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r-grohmm 1.44.0
Propagated dependencies: r-genomicalignments@1.46.0 r-genomicranges@1.62.0 r-iranges@2.44.0 r-mass@7.3-65 r-rtracklayer@1.70.0 r-s4vectors@0.48.0 r-seqinfo@1.0.0
Channel: guix
Location: gnu/packages/bioconductor.scm (gnu packages bioconductor)
Home page: https://github.com/Kraus-Lab/groHMM
Licenses: GPL 3+
Build system: r
Synopsis: GRO-seq analysis pipeline
Description:

This package provides a pipeline for the analysis of GRO-seq data.

r-a4core 1.58.0
Propagated dependencies: r-biobase@2.70.0 r-glmnet@4.1-10
Channel: guix
Location: gnu/packages/bioconductor.scm (gnu packages bioconductor)
Home page: https://bioconductor.org/packages/a4Core
Licenses: GPL 3
Build system: r
Synopsis: Automated Affymetrix array analysis core package
Description:

This is the core package for the automated analysis of Affymetrix arrays.

r-presto 1.0.0-1.7636b3d
Propagated dependencies: r-data-table@1.17.8 r-dplyr@1.1.4 r-matrix@1.7-4 r-purrr@1.2.0 r-rcpp@1.1.0 r-rcpparmadillo@15.2.2-1 r-rlang@1.1.6 r-tibble@3.3.0 r-tidyr@1.3.1
Channel: guix
Location: gnu/packages/bioinformatics.scm (gnu packages bioinformatics)
Home page: https://github.com/immunogenomics/presto
Licenses: GPL 3
Build system: r
Synopsis: Fast Functions for Differential Expression using Wilcox and AUC
Description:

This package performs a fast Wilcoxon rank sum test and auROC analysis.

r-locfit 1.5-9.12
Propagated dependencies: r-lattice@0.22-7
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/locfit
Licenses: GPL 2+ GPL 3+
Build system: r
Synopsis: Local regression, likelihood and density estimation
Description:

This package provides functions used for local regression, likelihood and density estimation.

r-emdist 0.3-3
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://www.rforge.net/emd
Licenses: Expat
Build system: r
Synopsis: Earth mover's distance
Description:

This package provides tools to calculate the Earth Mover's Distance (EMD).

r-bibtex 0.5.1
Propagated dependencies: r-backports@1.5.0
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/romainfrancois/bibtex
Licenses: GPL 2+
Build system: r
Synopsis: Bibtex parser
Description:

This package provides a utility for R to parse a bibtex file.

r-argon2 0.4-0
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/wrathematics/argon2
Licenses: FreeBSD
Build system: r
Synopsis: Secure password hashing based on the argon2 algorithm
Description:

This package provides utilities for secure password hashing via the argon2 algorithm.

r-bbmisc 1.13
Propagated dependencies: r-checkmate@2.3.3 r-data-table@1.17.8
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/berndbischl/BBmisc
Licenses: Modified BSD
Build system: r
Synopsis: Miscellaneous functions for R package development
Description:

This package provides miscellaneous helper functions for the development of R packages.

r-crcl18 1.30.0
Propagated dependencies: r-biobase@2.70.0
Channel: guix-bioc
Location: guix-bioc/packages/c.scm (guix-bioc packages c)
Home page: https://bioconductor.org/packages/CRCL18
Licenses: GPL 2
Build system: r
Synopsis: CRC cell line dataset
Description:

colorectal cancer mRNA and miRNA on 18 cell lines.

r-diggit 1.42.0
Propagated dependencies: r-viper@1.44.0 r-ks@1.15.1 r-biobase@2.70.0
Channel: guix-bioc
Location: guix-bioc/packages/d.scm (guix-bioc packages d)
Home page: https://bioconductor.org/packages/diggit
Licenses: FSDG-compatible
Build system: r
Synopsis: Inference of Genetic Variants Driving Cellular Phenotypes
Description:

Inference of Genetic Variants Driving Cellullar Phenotypes by the DIGGIT algorithm.

r-muscle 3.52.0
Propagated dependencies: r-biostrings@2.78.0
Channel: guix-bioc
Location: guix-bioc/packages/m.scm (guix-bioc packages m)
Home page: http://www.drive5.com/muscle/
Licenses: FSDG-compatible
Build system: r
Synopsis: Multiple Sequence Alignment with MUSCLE
Description:

MUSCLE performs multiple sequence alignments of nucleotide or amino acid sequences.

r-aisoph 0.4
Propagated dependencies: r-survival@3.8-3 r-iso@0.0-21
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://cran.r-project.org/package=aisoph
Licenses: GPL 2+
Build system: r
Synopsis: Additive Isotonic Proportional Hazards Model
Description:

Nonparametric estimation of additive isotonic covariate effects for proportional hazards model.

r-biodem 0.5
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://cran.r-project.org/package=Biodem
Licenses: GPL 2
Build system: r
Synopsis: Biodemography Functions
Description:

The Biodem package provides a number of functions for Biodemographic analysis.

r-edstan 1.1.0
Propagated dependencies: r-rstan@2.32.7 r-ggplot2@4.0.1
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://cran.r-project.org/package=edstan
Licenses: Modified BSD
Build system: r
Synopsis: Stan Models for Item Response Theory
Description:

Streamlines the fitting of common Bayesian item response models using Stan.

r-gamreg 0.3
Channel: guix-cran
Location: guix-cran/packages/g.scm (guix-cran packages g)
Home page: https://cran.r-project.org/package=gamreg
Licenses: GPL 2+
Build system: r
Synopsis: Robust and Sparse Regression via Gamma-Divergence
Description:

Robust regression via gamma-divergence with L1, elastic net and ridge.

r-gigrvg 0.8
Channel: guix-cran
Location: guix-cran/packages/g.scm (guix-cran packages g)
Home page: https://cran.r-project.org/package=GIGrvg
Licenses: GPL 2+
Build system: r
Synopsis: Random Variate Generator for the GIG Distribution
Description:

Generator and density function for the Generalized Inverse Gaussian (GIG) distribution.

r-imtest 1.0.0
Propagated dependencies: r-reshape2@1.4.5 r-mass@7.3-65 r-ltm@1.2-0 r-lme4@1.1-37
Channel: guix-cran
Location: guix-cran/packages/i.scm (guix-cran packages i)
Home page: https://cran.r-project.org/package=IMTest
Licenses: GPL 2+
Build system: r
Synopsis: Information Matrix Test for Generalized Partial Credit Models
Description:

Implementation of the information matrix test for generalized partial credit models.

r-newsmd 0.5.1
Channel: guix-cran
Location: guix-cran/packages/n.scm (guix-cran packages n)
Home page: https://github.com/Dschaykib/newsmd
Licenses: Expat
Build system: r
Synopsis: Creation of NEWS.md File
Description:

Adding updates (version or bullet points) to the NEWS.md file.

r-oaxaca 0.1.5
Propagated dependencies: r-reshape2@1.4.5 r-ggplot2@4.0.1 r-formula@1.2-5
Channel: guix-cran
Location: guix-cran/packages/o.scm (guix-cran packages o)
Home page: https://cran.r-project.org/package=oaxaca
Licenses: GPL 2+
Build system: r
Synopsis: Blinder-Oaxaca Decomposition
Description:

An implementation of the Blinder-Oaxaca decomposition for linear regression models.

r-sistmr 0.1.1
Propagated dependencies: r-scales@1.4.0 r-rlang@1.1.6 r-ggrepel@0.9.6 r-ggplot2@4.0.1 r-ggbeeswarm@0.7.2 r-dplyr@1.1.4 r-blandaltmanleh@0.3.1
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=sistmr
Licenses: Expat
Build system: r
Synopsis: Collection of Utility Function from the Inserm/Inria SISTM Team
Description:

This package provides functions common to members of the SISTM team.

r-smleph 0.1.0
Propagated dependencies: r-splines2@0.5.4 r-mass@7.3-65
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://github.com/taehwa015/smlePH/
Licenses: GPL 3+
Build system: r
Synopsis: Sieve Maximum Full Likelihood Estimation for the Right-Censored Proportional Hazards Model
Description:

Fitting the full likelihood proportional hazards model and extracting the residuals.

r-tinsel 0.0.1
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/nteetor/tinsel
Licenses: Expat
Build system: r
Synopsis: Transform Functions using Decorators
Description:

Instead of nesting function calls, annotate and transform functions using "#." comments.

hare-rss 0.0.0-0.1b51bb3
Dependencies: hare-xml@0.0.0-0.1e4db08
Channel: guixrus
Location: guixrus/packages/common/hare.scm (guixrus packages common hare)
Home page: https://sr.ht/~chrisppy/hare-rss
Licenses: MPL 2.0
Build system: hare
Synopsis: Implementation of the RSS format for Hare
Description:

This package provides an implementation of the RSS syndication format for Hare.

r-r-huge 0.10.1
Propagated dependencies: r-r-methodss3@1.8.2 r-r-oo@1.27.1 r-r-utils@2.13.0
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/HenrikBengtsson/R.huge
Licenses: LGPL 2.1+
Build system: r
Synopsis: Methods for accessing huge amounts of data
Description:

This is a deprecated package for accessing huge amounts of data. Cross-platform alternatives are the following packages: bigmemory (CRAN), ff (CRAN), or BufferedMatrix (Bioconductor). The main usage of it was inside the aroma.affymetrix package.

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