Query information and generate badge for using in README and GitHub Pages.
Set of methods to constrain numerical series and time series within arbitrary boundaries.
Manipulate and analyze 3-D structural geometry of Protein Data Bank (PDB) files.
Evolutionary relatedness dependent diversification simulation powered by the Rcpp back-end SimTable'.
Package for time value of money calculation, time series analysis and computational finance.
This package implements instrumental variable estimators for 2^K factorial experiments with noncompliance.
This package provides a coherent interface and implementation for creating grouped date classes.
Symbolic calculation (addition or multiplication) and evaluation of multivariate polynomials with rational coefficients.
For use in summary functions to omit missing values conditionally using specified checks.
Create regression tables for publication. Currently supports lm', glm', survreg', and ivreg outputs.
Access data and processing functionalities of openEO compliant back-ends in R.
This package provides a set of functions to quantify and visualise social autocorrelation.
Fast Multiplication and Marginalization of Sparse Tables <doi:10.18637/jss.v111.i02>.
MCView creates a Shiny app facilitating interactive exploration and annotation of Metacell models.
Download large sections of GenBank <https://www.ncbi.nlm.nih.gov/genbank/> and generate a local SQL-based database. A user can then query this database using restez functions or through rentrez <https://CRAN.R-project.org/package=rentrez> wrappers.
Random univariate and multivariate finite mixture model generation, estimation, clustering, latent class analysis and classification. Variables can be continuous, discrete, independent or dependent and may follow normal, lognormal, Weibull, gamma, Gumbel, binomial, Poisson, Dirac, uniform or circular von Mises parametric families.
This package provides a method for fitting the entire regularization path of the reluctant generalized additive model (RGAM) for linear regression, logistic, Poisson and Cox regression models. See Tay, J. K., and Tibshirani, R., (2019) <arXiv:1912.01808> for details.
R6 class interface for handling relational database connections using DBI package as backend. The class allows handling of connections to e.g. PostgreSQL, MariaDB and SQLite. The purpose is having an intuitive object allowing straightforward handling of SQL databases.
This package provides a programmatic client for the eBird database (<https://ebird.org/home>), including functions for searching for bird observations by geographic location (latitude, longitude), eBird hotspots, location identifiers, by notable sightings, by region, and by taxonomic name.
The Regional Vulnerability Index (RVI), a statistical measure of brain structural abnormality, quantifies an individual's similarity to the expected pattern (effect size) of deficits in schizophrenia (Kochunov P, Fan F, Ryan MC, et al. (2020) <doi:10.1002/hbm.25045>).
This package provides a series of functions to call AD Model Builder (i.e., compile and run models) from within R, read the results back into R as admb objects, and provide standard accessors (i.e. coef(), vcov(), etc.).
This package provides a set of tools to extract bibliographic content from the National Center for Biotechnology Information (NCBI) databases, including PubMed. The name RISmed is a portmanteau of RIS (for Research Information Systems, a common tag format for bibliographic data) and PubMed.
The minimum covariance determinant estimator is used to perform robust quadratic discriminant analysis, including cross-validation. References: Friedman J., Hastie T. and Tibshirani R. (2009). "The elements of statistical learning", 2nd edition. Springer, Berlin. <doi:10.1007/978-0-387-84858-7>.
Universal S-expression parser with specific support for Common Lisp, Scheme, and RDF/SPARQL.