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r-optbin 1.4
Channel: guix-cran
Location: guix-cran/packages/o.scm (guix-cran packages o)
Home page: https://cran.r-project.org/package=optbin
Licenses: Modified BSD
Synopsis: Optimal Binning of Data
Description:

Defines thresholds for breaking data into a number of discrete levels, minimizing the (mean) squared error within all bins.

r-orthgs 0.1.6
Propagated dependencies: r-treetools@1.13.1 r-seqinr@4.2-36 r-phytools@2.4-4 r-phangorn@2.12.1 r-igraph@2.1.1 r-castor@1.8.2 r-bio3d@2.4-5 r-ape@5.8
Channel: guix-cran
Location: guix-cran/packages/o.scm (guix-cran packages o)
Home page: https://cran.r-project.org/package=orthGS
Licenses: GPL 2+
Synopsis: Orthology vs Paralogy Relationships among Glutamine Synthetase from Plants
Description:

This package provides tools to analyze and infer orthology and paralogy relationships between glutamine synthetase proteins in seed plants.

r-parglm 0.1.7
Propagated dependencies: r-rcpparmadillo@14.0.2-1 r-rcpp@1.0.13-1 r-matrix@1.7-1
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://github.com/boennecd/parglm
Licenses: GPL 2
Synopsis: Parallel GLM
Description:

This package provides a parallel estimation method for generalized linear models without compiling with a multithreaded LAPACK or BLAS.

r-pecora 0.1.2
Propagated dependencies: r-rcpparmadillo@14.0.2-1 r-rcpp@1.0.13-1 r-matrixstats@1.4.1
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=pecora
Licenses: GPL 2+
Synopsis: Permutation Conditional Random Tests
Description:

It provides functions to perform permutation conditional random one-sample and two-samples t-tests in a multivariate framework.

r-sudoku 2.8
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=sudoku
Licenses: GPL 2+ GPL 3+
Synopsis: Sudoku Puzzle Generator and Solver
Description:

Generates, plays, and solves Sudoku puzzles. The GUI playSudoku() needs package "tkrplot" if you are not on Windows.

r-turner 0.1.9
Propagated dependencies: r-tester@0.2.0
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://fbertran.github.io/turner/
Licenses: GPL 3
Synopsis: Turn Vectors and Lists of Vectors into Indexed Structures
Description:

Package designed for working with vectors and lists of vectors, mainly for turning them into other indexed data structures.

r-usingr 2.0-7
Propagated dependencies: r-mass@7.3-61 r-hmisc@5.2-0 r-histdata@0.9-3
Channel: guix-cran
Location: guix-cran/packages/u.scm (guix-cran packages u)
Home page: https://cran.r-project.org/package=UsingR
Licenses: GPL 2+
Synopsis: Data Sets, Etc. for the Text "Using R for Introductory Statistics", Second Edition
Description:

This package provides a collection of data sets to accompany the textbook "Using R for Introductory Statistics," second edition.

r-cghmcr 1.64.0
Propagated dependencies: r-limma@3.62.1 r-dnacopy@1.80.0 r-cntools@1.62.0 r-biocgenerics@0.52.0
Channel: guix-bioc
Location: guix-bioc/packages/c.scm (guix-bioc packages c)
Home page: https://bioconductor.org/packages/cghMCR
Licenses: LGPL 2.0+
Synopsis: Find chromosome regions showing common gains/losses
Description:

This package provides functions to identify genomic regions of interests based on segmented copy number data from multiple samples.

r-proper 1.38.0
Propagated dependencies: r-edger@4.4.0
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://bioconductor.org/packages/PROPER
Licenses: GPL 2+ GPL 3+
Synopsis: PROspective Power Evaluation for RNAseq
Description:

This package provide simulation based methods for evaluating the statistical power in differential expression analysis from RNA-seq data.

r-gtrack 0.1.0-1.a694fa3
Propagated dependencies: r-biocgenerics@0.52.0 r-data-table@1.16.2 r-genomeinfodb@1.42.0 r-genomicranges@1.58.0 r-gutils@0.2.0-1.10e36c7 r-iranges@2.40.0 r-matrix@1.7-1 r-rcolorbrewer@1.1-3 r-rcpp@1.0.13-1 r-rcurl@1.98-1.16 r-rtracklayer@1.66.0 r-s4vectors@0.44.0
Channel: guix
Location: gnu/packages/bioinformatics.scm (gnu packages bioinformatics)
Home page: https://github.com/mskilab/gTrack/
Licenses: GPL 2
Synopsis: Plot tracks of complex genomic data across multiple genomic windows
Description:

This package provides an object for plotting GRanges, RleList, UCSC file formats, and ffTrack objects in multi-track panels.

r-gg-gap 1.3
Propagated dependencies: r-cowplot@1.1.3 r-ggplot2@3.5.1
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/ChrisLou-bioinfo/gg.gap
Licenses: GPL 3
Synopsis: Define segments on the y-axis for ggplot2
Description:

The gg.gap function enables you to define segments for the y-axis in a ggplot2 plot.

r-locpol 0.8.0
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/locpol/
Licenses: GPL 2+
Synopsis: Kernel Local Polynomial Regression
Description:

Computes local polynomial estimators for the regression and also density. It comprises several different utilities to handle kernel estimators.

rust-cap 0.1.2
Channel: guix
Location: gnu/packages/crates-io.scm (gnu packages crates-io)
Home page: https://github.com/alecmocatta/cap
Licenses: Expat ASL 2.0
Synopsis: Allocator that can track and limit memory usage
Description:

This crate provides a generic allocator that wraps another allocator, tracking memory usage and enabling limits to be set.

rust-bat 0.24.0
Dependencies: libgit2@1.7.2 openssl@3.0.8 zlib@1.3
Channel: guix
Location: gnu/packages/crates-io.scm (gnu packages crates-io)
Home page: https://github.com/sharkdp/bat
Licenses: Expat ASL 2.0
Synopsis: Library providing syntax highlighting for text
Description:

This package provides the bat syntax highlighter as a library to use for syntax highlighting in other crates.

rust-lab 0.11.0
Channel: guix
Location: gnu/packages/crates-io.scm (gnu packages crates-io)
Home page: https://github.com/TooManyBees/lab
Licenses: Expat
Synopsis: Convert RGB to CIE-LAB for Rust
Description:

This package contains tools for converting RGB colors to the CIE-LAB color space, and comparing differences in color.

rust-fnv 1.0.7
Channel: guix
Location: gnu/packages/crates-io.scm (gnu packages crates-io)
Home page: https://github.com/servo/rust-fnv
Licenses: ASL 2.0 Expat
Synopsis: Implementation of the Fowler-Noll-Vo hash function
Description:

The fnv hash function is a custom Hasher implementation that is more efficient for smaller hash keys.

ecl-rove 0.10.0-1.6a5dfcd
Dependencies: ecl-bordeaux-threads@0.9.3 ecl-dissect@1.0.0-2.a70cabc ecl-trivial-gray-streams@2.0-1.2b3823e
Channel: guix
Location: gnu/packages/lisp-check.scm (gnu packages lisp-check)
Home page: https://github.com/fukamachi/rove
Licenses: Modified BSD
Synopsis: Yet another common lisp testing library
Description:

Rove is a unit testing framework for Common Lisp applications. This is intended to be a successor of Prove.

rtmpdump 2.4-0.c5f04a5
Dependencies: gnutls@3.8.3 zlib@1.3
Channel: guix
Location: gnu/packages/networking.scm (gnu packages networking)
Home page: https://rtmpdump.mplayerhq.hu/
Licenses: LGPL 2.1+ GPL 2+
Synopsis: Tools and library for handling RTMP streams
Description:

RTMPdump is a toolkit for RTMP streams. All forms of RTMP are supported, including rtmp://, rtmpt://, rtmpe://, rtmpte://, and rtmps://.

ruby-ast 2.4.2
Channel: guix
Location: gnu/packages/ruby.scm (gnu packages ruby)
Home page: https://whitequark.github.io/ast/
Licenses: Expat
Synopsis: Library for working with Abstract Syntax Trees
Description:

ast is a Ruby library for working with Abstract Syntax Trees. It does this through immutable data structures.

r-tibble 3.2.1
Propagated dependencies: r-fansi@1.0.6 r-lifecycle@1.0.4 r-magrittr@2.0.3 r-pillar@1.9.0 r-pkgconfig@2.0.3 r-rlang@1.1.4 r-vctrs@0.6.5
Channel: guix
Location: gnu/packages/statistics.scm (gnu packages statistics)
Home page: https://github.com/hadley/tibble
Licenses: Expat
Synopsis: Simple data frames
Description:

This package provides a tbl_df class that offers better checking and printing capabilities than traditional data frames.

r-matrix 1.7-1
Propagated dependencies: r-lattice@0.22-6
Channel: guix
Location: gnu/packages/statistics.scm (gnu packages statistics)
Home page: https://Matrix.R-forge.R-project.org/
Licenses: GPL 2+
Synopsis: Sparse and dense matrix classes and methods
Description:

This package provides classes and methods for dense and sparse matrices and operations on them using LAPACK and SuiteSparse.

r-rrbgen 0.0.6
Propagated dependencies: r-rcpp@1.0.13-1 r-rcpparmadillo@14.0.2-1
Channel: gn-bioinformatics
Location: gn/packages/bioinformatics.scm (gn packages bioinformatics)
Home page: https://github.com/rwdavies/rrbgen
Licenses: GPL 3
Synopsis: Lightweight limited functionality R bgen read/write library
Description:

r-rrbgen supports v1.3 of the bgen format. It supports reading and writing using 8, 16, 24 or 32 bits per probability, using Layout = 2 and CompressedSNPBlocks = 1, for bi-allelic SNPs with samples of ploidy 2. Any other format specification may crash unexpectedly without a properly defined error.

r-resurv 1.0.0
Dependencies: python@3.10.7
Propagated dependencies: r-xgboost@1.7.8.1 r-tidyverse@2.0.0 r-tidyr@1.3.1 r-tibble@3.2.1 r-synthetic@1.1.0 r-survival@3.7-0 r-shapforxgboost@0.1.3 r-rpart@4.1.23 r-reticulate@1.40.0 r-reshape2@1.4.4 r-purrr@1.0.2 r-ggplot2@3.5.1 r-forecast@8.23.0 r-fastdummies@1.7.4 r-dtplyr@1.3.1 r-dplyr@1.1.4 r-data-table@1.16.2 r-bshazard@1.2
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/edhofman/ReSurv
Licenses: GPL 2+
Synopsis: Machine Learning Models for Predicting Claim Counts
Description:

Prediction of claim counts using the feature based development factors introduced in the manuscript Hiabu M., Hofman E. and Pittarello G. (2023) <doi:10.48550/arXiv.2312.14549>. Implementation of Neural Networks, Extreme Gradient Boosting, and Cox model with splines to optimise the partial log-likelihood of proportional hazard models.

r-rlowdb 0.2.0
Propagated dependencies: r-yyjsonr@0.1.20 r-rlang@1.1.4 r-r6@2.5.1 r-purrr@1.0.2 r-cli@3.6.3
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/feddelegrand7/rlowdb
Licenses: Expat
Synopsis: Lightweight JSON-Based Database
Description:

The goal of rlowdb is to provide a lightweight, file-based JSON database. Inspired by LowDB in JavaScript', it generates an intuitive interface for storing, retrieving, updating, and querying structured data without requiring a full-fledged database system. Ideal for prototyping, small-scale applications, and lightweight data management needs.

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