This package is an enhancement of the Text.Regex library, providing the PCRE backend to accompany regex-base, with bundled code from https://www.pcre.org.

Flat Remix GNOME is a GNOME shell theme inspired by material design. It is mostly flat using a colorful palette with some shadows, highlights, and gradients for some depth.

This is the precise pre-release version of Chez Scheme from a specific Racket release. It is used to build Racket and to bootstrap the released version of Chez Scheme.

This package adds random colors to your Org tags. In order to make colors random but consistent between same tags, colors are generated from the hash of the tag names.

This is a set of functions to use Org Roam with Consult. This packages replaces Org Roam's own completing read functions with equivalent versions utilizing Consult's internal API.

This is morrownr's fork of Realtek's rtl8812au Linux driver for USB 802.11n wireless network adapters. It provides a 88XXau kernel module that supports RTL8811AU and RTL8821AU chips.

The SummarizedExperiment container contains one or more assays, each represented by a matrix-like object of numeric or other mode. The rows typically represent genomic ranges of interest and the columns represent samples.

robot_detection is a python module to detect if a given HTTP User Agent is a web crawler. It uses the list of registered robots from http://www.robotstxt.org.

The binding_of_caller module provides the Binding#of_caller method. It allows accessing bindings from upper frames in the call stack and can evaluate code in that context.

This LaTeX reference sheet is for writing a thesis using the KOMA-Script document classes (scrartcl, scrreprt, scrbook) and all the packages needed for a thesis in natural sciences.

This module implements an interface to the GNU Readline library. It gives you input line editing facilities, input history management facilities, completion facilities, etc. Term::ReadLine::Gnu is upwards compatible with Term::ReadLine.

emacs-pip-requirements is a major mode for editing pip requirements files, with the following features:

• Syntax highlighting

• Togglable comments

• Auto completion of package names from PyPI

This Emacs package allows you to open a target page on github/gitlab (or bitbucket) by calling browse-at-remote command. It supports dired buffers and opens them in tree mode at destination.

Dirichlet-multinomial mixture models can be used to describe variability in microbial metagenomic data. This package is an interface to code originally made available by Holmes, Harris, and Quince, 2012, PLoS ONE 7(2): 1-15.

This package is a visualization and analysis toolbox for short time course data which includes dimensionality reduction, clustering, two-sample differential expression testing and gene ranking techniques. The package also provides methods for retrieving enriched pathways.

This Emacs package allows you to open a target page on github/gitlab (or bitbucket) by calling browse-at-remote command. It supports dired buffers and opens them in tree mode at destination.

Provides a simple means of reverse-proxying HTTP requests. The raw approach uses the same technique as leveraged by keter, whereas the WAI approach performs full request/response parsing via WAI and http-conduit.

This package aims to simplify working with genomic region / interval data by providing a common interface that lets you access a wide selection of file types and formats for handling genomic region data---all using the same syntax.

This package provides a minor mode for renaming buffers according to project structure. For Python buffers, that will be the whole module name. For temporary files and directories, that will be the relative path from the project root.

This package computes informative enrichment and quality measures for ChIP-seq/DNase-seq/FAIRE-seq/MNase-seq data. It can also be used to obtain robust estimates of the predominant fragment length or characteristic tag shift values in these assays.

Support for saving and opening last known pdf position in pdfview mode. Information will be saved relative to the pdf being viewed so ensure pdf-view-restore-filename is in the same directory as the viewing pdf.

This package defines an S4 class for storing data from single-cell experiments. This includes specialized methods to store and retrieve spike-in information, dimensionality reduction coordinates and size factors for each cell, along with the usual metadata for genes and libraries.

This package provides a set of predicates and assertions for checking the properties of variables, such as length, names and attributes. This is mainly for use by other package developers who want to include run-time testing features in their own packages.

Did you ever feel that C-y M-y M-y M-y ... is not a great way of trying to find that piece of text you know you killed a while back? Then browse-kill-ring.el is for you.