_            _    _        _         _
      /\ \         /\ \ /\ \     /\_\      / /\
      \_\ \       /  \ \\ \ \   / / /     / /  \
      /\__ \     / /\ \ \\ \ \_/ / /     / / /\ \__
     / /_ \ \   / / /\ \ \\ \___/ /     / / /\ \___\
    / / /\ \ \ / / /  \ \_\\ \ \_/      \ \ \ \/___/
   / / /  \/_// / /   / / / \ \ \        \ \ \
  / / /      / / /   / / /   \ \ \   _    \ \ \
 / / /      / / /___/ / /     \ \ \ /_/\__/ / /
/_/ /      / / /____\/ /       \ \_\\ \/___/ /
\_\/       \/_________/         \/_/ \_____\/
xorg-rgb 1.1.0
Dependencies: xorgproto@2024.1
Channel: guix
Location: gnu/packages/xorg.scm (gnu packages xorg)
Home page: https://www.x.org/wiki/
Licenses: X11
Build system: gnu
Synopsis: X color name database
Description:

This package provides the X color name database.

r-sitree 0.1-15
Propagated dependencies: r-ggplot2@4.0.3 r-data-table@1.18.4
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=sitree
Licenses: GPL 2+
Build system: r
Synopsis: Single Tree Simulator
Description:

Framework to build an individual tree simulator.

r-tmsens 0.4.0
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/dea-hazewinkel/tmsens
Licenses: GPL 3+
Build system: r
Synopsis: Sensitivity Analysis Using the Trimmed Means Estimator
Description:

Sensitivity analysis using the trimmed means estimator.

r-tracer 1.0.0
Propagated dependencies: r-prettycode@1.1.0 r-crayon@1.5.3 r-clisymbols@1.2.0
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/mangothecat/tracer#readme
Licenses: Expat
Build system: r
Synopsis: Slick Call Stacks
Description:

Better looking call stacks after an error.

r-readxl 1.5.0
Propagated dependencies: r-cellranger@1.1.0 r-cpp11@0.5.5 r-progress@1.2.3 r-tibble@3.3.1
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://readxl.tidyverse.org
Licenses: GPL 3 FreeBSD Boost 1.0
Build system: r
Synopsis: Read Excel files
Description:

This package lets you import Excel files into R. It supports .xls via the embedded libxls C library and .xlsx via the embedded RapidXML C++ library.

r-r3cpet 1.44.0
Propagated dependencies: r-s4vectors@0.50.1 r-reshape2@1.4.5 r-rcurl@1.98-1.19 r-rcpp@1.1.1-1.1 r-pheatmap@1.0.13 r-iranges@2.46.0 r-igraph@2.3.2 r-hmisc@5.2-5 r-ggplot2@4.0.3 r-ggbio@1.60.0 r-genomicranges@1.64.0 r-genomeinfodb@1.48.0 r-data-table@1.18.4 r-clvalid@0.7 r-biocgenerics@0.58.1
Channel: guix-bioc
Location: guix-bioc/packages/r.scm (guix-bioc packages r)
Home page: https://bioconductor.org/packages/R3CPET
Licenses: FSDG-compatible
Build system: r
Synopsis: 3CPET: Finding Co-factor Complexes in Chia-PET experiment using a Hierarchical Dirichlet Process
Description:

The package provides a method to infer the set of proteins that are more probably to work together to maintain chormatin interaction given a ChIA-PET experiment results.

r-ratios 1.2.0
Propagated dependencies: r-stringr@1.6.0 r-data-table@1.18.4
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=ratios
Licenses: GPL 3
Build system: r
Synopsis: Calculating Ratios Between Two Data Sets and Correction for Adhering Particles on Plants
Description:

Calculation of ratios between two data sets containing environmental data like element concentrations by different methods. Additionally plant element concentrations can be corrected for adhering particles (soil, airborne dust).

r-readsx 0.8.8
Propagated dependencies: r-rlang@1.2.0 r-readxl@1.5.0 r-cli@3.6.6
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/NIFU-NO/readSX
Licenses: Expat
Build system: r
Synopsis: Read 'SurveyXact' Data
Description:

Imports data from the SurveyXact commercial service <https://rambollxact.com>, adds variable labels, and converts value labels to factors in the same order as exported from SurveyXact'.

r-refset 0.1.1
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: http://github.com/hughjonesd/refset
Licenses: GPL 2
Build system: r
Synopsis: Subsets with Reference Semantics
Description:

This package provides subsets with reference semantics, i.e. subsets which automatically reflect changes in the original object, and which optionally update the original object when they are changed.

r-rgreat 2.14.0
Propagated dependencies: r-annotationdbi@1.74.0 r-circlize@0.4.18 r-digest@0.6.39 r-doparallel@1.0.17 r-dt@0.34.0 r-foreach@1.5.2 r-genomeinfodb@1.48.0 r-genomicfeatures@1.64.0 r-genomicranges@1.64.0 r-getoptlong@1.1.1 r-globaloptions@0.1.4 r-go-db@3.23.1 r-iranges@2.46.0 r-org-hs-eg-db@3.23.1 r-progress@1.2.3 r-rcolorbrewer@1.1-3 r-rcpp@1.1.1-1.1 r-rcurl@1.98-1.19 r-rjson@0.2.23 r-s4vectors@0.50.1 r-shiny@1.13.0 r-txdb-hsapiens-ucsc-hg19-knowngene@3.22.1 r-txdb-hsapiens-ucsc-hg38-knowngene@3.22.0
Channel: guix
Location: gnu/packages/bioconductor.scm (gnu packages bioconductor)
Home page: https://github.com/jokergoo/rGREAT
Licenses: Expat
Build system: r
Synopsis: Client for GREAT analysis
Description:

This package makes GREAT (Genomic Regions Enrichment of Annotations Tool) analysis automatic by constructing a HTTP POST request according to user's input and automatically retrieving results from GREAT web server.

r-regrsm 0.5
Propagated dependencies: r-rmpi@0.7-3.4 r-foreach@1.5.2 r-doparallel@1.0.17
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: http://www.ipipan.eu/~teisseyrep/SOFTWARE/
Licenses: LGPL 2.0 LGPL 3 GPL 2 GPL 3
Build system: r
Synopsis: Random Subspace Method (RSM) for Linear Regression
Description:

This package performs Random Subspace Method (RSM) for high-dimensional linear regression to obtain variable importance measures. The final model is chosen based on validation set or Generalized Information Criterion.

r-refund 0.1-40
Propagated dependencies: r-rlrsim@3.1-9 r-pbs@1.1 r-nlme@3.1-169 r-mgcv@1.9-4 r-matrix@1.7-5 r-mass@7.3-65 r-magic@1.6-1 r-lme4@2.0-1 r-lattice@0.22-9 r-grpreg@3.6.0 r-ggplot2@4.0.3 r-gamm4@0.2-7 r-fda@6.3.0 r-boot@1.3-32
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/refunders/refund
Licenses: GPL 2+
Build system: r
Synopsis: Regression with Functional Data
Description:

This package provides methods for regression for functional data, including function-on-scalar, scalar-on-function, and function-on-function regression. Some of the functions are applicable to image data.

clasp-rt 1990.12.19-1.a6a7503
Channel: guix
Location: gnu/packages/lisp-check.scm (gnu packages lisp-check)
Home page: https://www.cliki.net/rt
Licenses: Expat
Build system: asdf/clasp
Synopsis: MIT Regression Tester
Description:

RT provides a framework for writing regression test suites.

cl-regex 1-1.fbc9a9f
Channel: guix
Location: gnu/packages/lisp-xyz.scm (gnu packages lisp-xyz)
Home page: https://github.com/michaelw/regex/
Licenses: FreeBSD
Build system: asdf/source
Synopsis: Regular expression engine for Common Lisp
Description:

This Common Lisp package provides a regular expression engine.

dune-rpc 3.19.1
Propagated dependencies: ocaml-csexp@1.5.1 dune-ordering@3.19.1 dune-dyn@3.19.1 ocaml-xdg@3.19.1 dune-stdune@3.19.1 ocaml-pp@2.0.0 ocaml-odoc@2.2.0
Channel: guix
Location: gnu/packages/ocaml.scm (gnu packages ocaml)
Home page: https://github.com/ocaml/dune
Licenses: Expat
Build system: dune
Synopsis: Communicate with ocaml dune using rpc
Description:

Library to connect and control a running dune instance.

r-nucler 2.44.0
Propagated dependencies: r-shortread@1.70.0 r-seqinfo@1.2.0 r-s4vectors@0.50.1 r-rsamtools@2.28.0 r-magrittr@2.0.5 r-iranges@2.46.0 r-ggplot2@4.0.3 r-genomicranges@1.64.0 r-dplyr@1.2.1 r-biostrings@2.80.1 r-biocgenerics@0.58.1 r-biobase@2.72.0
Channel: guix-bioc
Location: guix-bioc/packages/n.scm (guix-bioc packages n)
Home page: https://bioconductor.org/packages/nucleR
Licenses: LGPL 3+
Build system: r
Synopsis: Nucleosome positioning package for R
Description:

Nucleosome positioning for Tiling Arrays and NGS experiments.

r-bigvar 1.1.5
Propagated dependencies: r-zoo@1.8-15 r-rcppeigen@0.3.4.0.2 r-rcpparmadillo@15.2.7-1 r-rcpp@1.1.1-1.1 r-mass@7.3-65 r-lattice@0.22-9 r-abind@1.4-8
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://github.com/wbnicholson/BigVAR
Licenses: GPL 2+
Build system: r
Synopsis: Dimension Reduction Methods for Multivariate Time Series
Description:

Estimates VAR and VARX models with Structured Penalties.

r-dynsim 1.2.4
Propagated dependencies: r-mass@7.3-65 r-gridextra@2.3 r-ggplot2@4.0.3
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://cran.r-project.org/package=dynsim
Licenses: GPL 3
Build system: r
Synopsis: Dynamic Simulations of Autoregressive Relationships
Description:

Dynamic simulations and graphical depictions of autoregressive relationships.

r-fadist 2.4
Channel: guix-cran
Location: guix-cran/packages/f.scm (guix-cran packages f)
Home page: https://github.com/tpetzoldt/FAdist
Licenses: GPL 2
Build system: r
Synopsis: Distributions that are Sometimes Used in Hydrology
Description:

Probability distributions that are sometimes useful in hydrology.

r-mvhist 1.2
Propagated dependencies: r-simplicialcubature@1.3 r-rgl@1.3.36 r-rcdd@1.6-1 r-mvmesh@1.6
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://cran.r-project.org/package=mvhist
Licenses: GPL 3+
Build system: r
Synopsis: Multivariate Histograms
Description:

Tabulate and plot directional and other multivariate histograms.

r-oarray 1.4-9
Channel: guix-cran
Location: guix-cran/packages/o.scm (guix-cran packages o)
Home page: https://cran.r-project.org/package=Oarray
Licenses: GPL 2+ GPL 3+
Build system: r
Synopsis: Arrays with Arbitrary Offsets
Description:

Generalise the starting point of the array index.

r-raceid 0.4.1
Propagated dependencies: r-cluster@2.1.8.2 r-coop@0.6-3 r-fateid@0.2.2 r-fnn@1.1.4.1 r-fpc@2.2-14 r-ggplot2@4.0.3 r-ica@1.0-3 r-igraph@2.3.2 r-irlba@2.3.7 r-leiden@0.4.3.1 r-locfit@1.5-9.12 r-mass@7.3-65 r-matrix@1.7-5 r-matrixstats@1.5.0 r-pheatmap@1.0.13 r-princurve@2.1.6 r-quadprog@1.5-8 r-randomforest@4.7-1.2 r-rcolorbrewer@1.1-3 r-rcpp@1.1.1-1.1 r-rtsne@0.17 r-runner@0.4.6 r-umap@0.2.10.0 r-vegan@2.7-5
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/package=RaceID
Licenses: GPL 3
Build system: r
Synopsis: Algorithm for inferring cell types from single-cell RNA-seq data
Description:

This tool provides an algorithm to identify rare cell types in single-cell data. It also identifies abundant cell types. The method is based on transcript counts obtained with unique molecular identifies.

r-rminqa 0.3.1
Propagated dependencies: r-rcpp@1.1.1-1.1
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=rminqa
Licenses: GPL 2+
Build system: r
Synopsis: Derivative-Free Optimization in R using C++
Description:

Perform derivative-free optimization algorithms in R using C++. A wrapper interface is provided to call C function of the bobyqa implementation (See <https://github.com/emmt/Algorithms/tree/master/bobyqa>).

r-rprime 0.1.3
Propagated dependencies: r-stringr@1.6.0 r-stringi@1.8.7 r-plyr@1.8.9 r-assertthat@0.2.1
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/tjmahr/rprime
Licenses: GPL 2
Build system: r
Synopsis: Functions for Working with 'Eprime' Text Files
Description:

Eprime is a set of programs for administering psychological experiments by computer. This package provides functions for loading, parsing, filtering and exporting data in the text files produced by Eprime experiments.

Total packages: 33473