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r-usdoj 1.1.2
Channel: guix-cran
Location: guix-cran/packages/u.scm (guix-cran packages u)
Home page: https://github.com/ropengov/usdoj
Licenses: Expat
Build system: r
Synopsis: For Accessing U.S. Department of Justice (DOJ) Open Data
Description:

Fetch data from the <https://www.justice.gov/developer/api-documentation/api_v1> API such as press releases, blog entries, and speeches. Optional parameters allow users to specify the number of results starting from the earliest or latest entries, and whether these results contain keywords. Data is cleaned for analysis and returned in a dataframe.

r-vfunc 1.0
Channel: guix-cran
Location: guix-cran/packages/v.scm (guix-cran packages v)
Home page: https://cran.r-project.org/package=vfunc
Licenses: GPL 2
Build system: r
Synopsis: Manipulate Virtual Functions
Description:

If f <- function(x)x^2 and g <- function(x)x+1 it is a constant source of annoyance that "f+g" is not defined. Package vfunc allows you to do this, and we have (f+g)(2) returning 5. The other arithmetic operators are similarly implemented. A wide class of coding bugs is eliminated.

r-robpc 1.4
Propagated dependencies: r-trimcluster@0.2-0
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=RobPC
Licenses: GPL 2
Build system: r
Synopsis: Robust Panel Clustering Algorithm
Description:

This package performs both classical and robust panel clustering by applying Principal Component Analysis (PCA) for dimensionality reduction and clustering via standard K-Means or Trimmed K-Means. The method is designed to ensure stable and reliable clustering, even in the presence of outliers. Suitable for analyzing panel data in domains such as economic research, financial time-series, healthcare analytics, and social sciences. The package allows users to choose between classical K-Means for standard clustering and Trimmed K-Means for robust clustering, making it a flexible tool for various applications. For this package, we have benefited from the studies Rencher (2003), Wang and Lu (2021) <DOI:10.25236/AJBM.2021.031018>, Cuesta-Albertos et al. (1997) <https://www.jstor.org/stable/2242558?seq=1>.

r-rsdne 1.3.0
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=rsdNE
Licenses: GPL 2+
Build system: r
Synopsis: Response Surface Designs with Neighbour Effects (rsdNE)
Description:

Response surface designs with neighbour effects are suitable for experimental situations where it is expected that the treatment combination administered to one experimental unit may affect the response on neighboring units as well as the response on the unit to which it is applied (Dalal et al.,2025 <doi: 10.57805/revstat.v23i2.513>). Integrating these effects in the response surface model improves the experiment's precision Verma A., Jaggi S., Varghese, E.,Varghese, C.,Bhowmik, A., Datta, A. and Hemavathi M. (2021)<doi: 10.1080/03610918.2021.1890123>). This package includes sym(), asym1(), asym2(), asym3() and asym4() functions that generates response surface designs which are rotatable under a polynomial model of a given order without interaction term incorporating neighbour effects.

rottlog 0.72.2
Dependencies: coreutils@9.1 gawk@5.3.0 mailutils@3.21
Channel: guix
Location: gnu/packages/admin.scm (gnu packages admin)
Home page: https://www.gnu.org/software/rottlog/
Licenses: GPL 3+
Build system: gnu
Synopsis: Log rotation and management
Description:

GNU Rot[t]log is a program for managing log files. It is used to automatically rotate out log files when they have reached a given size or according to a given schedule. It can also be used to automatically compress and archive such logs. Rot[t]log will mail reports of its activity to the system administrator.

r-gmisc 3.0.4
Propagated dependencies: r-abind@1.4-8 r-checkmate@2.3.3 r-forestplot@3.1.7 r-glue@1.8.0 r-hmisc@5.2-4 r-htmltable@2.4.3 r-knitr@1.50 r-lattice@0.22-7 r-lubridate@1.9.4 r-magrittr@2.0.4 r-rcpp@1.1.0 r-rlang@1.1.6 r-rmarkdown@2.30 r-stringr@1.6.0 r-xml@3.99-0.20 r-yaml@2.3.10
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://gforge.se
Licenses: GPL 3+
Build system: r
Synopsis: Descriptive statistics, transition plots, and more
Description:

This package provides tools for making the descriptive "Table 1" used in medical articles, a transition plot for showing changes between categories (also known as a Sankey diagram), flow charts by extending the grid package, a method for variable selection based on the SVD, Bezier lines with arrows complementing the ones in the grid package, and more.

r-dalex 2.5.3
Propagated dependencies: r-ggplot2@4.0.1 r-ibreakdown@2.1.2 r-ingredients@2.3.0 r-kernelshap@0.9.1
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://pbiecek.github.io/DALEX/
Licenses: GPL 3+
Build system: r
Synopsis: Descriptive machine learning explanations
Description:

Machine Learning models are widely used and have various applications in classification or regression. Models created with boosting, bagging, stacking or similar techniques are often used due to their high performance, but such black-box models usually lack interpretability. The DALEX package contains various explainers that help to understand the link between input variables and model output.

r-ggdag 0.2.13
Propagated dependencies: r-dagitty@0.3-4 r-dplyr@1.1.4 r-forcats@1.0.1 r-ggplot2@4.0.1 r-ggraph@2.2.2 r-ggrepel@0.9.6 r-igraph@2.2.1 r-magrittr@2.0.4 r-pillar@1.11.1 r-purrr@1.2.0 r-rlang@1.1.6 r-stringr@1.6.0 r-tibble@3.3.0 r-tidygraph@1.3.1
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/r-causal/ggdag
Licenses: Expat
Build system: r
Synopsis: Analyze and create elegant directed acyclic graphs
Description:

Ggdag is built on top of dagitty, an R package that uses the DAGitty web tool for creating and analyzing DAGs. ggdag makes it easy to tidy and plot dagitty objects using ggplot2 and ggraph, as well as common analytic and graphical functions, such as determining adjustment sets and node relationships.

r-dorng 1.8.6.2
Propagated dependencies: r-foreach@1.5.2 r-iterators@1.0.14 r-rngtools@1.5.2
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://renozao.github.io/doRNG/
Licenses: GPL 2+
Build system: r
Synopsis: Generic reproducible parallel backend for foreach loops
Description:

This package provides functions to perform reproducible parallel foreach loops, using independent random streams as generated by L'Ecuyer's combined multiple-recursive generator. It enables to easily convert standard %dopar% loops into fully reproducible loops, independently of the number of workers, the task scheduling strategy, or the chosen parallel environment and associated foreach backend.

r-ctrap 1.28.0
Channel: guix-bioc
Location: guix-bioc/packages/c.scm (guix-bioc packages c)
Home page: https://nuno-agostinho.github.io/cTRAP
Licenses: Expat
Build system: r
Synopsis: Identification of candidate causal perturbations from differential gene expression data
Description:

Compare differential gene expression results with those from known cellular perturbations (such as gene knock-down, overexpression or small molecules) derived from the Connectivity Map. Such analyses allow not only to infer the molecular causes of the observed difference in gene expression but also to identify small molecules that could drive or revert specific transcriptomic alterations.

r-oppar 1.38.0
Propagated dependencies: r-gsva@2.4.1 r-gseabase@1.72.0 r-biobase@2.70.0
Channel: guix-bioc
Location: guix-bioc/packages/o.scm (guix-bioc packages o)
Home page: https://bioconductor.org/packages/oppar
Licenses: GPL 2
Build system: r
Synopsis: Outlier profile and pathway analysis in R
Description:

The R implementation of mCOPA package published by Wang et al. (2012). Oppar provides methods for Cancer Outlier profile Analysis. Although initially developed to detect outlier genes in cancer studies, methods presented in oppar can be used for outlier profile analysis in general. In addition, tools are provided for gene set enrichment and pathway analysis.

r-plyxp 1.4.3
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://github.com/jtlandis/plyxp
Licenses: Expat
Build system: r
Synopsis: Data masks for SummarizedExperiment enabling dplyr-like manipulation
Description:

The package provides `rlang` data masks for the SummarizedExperiment class. The enables the evaluation of unquoted expression in different contexts of the SummarizedExperiment object with optional access to other contexts. The goal for `plyxp` is for evaluation to feel like a data.frame object without ever needing to unwind to a rectangular data.frame.

r-bbmix 1.0.0
Propagated dependencies: r-stanheaders@2.32.10 r-rstan@2.32.7 r-rmutil@1.1.10 r-rcppeigen@0.3.4.0.2 r-rcpp@1.1.0 r-r-utils@2.13.0 r-data-table@1.17.8 r-bh@1.87.0-1
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://cran.r-project.org/package=bbmix
Licenses: GPL 2
Build system: r
Synopsis: Bayesian Model for Genotyping using RNA-Seq
Description:

The method models RNA-seq reads using a mixture of 3 beta-binomial distributions to generate posterior probabilities for genotyping bi-allelic single nucleotide polymorphisms. Elena Vigorito, Anne Barton, Costantino Pitzalis, Myles J. Lewis and Chris Wallace (2023) <doi:10.1093/bioinformatics/btad393> "BBmix: a Bayesian beta-binomial mixture model for accurate genotyping from RNA-sequencing.".

r-cobin 1.0.1.3
Propagated dependencies: r-spnngp@1.0.1 r-spam@2.11-1 r-rcpp@1.1.0 r-matrixstats@1.5.0 r-matrix@1.7-4 r-lme4@1.1-37 r-fields@17.1 r-coda@0.19-4.1
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://github.com/changwoo-lee/cobin
Licenses: Expat
Build system: r
Synopsis: Cobin and Micobin Regression Models for Continuous Proportional Data
Description:

This package provides functions for cobin and micobin regression models, a new family of generalized linear models for continuous proportional data (Y in the closed unit interval [0, 1]). It also includes an exact, efficient sampler for the Kolmogorov-Gamma random variable. For details, see Lee et al. (2025+) <doi:10.48550/arXiv.2504.15269>.

r-dados 0.1.0
Propagated dependencies: r-yaml@2.3.10 r-tidyr@1.3.1 r-tibble@3.3.0 r-rlang@1.1.6 r-pixarfilms@0.2.1 r-palmerpenguins@0.1.1 r-nycflights13@1.0.2 r-nasaweather@0.1.1 r-lahman@14.0-0 r-ggplot2@4.0.1 r-gapminder@1.0.1 r-fueleconomy@1.0.0 r-forcats@1.0.1 r-dplyr@1.1.4 r-babynames@1.0.1 r-ameshousing@0.0.4
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://github.com/cienciadedatos/dados
Licenses: GPL 3
Build system: r
Synopsis: Translate Datasets to Portuguese
Description:

Este pacote traduz os seguintes conjuntos de dados: airlines', airports', ames_raw', AwardsManagers', babynames', Batting', diamonds', faithful', fueleconomy', Fielding', flights', gapminder', gss_cat', iris', Managers', mpg', mtcars', atmos', penguins', People, Pitching', pixarfilms','planes', presidential', table1', table2', table3', table4a', table4b', table5', vehicles', weather', who'. English: It provides a Portuguese translated version of the datasets listed above.

r-elect 1.2
Propagated dependencies: r-nnet@7.3-20 r-msm@1.8.2
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://cran.r-project.org/package=elect
Licenses: GPL 2
Build system: r
Synopsis: Estimation of Life Expectancies Using Multi-State Models
Description:

This package provides functions to compute state-specific and marginal life expectancies. The computation is based on a fitted continuous-time multi-state model that includes an absorbing death state; see Van den Hout (2017, ISBN:9781466568402). The fitted multi-state model model should be estimated using the msm package using age as the time-scale.

r-fitur 0.6.2
Channel: guix-cran
Location: guix-cran/packages/f.scm (guix-cran packages f)
Home page: https://github.com/tomroh/fitur
Licenses: Expat
Build system: r
Synopsis: Fit Univariate Distributions
Description:

Wrapper for computing parameters for univariate distributions using MLE. It creates an object that stores d, p, q, r functions as well as parameters and statistics for diagnostics. Currently supports automated fitting from base and actuar packages. A manually fitting distribution fitting function is included to support directly specifying parameters for any distribution from ancillary packages.

r-fkbma 0.2.0
Channel: guix-cran
Location: guix-cran/packages/f.scm (guix-cran packages f)
Home page: https://cran.r-project.org/package=fkbma
Licenses: GPL 3
Build system: r
Synopsis: Free Knot-Bayesian Model Averaging
Description:

Analysis of Bayesian adaptive enrichment clinical trial using Free-Knot Bayesian Model Averaging (FK-BMA) method of Maleyeff et al. (2024) for Gaussian data. Maleyeff, L., Golchi, S., Moodie, E. E. M., & Hudson, M. (2024) "An adaptive enrichment design using Bayesian model averaging for selection and threshold-identification of predictive variables" <doi:10.1093/biomtc/ujae141>.

r-fproc 0.1.0
Dependencies: tbb@2021.6.0
Channel: guix-cran
Location: guix-cran/packages/f.scm (guix-cran packages f)
Home page: https://luismurao.github.io/fpROC/
Licenses: GPL 3
Build system: r
Synopsis: Fast Partial Receiver Operating Characteristic (ROC) Test for Ecological Niche Modeling
Description:

This package provides optimized C++ code for computing the partial Receiver Operating Characteristic (ROC) test used in niche and species distribution modeling. The implementation follows Peterson et al. (2008) <doi:10.1016/j.ecolmodel.2007.11.008>. Parallelization via OpenMP was implemented with assistance from the DeepSeek Artificial Intelligence Assistant (<https://www.deepseek.com/>).

r-famos 0.3.1
Channel: guix-cran
Location: guix-cran/packages/f.scm (guix-cran packages f)
Home page: https://cran.r-project.org/package=FAMoS
Licenses: Expat
Build system: r
Synopsis: Flexible Algorithm for Model Selection
Description:

Given a set of parameters describing model dynamics and a corresponding cost function, FAMoS performs a dynamic forward-backward model selection on a specified selection criterion. It also applies a non-local swap search method. Works on any cost function. For detailed information see Gabel et al. (2019) <doi:10.1371/journal.pcbi.1007230>.

r-genai 0.2.0
Channel: guix-cran
Location: guix-cran/packages/g.scm (guix-cran packages g)
Home page: https://genai.gd.edu.kg/
Licenses: FSDG-compatible
Build system: r
Synopsis: Generative Artificial Intelligence
Description:

Utilizing Generative Artificial Intelligence models like GPT-4 and Gemini Pro as coding and writing assistants for R users. Through these models, GenAI offers a variety of functions, encompassing text generation, code optimization, natural language processing, chat, and image interpretation. The goal is to aid R users in streamlining laborious coding and language processing tasks.

r-hashr 0.1.4
Channel: guix-cran
Location: guix-cran/packages/h.scm (guix-cran packages h)
Home page: https://github.com/markvanderloo/hashr
Licenses: GPL 3
Build system: r
Synopsis: Hash R Objects to Integers Fast
Description:

Apply an adaptation of the SuperFastHash algorithm to any R object. Hash whole R objects or, for vectors or lists, hash R objects to obtain a set of hash values that is stored in a structure equivalent to the input. See <http://www.azillionmonkeys.com/qed/hash.html> for a description of the hash algorithm.

r-isard 0.1.0
Channel: guix-cran
Location: guix-cran/packages/i.scm (guix-cran packages i)
Home page: https://cran.r-project.org/package=isard
Licenses: GPL 2
Build system: r
Synopsis: Overflow Data for Quantitative Peace Science Research
Description:

These are data and functions to support quantitative peace science research. The data are important state-year information on democracy and wealth, which require periodic updates and regular maintenance. The functions permit some exploratory and diagnostic assessment of the kinds of data in demand by the community, but do not impose many dependencies on the user.

r-keyed 0.2.0
Channel: guix-cran
Location: guix-cran/packages/k.scm (guix-cran packages k)
Home page: https://github.com/gcol33/keyed
Licenses: Expat
Build system: r
Synopsis: Explicit Key Assumptions for Flat-File Data
Description:

Helps make implicit data assumptions explicit by attaching keys to flat-file data that error when those assumptions are violated. Designed for CSV-first workflows without database infrastructure or version control. Provides key definition, assumption checks, join diagnostics, and automatic drift detection via watched data frames that snapshot before each transformation and report cell-level changes.

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