Perform mediation analysis via the fast-and-robust bootstrap test ROBMED (Alfons, Ates & Groenen, 2022a; <doi:10.1177/1094428121999096>), as well as various other methods. Details on the implementation and code examples can be found in Alfons, Ates, and Groenen (2022b) <doi:10.18637/jss.v103.i13>. Further discussion on robust mediation analysis can be found in Alfons & Schley (2025) <doi:10.1002/wics.70051>.

Fit-Hi-C is a tool for assigning statistical confidence estimates to intra-chromosomal contact maps produced by genome-wide genome architecture assays such as Hi-C.

rTorrent is a BitTorrent client with an ncurses interface. It supports full encryption, DHT, PEX, and Magnet Links. It can also be controlled via XML-RPC over SCGI.

This package lets you download Google fonts and generate CSS to use in rmarkdown documents and Shiny applications. Some popular fonts are included and ready to use.

This package provides tools for the estimation of indicators on social exclusion and poverty, as well as an implementation of Pareto tail modeling for empirical income distributions.

This package is a toolkit for working with Bezier curves and splines. The package provides functions for point generation, arc length estimation, degree elevation and curve fitting.

This package provides functionality to dynamically define R functions and S4 methods with inlined C, C++ or Fortran code supporting .C and .Call calling conventions.

This is a package for mixed variable optimization for non-linear functions. It can optimize function whose inputs are a combination of continuous, ordered, and unordered variables.

This package provides utilities for working with Google APIs. This includes functions and classes for handling common credential types and for preparing, executing, and processing HTTP requests.

Package that implements the COSNet classification algorithm. The algorithm predicts node labels in partially labeled graphs where few positives are available for the class being predicted.

Trendy implements segmented (or breakpoint) regression models to estimate breakpoints which represent changes in expression for each feature/gene in high throughput data with ordered conditions.

Data on Asylum and Resettlement for the UK, provided by the Home Office <https://www.gov.uk/government/statistical-data-sets/immigration-system-statistics-data-tables>.

This package provides methods for fitting identity-link GLMs and GAMs to discrete data, using EM-type algorithms with more stable convergence properties than standard methods.

Simplifies aspects of linear regression analysis, particularly simultaneous inference. Additionally, supports "A Progressive Introduction to Linear Models" by Joshua French (<https://jfrench.github.io/LinearRegression/>).

The BAGofT assesses the goodness-of-fit of binary classifiers. Details can be found in Zhang, Ding and Yang (2021) <arXiv:1911.03063v2>.

Helpful functions for the cleaning and manipulation of surveillance data, especially with regards to the creation and validation of panel data from individual level surveillance data.

Perform bulk and cell type-specific expression quantitative trait loci mapping with our novel method (Little et al. (2023) <doi:10.1038/s41467-023-38795-w>).

This package provides functions for evaluating and visualizing ecological assessment procedures for surface waters containing physical, chemical and biological assessments in the form of value functions.

Log-ratio Lasso regression for continuous, binary, and survival outcomes with (longitudinal) compositional features. See Fei and others (2024) <doi:10.1016/j.crmeth.2024.100899>.

This package provides functions for financial analysis and financial modeling, including batch graphs generation, beta calculation, descriptive statistics, annuity calculation, bond pricing and financial data download.

This package provides a Gaussian or Student's t copula-based procedure for generating samples from discrete random variables with prescribed correlation matrix and marginal distributions.

This package provides a ggplot2 extension for creating 3D figures. Provides 3D geoms, stats, and a coord_3d() coordinate system supporting rotation, perspective, and lighting.

Assists in generating binary clustered data, estimates of Intracluster Correlation coefficient (ICC) for binary response in 16 different methods, and 5 different types of confidence intervals.

This package provides methods for fitting log-link GLMs and GAMs to binomial data, including EM-type algorithms with more stable convergence properties than standard methods.