Many approaches for both reading and creating XML (and HTML) documents (including DTDs), both local and accessible via HTTP or FTP. Also offers access to an XPath "interpreter".

River is a dynamic tiling Wayland compositor with flexible runtime configuration. It can run nested in an X11/Wayland session or also directly from a tty using KMS/DRM.

This package provides a R interface to the TnT javascript library (https://github.com/ tntvis) to provide interactive and flexible visualization of track-based genomic data.

This package implements a modified Newton-type algorithm (BSW algorithm) for solving the maximum likelihood estimation problem in fitting a log-binomial model under linear inequality constraints.

Estimates conditional binary quantile models developed by Lu (2020) <doi:10.1017/pan.2019.29>. The estimation procedure is implemented based on Markov chain Monte Carlo methods.

Data cloud geometry (DCG) applies random walks in finding community structures for social networks. Fushing, VanderWaal, McCowan, & Koehl (2013) (<doi:10.1371/journal.pone.0056259>).

Client library for the Earth Blox API (<https://api.earthblox.io/>). Provides authentication and endpoints for interacting with Earth Blox geospatial analytics services. Compatible with Shiny applications.

Normalizes the data from a file containing the raw values of the SNP probes of microarray data by using the FISH probes and their corresponding copy number.

This package implements numerical entropy-pooling for portfolio construction and scenario analysis as described in Meucci, Attilio (2008) and Meucci, Attilio (2010) <doi:10.2139/ssrn.1696802>.

Converts character vectors between phonetic representations. Supports IPA (International Phonetic Alphabet), X-SAMPA (Extended Speech Assessment Methods Phonetic Alphabet), and ARPABET (used by the CMU Pronouncing Dictionary).

Maximum likelihood estimation for the semiparametric joint modeling of survival and longitudinal data. Refer to the Journal of Statistical Software article: <doi:10.18637/jss.v093.i02>.

Compute bootstrap confidence intervals for the adjusted Schnabel and Schumacher-Eschmeyer multi-visit mark-recapture estimators based on Dettloff (2023) <doi:10.1016/j.fishres.2023.106756>.

Non-parametric dimensionality reduction function. Reduction with and without feature selection. Plot functions. Automated feature selections. Kosztyan et. al. (2024) <doi:10.1016/j.eswa.2023.121779>.

Data analysis for Project Risk Management via the Second Moment Method, Monte Carlo Simulation, Contingency Analysis, Sensitivity Analysis, Earned Value Management, Learning Curves, Bayesian Methods, and more.

Fitting and plotting parametric or non-parametric size-biased non-negative distributions, with optional covariates if parametric. Rowcliffe, M. et al. (2016) <doi:10.1002/rse2.17>.

River is a dynamic tiling Wayland compositor with flexible runtime configuration. It can run nested in an X11/Wayland session or also directly from a tty using KMS/DRM.

This package provides a complete interface to LibBi', a library for Bayesian inference (see <https://libbi.org> and Murray, 2015 <doi:10.18637/jss.v067.i10> for more information). This includes functions for manipulating LibBi models, for reading and writing LibBi input/output files, for converting LibBi output to provide traces for use with the coda package, and for running LibBi to conduct inference.

Downloads spatial data from spatiotemporal asset catalogs ('STAC'), computes standard spectral indices from the Awesome Spectral Indices project (Montero et al. (2023) <doi:10.1038/s41597-023-02096-0>) against raster data, and glues the outputs together into predictor bricks. Methods focus on interoperability with the broader spatial ecosystem; function arguments and outputs use classes from sf and terra', and data downloading functions support complex CQL2 queries using rstac'.

RDKit is a C++ and Python library for cheminformatics, which includes (among other things) the analysis and modification of molecules in 2D and 3D and descriptor generation for machine learning.

This package provides a suite of tools designed to build attractive command line interfaces (CLIs). It includes tools for drawing rules, boxes, trees, and Unicode symbols with ASCII alternatives.

This package provides a modern module system for R. Organize code into hierarchical, composable, reusable modules, and use it effortlessly across projects via a flexible, declarative dependency loading syntax.

This is a package containing Public Key Infrastructure functions such as verifying certificates, RSA encryption and signing, which can be used to build PKI infrastructure and perform cryptographic tasks.

The transmission between two time-series prices is assessed. It contains several functions for linear and nonlinear threshold co-integration, and furthermore, symmetric and asymmetric error correction models.

Identification and network inference of genetic loci associated with correlation changes in quantitative traits (called correlated trait loci, CTLs). Arends et al. (2016) <doi:10.21105/joss.00087>.