This package provides functions for easily manipulating colors, creating color scales and calculating color distances.

This package contains functions for non-parametric survival analysis of exact and interval-censored observations.

DEGseq is an R package to identify differentially expressed genes from RNA-Seq data.

QC pipeline and data analysis tools for high-dimensional Illumina mRNA expression data.

scTGIF connects the cells and the related gene functions without cell type label.

Subsampling of high throughput sequencing count data for use in experiment design and analysis.

variant-transcription factor-phenotype networks, inspired by Maurano et al., Science (2012), PMID 22955828.

Manipulate and view coronavirus data and other societally relevant data at a basic level.

This package contains the Commercial Modular Aero-Propulsion System Simulation (C-MAPSS) data set.

Import data from Epidata XML files .epx and convert it to R data structures.

SHE, FORAM Index and ABC Method analyses and custom plot functions for community data.

Embarrassingly Parallel Linear Mixed Model calculations spread across local cores which repeat until convergence.

Estimate and confidence/credible intervals for an unknown regressor x0 given an observed y0.

Set of functions to estimate kidney function and other traits of interest in nephrology.

This package provides functions to compute quasi variances and associated measures of approximation error.

This package provides a simple HTTP server allows to connect GUI clients to R.

This package provides a toolset for interactively exploring the differences between two data frames.

This is a package for identification of metabolites using high precision mass spectrometry. MS peaks are used to derive a ranked list of sum formulae, alternatively for a given sum formula the theoretical isotope distribution can be calculated to search in MS peak lists.

This package provides comprehensive methods for testing, estimating, and conducting uniform inference on quantile treatment effects (QTEs) in sharp regression discontinuity (RD) designs, incorporating covariates and implementing robust bias correction methods of Qu, Yoon, Perron (2024) <doi:10.1162/rest_a_01168>.

Software for genomic prediction with the RR-BLUP mixed model (Endelman 2011, <doi:10.3835/plantgenome2011.08.0024>). One application is to estimate marker effects by ridge regression; alternatively, BLUPs can be calculated based on an additive relationship matrix or a Gaussian kernel.

An R API Client for Valve's Dota2. RDota2 can be easily used to connect to the Steam API and retrieve data for Valve's popular video game Dota2. You can find out more about Dota2 at <http://store.steampowered.com/app/570/>.

Calculates the Kelly criterion (Kelly, J.L. (1956) <doi:10.1002/j.1538-7305.1956.tb03809.x>) for bets given quoted prices, model predictions and commissions. Additionally it contains helper functions to calculate the probabilities for wins and draws in multi-leg games.

This package uses both ridge and lasso penalties (and extensions) to penalize specific parameters in structural equation models. The package offers additional cost functions, cross validation, and other extensions beyond traditional structural equation models. It also contains a function to perform exploratory mediation (XMed).

This package provides very fast read and write access to images stored in the NIfTI-1 and ANALYZE-7.5 formats, with seamless synchronisation between compiled C and interpreted R code. It also provides a C/C++ API that can be used by other packages.