The r-abd package contains data sets and sample code for the Analysis of biological data by Michael Whitlock and Dolph Schluter.

This package provides functions to accompany A. Gelman and J. Hill, Data Analysis Using Regression and Multilevel/Hierarchical Models, Cambridge University Press, 2007.

This package provides support for linear order and unimodal order (univariate) isotonic regression and bivariate isotonic regression with linear order on both variables.

This package provides an easy to use library to setup, apply and make inference with discrete time and discrete space hidden Markov models.

This package provides means to run simulations for adaptive seamless designs with and without early outcomes for treatment selection and subpopulation type designs.

Redis is an advanced key-value cache and store. Redis supports many data structures including strings, hashes, lists, sets, sorted sets, bitmaps and hyperloglogs.

rdate connects to an RFC 868 time server over a TCP/IP network, printing the returned time and/or setting the system clock.

This package can be used to compute associations among genes (gene-networks) or between genes and some external traits (i.e. clinical).

Data set containing two complete lists of identified functional interaction partners in Human. Data are derived from Reactome and BioGRID databases.

Fast, dependency free, and vectorized base32 encoding and decoding. b32 supports the Crockford, Z, RFC 4648 lower, hex, and lower hex alphabets.

An implementation of distributional random forests as introduced in Cevid & Michel & Naf & Meinshausen & Buhlmann (2022) <doi:10.48550/arXiv.2005.14458>.

This package implements the Enhanced Portfolio Optimization (EPO) method as described in Pedersen, Babu and Levine (2021) <doi:10.2139/ssrn.3530390>.

Modelizations and previsions functions for Functional AutoRegressive processes using nonparametric methods: functional kernel, estimation of the covariance operator in a subspace, ...

This package provides functions to explore datasets from the Global Biodiversity Information Facility (GBIF - <https://www.gbif.org/>) using a Shiny interface.

This package implements an S7 class for estimates based on influence functions, with forward mode automatic differentiation defined for standard arithmetic operations.

Lexical response data is a package that can be used for processing cued-recall, free-recall, and sentence responses from memory experiments.

Sampling and evaluation methods to apply Monetary Unit Sampling (or in older literature Dollar Unit Sampling) during an audit of financial statements.

Draw nested extreme value random variables, which are the variables that appear in the latent variable formulation of the nested logit model.

Estimates (and controls for) phylogenetic signal through phylogenetic eigenvectors regression (PVR) and phylogenetic signal-representation (PSR) curve, along with some plot utilities.

Compute yield-stability index based on Bayesian methodology, which is useful for analyze multi-environment trials in plant breeding programs. References: Cotes Torres JM, Gonzalez Jaimes EP, and Cotes Torres A (2016) <https://revistas.unimilitar.edu.co/index.php/rfcb/article/view/2037> Seleccion de Genotipos con Alta Respuesta y Estabilidad Fenotipica en Pruebas Regionales: Recuperando el Concepto Biologico.

Calculate endogenous network effects in event sequences and fit relational event models (REM): Using network event sequences (where each tie between a sender and a target in a network is time-stamped), REMs can measure how networks form and evolve over time. Endogenous patterns such as popularity effects, inertia, similarities, cycles or triads can be calculated and analyzed over time.

This package provides functions for 1D and 2D Discrete Cosine Transform (DCT), Discrete Sine Transform (DST) and Discrete Hartley Transform (DHT).

Logistic Factor Analysis (LFA) is a method for a PCA analogue on Binomial data via estimation of latent structure in the natural parameter.

This package supports multiple precision arithmetic (big integers and rationals, prime number tests, matrix computation), "arithmetic without limitations" using the GNU Multiple Precision library.