@1.11 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://github.com/davidrusi/mombf
Licenses: GPL 2+ FSDG-compatible
Build system: r
Synopsis: Model Selection with Bayesian Methods and Information Criteria
Description:

Model selection and averaging for regression and mixtures, inclusing Bayesian model selection and information criteria (BIC, EBIC, AIC, GIC).

r-mvctm 1.2
Propagated dependencies: r-spatialnp@1.1-6 r-rfit@0.27.0 r-quantreg@6.1 r-nlme@3.1-168 r-mnm@1.0-4 r-formula@1.2-5
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://cran.r-project.org/package=mvctm
Licenses: GPL 3
Build system: r
Synopsis: Multivariate Variance Components Tests for Multilevel Data
Description:

Permutation tests for variance components for 2-level, 3-level and 4-level data with univariate or multivariate responses.

r-memss 0.9-4
Propagated dependencies: r-lme4@1.1-37
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://github.com/bbolker/MEMSS
Licenses: GPL 2+
Build system: r
Synopsis: Data Sets from Mixed-Effects Models in S
Description:

Data sets and sample analyses from Pinheiro and Bates, "Mixed-effects Models in S and S-PLUS" (Springer, 2000).

r-naive 1.2.3
Channel: guix-cran
Location: guix-cran/packages/n.scm (guix-cran packages n)
Home page: https://rpubs.com/giancarlo_vercellino/naive
Licenses: GPL 3
Build system: r
Synopsis: Empirical Extrapolation of Time Feature Patterns
Description:

An application for the empirical extrapolation of time features selecting and summarizing the most relevant patterns in time sequences.

r-nestr 0.1.2
Channel: guix-cran
Location: guix-cran/packages/n.scm (guix-cran packages n)
Home page: https://cran.r-project.org/package=nestr
Licenses: Expat
Build system: r
Synopsis: Build Nesting or Hierarchical Structures
Description:

Facilitates building a nesting or hierarchical structure as a list or data frame by using a human friendly syntax.

r-sever 0.0.7
Propagated dependencies: r-shiny@1.11.1 r-htmltools@0.5.8.1 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://sever.john-coene.com/
Licenses: Expat
Build system: r
Synopsis: Customise 'Shiny' Disconnected Screens and Error Messages
Description:

Customise Shiny disconnected screens as well as sanitize error messages to make them clearer and friendlier to the user.

r-thief 0.3
Propagated dependencies: r-hts@6.0.3 r-ggplot2@4.0.1 r-forecast@8.24.0
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: http://pkg.robjhyndman.com/thief
Licenses: GPL 3
Build system: r
Synopsis: Temporal Hierarchical Forecasting
Description:

This package provides methods and tools for generating forecasts at different temporal frequencies using a hierarchical time series approach.

r-tourr 1.2.6
Propagated dependencies: r-tibble@3.3.0 r-minerva@1.5.10 r-mgcv@1.9-4 r-mass@7.3-65 r-geozoo@0.5.1 r-energy@1.7-12 r-dplyr@1.1.4 r-cassowaryr@2.0.2 r-ash@1.0-15
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/ggobi/tourr
Licenses: Expat
Build system: r
Synopsis: Tour Methods for Multivariate Data Visualisation
Description:

This package implements geodesic interpolation and basis generation functions that allow you to create new tour methods from R.

r-rgntx 1.11.1
Propagated dependencies: r-txdb-hsapiens-ucsc-hg19-knowngene@3.22.1 r-seqinfo@1.0.0 r-s4vectors@0.48.0 r-regioner@1.42.0 r-iranges@2.44.0 r-ggplot2@4.0.1 r-genomicranges@1.62.0 r-genomicfeatures@1.62.0
Channel: guix-bioc
Location: guix-bioc/packages/r.scm (guix-bioc packages r)
Home page: https://bioconductor.org/packages/RgnTX
Licenses: Artistic License 2.0
Build system: r
Synopsis: Colocalization analysis of transcriptome elements in the presence of isoform heterogeneity and ambiguity
Description:

RgnTX allows the integration of transcriptome annotations so as to model the complex alternative splicing patterns. It supports the testing of transcriptome elements without clear isoform association, which is often the real scenario due to technical limitations. It involves functions that do permutaion test for evaluating association between features and transcriptome regions.

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