Predicts the sex of samples in gene expression microarray datasets.

This is a package for biclustering analysis and exploration of results.

This R package provides additional capabilities and speed for GenomicRanges operations.

This package can be used to compute local false discovery rates.

This package allows users to test characteristics of common R objects.

This package provides a collection of miscellaneous 3d plots, including isosurfaces.

This package provides a fast and scalable test runner for Ruby.

This package provides a rofi frontend for the buku bookmark manager.

An approach to age-depth modelling that uses Bayesian statistics to reconstruct accumulation histories for deposits, through combining radiocarbon and other dates with prior information on accumulation rates and their variability. See Blaauw & Christen (2011).

To detecting rare variants for binary traits using general pedigrees, the pedigree disequilibrium tests are proposed by collapsing rare haplotypes/variants with/without weights. To run the test, MERLIN is needed in Linux for haplotyping.

This package provides a set of tools to explore the behaviour statistics used for forensic DNA interpretation when close relatives are involved. The package also offers some useful tools for exploring other forensic DNA situations.

This package provides a fast implementation of Random Forests, particularly suited for high dimensional data. Ensembles of classification, regression, survival and probability prediction trees are supported. Data from genome-wide association studies can be analyzed efficiently.

This package provides a fast calculation of the Blyth-Still-Casella confidence interval. The implementation follows the StatXact 9 manual (Cytel 2010) and "Refining Binomial Confidence Intervals" by George Casella (1986) <doi:10.2307/3314658>.

This package is a collection of tools to load R packages and automatically generate BibTeX files citing them as well as load and cache plain-text and Excel formatted data stored on GitHub, and from other sources.

This package provides an implementation of the RSS syndication format for Hare.

Nonparametric estimation of additive isotonic covariate effects for proportional hazards model.

The Biodem package provides a number of functions for Biodemographic analysis.

Streamlines the fitting of common Bayesian item response models using Stan.

Generator and density function for the Generalized Inverse Gaussian (GIG) distribution.

Robust regression via gamma-divergence with L1, elastic net and ridge.

Implementation of the information matrix test for generalized partial credit models.

Adding updates (version or bullet points) to the NEWS.md file.

An implementation of the Blinder-Oaxaca decomposition for linear regression models.

Fitting the full likelihood proportional hazards model and extracting the residuals.