Chaco is a Python package for building interactive and custom 2-D plots and visualizations. Chaco facilitates writing plotting applications at all levels of complexity, from simple scripts with hard-coded data to large plotting programs with complex data interrelationships and a multitude of interactive tools. While Chaco generates attractive static plots for publication and presentation, Chaco differs from tools like Matplotlib in that it also works well for dynamic interactive data visualization and exploration.

Numba gives you the power to speed up your applications with high performance functions written directly in Python. With a few annotations, array-oriented and math-heavy Python code can be just-in-time compiled to native machine instructions, similar in performance to C, C++ and Fortran, without having to switch languages or Python interpreters.

Numba works by generating optimized machine code using the LLVM compiler infrastructure at import time, runtime, or statically (using the included pycc tool).

OSMnx is a Python library that lets you download geospatial data from OpenStreetMap and model, project, visualize, and analyze real-world street networks and any other geospatial geometries. You can download and model walkable, drivable, or bikeable urban networks with a single line of Python code then easily analyze and visualize them. You can just as easily download and work with other infrastructure types, amenities/points of interest, building footprints, elevation data, street bearings/orientations, and speed/travel time.

This package provides a history of astronomy library. Current Features:

• define standard positional numeral systems with standard arithmetics (BasedReal)

• set your own precision contexts and algorithms on arithmetical operations (PrecisionContext)

• keep track of all operations

• build or import ancient astronomical tables

• perform arithmetical and statistical operations

• support for BasedReal values

• define new calendar types

• date conversions

• collection of mathematical models used for all kinds of geocentric astronomical tables

Fiona is GDAL’s neat and nimble vector API for Python programmers. Fiona is designed to be simple and dependable. It focuses on reading and writing data in standard Python IO style and relies upon familiar Python types and protocols such as files, dictionaries, mappings, and iterators instead of classes specific to OGR. Fiona can read and write real-world data using multi-layered GIS formats and zipped virtual file systems and integrates readily with other Python GIS packages such as pyproj, Rtree, and Shapely.

Mixed sync-async queue, supposed to be used for communicating between classic synchronous (threaded) code and asynchronous (in terms of asyncio) one. Like Janus god the queue object from the library has two faces: synchronous and asynchronous interface. Synchronous is fully compatible with standard queue, asynchronous one follows asyncio queue design.

PyFAI is an azimuthal integration library that tries to be fast (as fast as C and even more using OpenCL and GPU). It is based on histogramming of the 2theta/Q positions of each (center of) pixel weighted by the intensity of each pixel, but parallel version uses a SparseMatrix-DenseVector multiplication. Neighboring output bins get also a contribution of pixels next to the border thanks to pixel splitting. Finally pyFAI provides also tools to calibrate the experimental setup using Debye-Scherrer rings of a reference compound.

A wheel is a ZIP-format archive with a specially formatted filename and the .whl extension. It is designed to contain all the files for a PEP 376 compatible install in a way that is very close to the on-disk format. Many packages will be properly installed with only the Unpack step and the unpacked archive preserves enough information to Spread (copy data and scripts to their final locations) at any later time. Wheel files can be installed with a newer pip or with wheel's own command line utility.

A wheel is a ZIP-format archive with a specially formatted filename and the .whl extension. It is designed to contain all the files for a PEP 376 compatible install in a way that is very close to the on-disk format. Many packages will be properly installed with only the Unpack step and the unpacked archive preserves enough information to Spread (copy data and scripts to their final locations) at any later time. Wheel files can be installed with a newer pip or with wheel's own command line utility.

This Python library provides functionality for communicating with a Fast IDentity Online (FIDO) device over Universal Serial Bus (USB) as well as verifying attestation and assertion signatures. It aims to support the FIDO Universal 2nd Factor (U2F) and FIDO 2.0 protocols for communicating with a USB authenticator via the Client-to-Authenticator Protocol (CTAP 1 and 2). In addition to this low-level device access, classes defined in the fido2.client and fido2.server modules implement higher level operations which are useful when interfacing with an Authenticator, or when implementing a Relying Party.

This is an extended version of the Python built-in glob module which adds:

• The ability to capture the text matched by glob patterns, and return those matches alongside the file names.

• A recursive ** globbing syntax, akin for example to the globstar option of Bash.

• The ability to replace the file system functions used, in order to glob on virtual file systems.

• Compatible with Python 2 and Python 3 (tested with 3.3).

Glob2 currently based on the glob code from Python 3.3.1.

BBKNN is a batch effect removal tool that can be directly used in the Scanpy workflow. It serves as an alternative to scanpy.api.pp.neighbors(), with both functions creating a neighbour graph for subsequent use in clustering, pseudotime and UMAP visualisation. If technical artifacts are present in the data, they will make it challenging to link corresponding cell types across different batches. BBKNN actively combats this effect by splitting your data into batches and finding a smaller number of neighbours for each cell within each of the groups. This helps create connections between analogous cells in different batches without altering the counts or PCA space.

green is a Python test runner that describes itself as:

Clean

Low redundancy in output. Result statistics for each test is vertically aligned.

Colorful

Terminal output makes good use of color when the terminal supports it.

Fast

Tests run in independent processes (one per processor by default).

Powerful

Multi-target and auto-discovery support.

Traditional

It uses the normal unittest classes and methods.

Descriptive

Multiple verbosity levels, from just dots to full docstring output.

Convenient

Bash-completion and ZSH-completion of options and test targets.

Thorough

Built-in integration with coverage.

This Python library provides encoding and decoding for the Concise Binary Object Representation (CBOR) (RFC 8949) serialization format. The specification is fully compatible with the original RFC 7049. Among its features are:

• Simple API like the json or pickle modules.

• Support many CBOR tags with stdlib objects.

• Generic tag decoding.

• Shared value references including cyclic references.

• String references compact encoding with repeated strings replaced with indices.

• Optional C module backend tested on big- and little-endian architectures.

• Extensible tagged value handling using tag_hook and object_hook on decode and default on encode.

POPPY is a Python package that simulates physical optical propagation including diffraction. It implements a flexible framework for modeling Fraunhofer and Fresnel diffraction and point spread function formation, particularly in the context of astronomical telescopes.

POPPY was developed as part of a simulation package for the James Webb Space Telescope, but is more broadly applicable to many kinds of imaging simulations. It is not, however, a substitute for high fidelity optical design software such as Zemax or Code V, but rather is intended as a lightweight alternative for cases for which diffractive rather than geometric optics is the topic of interest, and which require portability between platforms or ease of scripting.

funcy is a library that provides functional tools. Examples are:

1. merge - Merges collections of the same type

2. walk - Type-preserving map

3. select - Selects a part of a collection

4. take - Takes the first n items of a collection

5. first - Takes the first item of a collection

6. remove - Predicated-removes items of a collection

7. concat - Concatenates two collections

8. flatten - Flattens a collection with subcollections

9. distinct - Returns only distinct items

10. split - Predicated-splits a collection

11. split_at - Splits a collection at a given item

12. group_by - Groups items by group

13. pairwise - Pairs off adjacent items

14. partial - Partially-applies a function

15. curry - Curries a function

16. compose - Composes functions

17. complement - Complements a predicate

18. all_fn - "all" with predicate

funcy is a library that provides functional tools. Examples are:

1. merge - Merges collections of the same type

2. walk - Type-preserving map

3. select - Selects a part of a collection

4. take - Takes the first n items of a collection

5. first - Takes the first item of a collection

6. remove - Predicated-removes items of a collection

7. concat - Concatenates two collections

8. flatten - Flattens a collection with subcollections

9. distinct - Returns only distinct items

10. split - Predicated-splits a collection

11. split_at - Splits a collection at a given item

12. group_by - Groups items by group

13. pairwise - Pairs off adjacent items

14. partial - Partially-applies a function

15. curry - Curries a function

16. compose - Composes functions

17. complement - Complements a predicate

18. all_fn - "all" with predicate

The PyPNG module implements support for PNG images. It reads and writes PNG files with all allowable bit depths (1/2/4/8/16/24/32/48/64 bits per pixel) and colour combinations: greyscale (1/2/4/8/16 bit); RGB, RGBA, LA (greyscale with alpha) with 8/16 bits per channel; colour mapped images (1/2/4/8 bit). Adam7 interlacing is supported for reading and writing. A number of optional chunks can be specified (when writing) and understood (when reading): tRNS, bKGD, gAMA.

PyPNG is not a high level toolkit for image processing (like PIL) and does not aim at being a replacement or competitor. Its strength lies in fine-grained extensive support of PNG features. It can also read and write Netpbm PAM files, with a focus on its use as an intermediate format for implementing custom PNG processing.

This package implements a functionality to deal with RabbitMQ Streams using asyncio.

It is designed and implemented with the following qualities in mind:

• asynchronous Pythonic API with type annotations

• use of AMQP 1.0 message format to enable interoperability between RabbitMQ Stream. clients

• auto reconnection to RabbitMQ broker with lazily created connection objects

Support of many RabbitMQ Streams broker features:

• publishing single messages, or in batches, with confirmation

• subscribing to a stream at a specific point in time, from a specific offset, or using offset reference

• stream message filtering

• writing stream offset reference

• message deduplication

• integration with AMQP 1.0 ecosystem at message format level

Ginga is a toolkit designed for building viewers for scientific image data in Python, visualizing 2D pixel data in numpy arrays. It can view astronomical data such as contained in files based on the FITS (Flexible Image Transport System) file format. It is written and is maintained by software engineers at the National Astronomical Observatory of Japan (NAOJ), the Space Telescope Science Institute (STScI), and other contributing entities.

The Ginga toolkit centers around an image display object which supports zooming and panning, color and intensity mapping, a choice of several automatic cut levels algorithms and canvases for plotting scalable geometric forms. In addition to this widget, a general purpose "reference" FITS viewer is provided, based on a plugin framework. A fairly complete set of standard plugins are provided for features that we expect from a modern FITS viewer: panning and zooming windows, star catalog access, cuts, star pick/FWHM, thumbnails, etc.

HTTPX is a fully featured HTTP client for Python 3, which provides sync and async APIs, and support for both HTTP/1.1 and HTTP/2.

HTTPX builds on the well-established usability of requests, and gives you:

• A broadly requests-compatible API.

• Standard synchronous interface, but with async support if you need it.

• HTTP/1.1 and HTTP/2 support.

• Ability to make requests directly to WSGI applications or ASGI applications.

• Strict timeouts everywhere.

• Fully type annotated.

• 99% test coverage.

Plus all the standard features of requests:

• International Domains and URLs

• Keep-Alive & Connection Pooling

• Sessions with Cookie Persistence

• Browser-style SSL Verification

• Basic/Digest Authentication

• Elegant Key/Value Cookies

• Automatic Decompression

• Automatic Content Decoding

• Unicode Response Bodies

• Multipart File Uploads

• HTTP(S) Proxy Support

• Connection Timeouts

• Streaming Downloads

• .netrc Support

• Chunked Requests

APLpy is a Python module aimed at producing publication-quality plots of astronomical imaging data in FITS format. The module uses matplotlib, a powerful and interactive plotting package. It is capable of creating output files in several graphical formats, including EPS, PDF, PS, PNG, and SVG.

Main features:

• Make plots interactively or using scripts

• Show grayscale, colorscale, and 3-color RGB images of FITS files

• Generate co-aligned FITS cubes to make 3-color RGB images

• Make plots from FITS files with arbitrary WCS (e.g. position-velocity)

• Slice multi-dimensional FITS cubes

• Overlay any number of contour sets

• Overlay markers with fully customizable symbols

• Plot customizable shapes like circles, ellipses, and rectangles

• Overlay ds9 region files

• Overlay coordinate grids

• Show colorbars, scalebars, and beams

• Customize the appearance of labels and ticks

• Hide, show, and remove different contour and marker layers

• Pan, zoom, and save any view as a full publication-quality plot

• Save plots as EPS, PDF, PS, PNG, and SVG

VCR.py simplifies and speeds up tests that make HTTP requests. The first time you run code that is inside a VCR.py context manager or decorated function, VCR.py records all HTTP interactions that take place through the libraries it supports and serializes and writes them to a flat file (in yaml format by default). This flat file is called a cassette. When the relevant piece of code is executed again, VCR.py will read the serialized requests and responses from the aforementioned cassette file, and intercept any HTTP requests that it recognizes from the original test run and return the responses that corresponded to those requests. This means that the requests will not actually result in HTTP traffic, which confers several benefits including:

1. The ability to work offline

2. Completely deterministic tests

3. Increased test execution speed

If the server you are testing against ever changes its API, all you need to do is delete your existing cassette files, and run your tests again. VCR.py will detect the absence of a cassette file and once again record all HTTP interactions, which will update them to correspond to the new API.

The Adobe Font Development Kit for OpenType (AFDKO) is a set of tools for building OpenType font (OTF) files from PostScript and TrueType font data. It includes the following commands:

buildcff2vf

Assemble a CFF2 variable font from a .designspace file.

buildmasterotfs

Build master source OpenType/CFF fonts from a .designspace file and UFO master source fonts.

charplot

dtdigiplotdtfontplotdtfontsetplotdthintplotdtwaterfallplot

Aliases for the corresponding options of the proofpdf command.

checkoutlinesufo

Perform outline quality checks. It can also remove path overlaps.

comparefamily

Look in a specific directory, examine and report on all the OpenType fonts found.

type1

dtdetype1

Compile and decompile, respectively, a Type 1 font to and from a plain-text representation.

makeinstancesufo

Generate UFO font instances from a set of master UFO fonts.

makeotfexe

Read all the font data and build the final OpenType font.

makeotf

This command can be used to prepare the input files needed by makeotfexe.

mergefonts

Merge one or more fonts into a parent font.

otc2otf

Extract all OpenType fonts from the parent OpenType Collection font.

otf2otc

Build an OpenType Collection font file from two or more OpenType font files.

otf2ttf

Converts OpenType-CFF fonts to TrueType.

rotatefont

Apply a Postscript transform matrix to the source font files.

sfntdiff

Low-level comparison of two OpenType font files.

sfntedit

Support table-editing, listing, and checksumming options on sfnt-formatted files such as OpenType Format (OTF) or TrueType.

spot

Dump sfnt data from plain files or Macintosh resource files.

ttfcomponentizer

Take in a TrueType font and look for a UFO font stored in the same directory. Use the UFO's components data to compose matching TrueType glyphs.

ttfdecomponentizer

Take in a TrueType font and decompose any composite glyphs into simple glyphs.

ttxn

Make a normalized dump of the font, or of selected tables.

tx

The tx (Type eXchange) is a test harness for the CoreType libraries but also provides many useful font conversion and analysis facilities.