R interface to CPLEX solvers for linear, quadratic, and (linear and quadratic) mixed integer programs. Support for quadratically constrained programming is available. See the file "INSTALL" for details on how to install the Rcplex package in Linux/Unix-like and Windows systems. Support for sparse matrices is provided by an S3-style class "simple_triplet_matrix" from package slam and by objects from the Matrix package class hierarchy.
Create Tables for Reporting Clinical Trials. Calculates descriptive statistics and hypothesis tests, arranges the results in a table ready for reporting with LaTeX
, HTML or Word.
Play casino games in the R console, including poker, blackjack, and a slot machine. Try to build your fortune before you succumb to the gambler's ruin!
Fast functions for effective sample size, weighted multivariate mean, variance, and quantile computation, and weight diagnostic plot for generic importance sampling type or other probability weighted samples.
This package contains functions to perform copula estimation by the non-parametric Bayesian method, Dirichlet-based Polya Tree. See Ning (2018) <doi:10.1080/00949655.2017.1421194>.
Create a grid-based graphviz using the following functions: 1 - Creating the data.frame where the nodes are; 2 - Adding and editing nodes; 3 - Plotting these nodes.
This package provides functions to compute generalized eigenvalues and eigenvectors, the generalized Schur decomposition and the generalized Singular Value Decomposition of a matrix pair, using Lapack routines.
Package for Genetic Epidemiologic Methods Developed at MSKCC. It contains functions to calculate haplotype specific odds ratio and the power of two stage design for GWAS studies.
This package provides methods to perform and analyse I-prior regression models. Estimation is done either via direct optimisation of the log-likelihood or an EM algorithm.
One-way and two-way analysis of variance for replicated point patterns, grouped by one or two classification factors, on the basis of the corresponding K-functions.
Interact with LaminDB
'. LaminDB
is an open-source data framework for biology. This package allows you to query and download data from LaminDB
instances.
This package contains functions for performing Mokken scale analysis on test and questionnaire data. It includes an automated item selection algorithm, and various checks of model assumptions.
Geospatial data for creating maps of New South Wales (NSW), Australia, and some helpers to work with common problems like normalising postcodes. Registers its data with cartographer'.
Implementation for nFunNN
method, which is a novel nonlinear functional principal component analysis method using neural networks. The crucial function of this package is nFunNNmodel()
.
Body Shape and related measurements from the US National Health and Nutrition Examination Survey (NHANES, 1999-2004). See http://www.cdc.gov/nchs/nhanes.htm for details.
Various useful functions for statisticians: describe data, plot Kaplan-Meier curves with numbers of subjects at risk, compare data sets, display spaghetti-plot, build multi-contingency tables...
An R-Shiny application implementing a method of sexing the human os coxae based on logistic regressions and Bruzek's nonmetric traits <doi:10.1002/ajpa.23855>.
Deterministic Pena-Yohai initial estimator for robust S estimators of regression. The procedure is described in detail in Pena, D., & Yohai, V. (1999) <doi:10.2307/2670164>.
Efficiently solve quadratic problems with linear inequality, equality and box constraints. The method used is outlined in D. Goldfarb, and A. Idnani (1983) <doi:10.1007/BF02591962>.
Supporting materials for a course and book on data visualization. It contains utility functions for graphs and several sample data sets. See Healy (2019) <ISBN 978-0691181622>.
Wrapping and supplementing commonly used functions in the R ecosystem related to spatial data science, while serving as a basis for other packages maintained by Wenbo Lv.
Interactive shiny application for working with Structural Equation Modelling technique. Runtime examples are provided in the package function as well as at <https://kartikeyab.shinyapps.io/semwebappk/> .
An optimal alternating optimization algorithm for estimation of precision matrices of sparse tensor graphical models, and an efficient inference procedure for support recovery of the precision matrices.
Framework to run Monte Carlo simulations over a parameter grid. Allows to parallelize the simulations. Generates plots and LaTeX
tables summarizing the results from the simulation.