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r-simgof 1.0.2
Propagated dependencies: r-ddst@1.4
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=simgof
Licenses: GPL 2
Synopsis: Simultaneous Goodness-of-Fits Tests
Description:

Routine that allows the user to run several goodness-of-fit tests. It also combines the tests and returns a properly adjusted family-wise p value. Details can be found in <arXiv:2007.04727>.

r-trdist 1.0.1
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://cran.r-project.org/package=trdist
Licenses: GPL 2+ GPL 3+
Synopsis: Univariate Proability Distributions with Truncation
Description:

Truncation of univariate probability distributions. The probability distribution can come from other packages so long as the function names follow the standard d, p, q, r naming format. Also other univariate probability distributions are included.

r-tndata 0.1.0
Propagated dependencies: r-stringr@1.5.1 r-purrr@1.0.4 r-lubridate@1.9.4 r-logger@0.4.0 r-jsonlite@2.0.0 r-httr2@1.1.2 r-httr@1.4.7 r-glue@1.8.0 r-fs@1.6.6 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/t.scm (guix-cran packages t)
Home page: https://github.com/aymennasri/tndata
Licenses: FSDG-compatible
Synopsis: Fetch Datasets from the Official Tunisian Data Catalog
Description:

Simplifies access to Tunisian government open data from <https://data.gov.tn/fr/>. Queries datasets by theme, author, or keywords, retrieves metadata, and gets structured results ready for analysis; all through the official CKAN API.

r-viscov 1.6.0
Propagated dependencies: r-trialr@0.1.6 r-scatterplot3d@0.3-44 r-kernsmooth@2.23-26 r-clustergeneration@1.3.8 r-bayesm@3.1-6
Channel: guix-cran
Location: guix-cran/packages/v.scm (guix-cran packages v)
Home page: https://cran.r-project.org/package=VisCov
Licenses: GPL 3+
Synopsis: Visualizing of Distributions of Covariance Matrices
Description:

Visualizing of distributions of covariance matrices. The package implements the methodology described in Tokuda, T., Goodrich, B., Van Mechelen, I., Gelman, A., & Tuerlinckx, F. (2012) <https://sites.stat.columbia.edu/gelman/research/unpublished/Visualization.pdf>.

r-visreg 2.7.0
Propagated dependencies: r-lattice@0.22-7
Channel: guix-cran
Location: guix-cran/packages/v.scm (guix-cran packages v)
Home page: http://pbreheny.github.io/visreg
Licenses: GPL 3
Synopsis: Visualization of Regression Models
Description:

This package provides a convenient interface for constructing plots to visualize the fit of regression models arising from a wide variety of models in R ('lm', glm', coxph', rlm', gam', locfit', lmer', randomForest', etc.).

r-zinar1 0.1.0
Propagated dependencies: r-vgam@1.1-13 r-statmod@1.5.0 r-scales@1.4.0 r-mass@7.3-65 r-gtools@3.9.5 r-gamlss-dist@6.1-1
Channel: guix-cran
Location: guix-cran/packages/z.scm (guix-cran packages z)
Home page: https://cran.r-project.org/package=ZINAR1
Licenses: GPL 3+
Synopsis: Simulates ZINAR(1) Model and Estimates Its Parameters Under Frequentist Approach
Description:

Generates Realizations of First-Order Integer Valued Autoregressive Processes with Zero-Inflated Innovations (ZINAR(1)) and Estimates its Parameters as described in Garay et al. (2021) <doi:10.1007/978-3-030-82110-4_2>.

r-kodata 1.34.0
Channel: guix-bioc
Location: guix-bioc/packages/k.scm (guix-bioc packages k)
Home page: https://bioconductor.org/packages/KOdata
Licenses: Expat
Synopsis: LINCS Knock-Out Data Package
Description:

This package contains consensus genomic signatures (CGS) for experimental cell-line specific gene knock-outs as well as baseline gene expression data for a subset of experimental cell-lines. Intended for use with package KEGGlincs.

r-seqcat 1.30.0
Propagated dependencies: r-variantannotation@1.54.1 r-tidyr@1.3.1 r-summarizedexperiment@1.38.1 r-scales@1.4.0 r-s4vectors@0.46.0 r-rtracklayer@1.68.0 r-rlang@1.1.6 r-iranges@2.42.0 r-ggplot2@3.5.2 r-genomicranges@1.60.0 r-genomeinfodb@1.44.0 r-dplyr@1.1.4
Channel: guix-bioc
Location: guix-bioc/packages/s.scm (guix-bioc packages s)
Home page: https://bioconductor.org/packages/seqCAT
Licenses: FSDG-compatible
Synopsis: High Throughput Sequencing Cell Authentication Toolkit
Description:

The seqCAT package uses variant calling data (in the form of VCF files) from high throughput sequencing technologies to authenticate and validate the source, function and characteristics of biological samples used in scientific endeavours.

r-signal 1.8-1
Propagated dependencies: r-mass@7.3-65
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/signal/
Licenses: GPL 2
Synopsis: Signal processing
Description:

This package provides a set of signal processing functions originally written for Matlab and GNU Octave. It includes filter generation utilities, filtering functions, resampling routines, and visualization of filter models. It also includes interpolation functions.

r-tensor 1.5
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/tensor/
Licenses: GPL 2+
Synopsis: Tensor product of arrays
Description:

The tensor product of two arrays is notionally an outer product of the arrays collapsed in specific extents by summing along the appropriate diagonals. This package allows you to compute the tensor product of arrays.

r-gaston 1.6
Dependencies: zlib@1.3
Propagated dependencies: r-rcpp@1.0.14 r-rcppeigen@0.3.4.0.2 r-rcppparallel@5.1.10
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/gaston/
Licenses: GPL 3
Synopsis: Genetic data handling (QC, GRM, LD, PCA) and linear mixed models
Description:

This is a package for the manipulation of genetic data (SNPs). Computation of genetic relationship matrix (GRM) and dominance matrix, linkage disequilibrium (LD), and heritability with efficient algorithms for linear mixed models (AIREML).

rust-dbl 0.3.2
Channel: guix
Location: gnu/packages/crates-io.scm (gnu packages crates-io)
Home page: https://docs.rs/dbl
Licenses: Expat ASL 2.0
Synopsis: Double operation in Galois Field
Description:

This package provides double and inverse double over Galois Field - GF(2^n). This trait is implemented for 64, 128 and 256 bit block sizes. Big-endian order is used. WARNING: Block must be aligned!

rust-wio 0.2.2
Channel: guix
Location: gnu/packages/crates-windows.scm (gnu packages crates-windows)
Home page: https://github.com/retep998/wio-rs
Licenses: Expat ASL 2.0
Synopsis: Windows IO wrapper
Description:

Wio is a middle-level wrapper around various things in Windows API. It is designed to be a very thin layer around Windows API to provide a safe Rusty API but without hiding any functionality.

r-robper 1.2.3
Propagated dependencies: r-robustbase@0.99-4-1 r-rgenoud@5.9-0.11 r-quantreg@6.1 r-bb@2019.10-1
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=RobPer
Licenses: GPL 3
Synopsis: Robust Periodogram and Periodicity Detection Methods
Description:

Calculates periodograms based on (robustly) fitting periodic functions to light curves (irregularly observed time series, possibly with measurement accuracies, occurring in astroparticle physics). Three main functions are included: RobPer() calculates the periodogram. Outlying periodogram bars (indicating a period) can be detected with betaCvMfit(). Artificial light curves can be generated using the function tsgen(). For more details see the corresponding article: Thieler, Fried and Rathjens (2016), Journal of Statistical Software 69(9), 1-36, <doi:10.18637/jss.v069.i09>.

r-rmcorr 0.7.0
Propagated dependencies: r-rcolorbrewer@1.1-3 r-psych@2.5.3
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/lmarusich/rmcorr
Licenses: GPL 2
Synopsis: Repeated Measures Correlation
Description:

Compute the repeated measures correlation, a statistical technique for determining the overall within-individual relationship among paired measures assessed on two or more occasions, first introduced by Bland and Altman (1995). Includes functions for diagnostics, p-value, effect size with confidence interval including optional bootstrapping, as well as graphing. Also includes several example datasets. For more details, see the web documentation <https://lmarusich.github.io/rmcorr/index.html> and the original paper: Bakdash and Marusich (2017) <doi:10.3389/fpsyg.2017.00456>.

r-rgugik 0.4.2
Propagated dependencies: r-sf@1.0-21 r-jsonlite@2.0.0
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://kadyb.github.io/rgugik/
Licenses: Expat
Synopsis: Search and Retrieve Spatial Data from 'GUGiK'
Description:

Automatic open data acquisition from resources of Polish Head Office of Geodesy and Cartography ('GŠówny UrzÄ d Geodezji i Kartografii') (<https://www.gov.pl/web/gugik>). Available datasets include various types of numeric, raster and vector data, such as orthophotomaps, digital elevation models (digital terrain models, digital surface model, point clouds), state register of borders, spatial databases, geometries of cadastral parcels, 3D models of buildings, and more. It is also possible to geocode addresses or objects using the geocodePL_get() function.

r-amapro 0.1.3
Propagated dependencies: r-htmlwidgets@1.6.4
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://github.com/helgasoft/amapro/
Licenses: FSDG-compatible
Synopsis: Thin Wrapper for Mapping Library 'AMap'
Description:

Build and control interactive 2D and 3D maps with R/Shiny'. Lean set of powerful commands wrapping native calls to AMap <https://lbs.amap.com/api/jsapi-v2/summary/>. Deliver rich mapping functionality with minimal overhead.

r-conflr 0.1.1
Propagated dependencies: r-xml2@1.3.8 r-stringi@1.8.7 r-shiny@1.10.0 r-rstudioapi@0.17.1 r-rmarkdown@2.29 r-rlang@1.1.6 r-r6@2.6.1 r-purrr@1.0.4 r-miniui@0.1.2 r-knitr@1.50 r-httr@1.4.7 r-glue@1.8.0 r-curl@6.2.2 r-commonmark@1.9.5 r-askpass@1.2.1
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://line.github.io/conflr/
Licenses: GPL 3
Synopsis: Client for 'Confluence' API
Description:

This package provides utilities for working with various Confluence API <https://docs.atlassian.com/ConfluenceServer/rest/latest/>, including a functionality to convert an R Markdown document to Confluence format and upload it to Confluence automatically.

r-cover2 1.0.0
Propagated dependencies: r-tidyr@1.3.1 r-terra@1.8-50 r-mgc@2.0.2 r-lubridate@1.9.4 r-jpeg@0.1-11 r-dplyr@1.1.4 r-autothresholdr@1.4.2
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://cran.r-project.org/package=coveR2
Licenses: Expat
Synopsis: Process Digital Cover Photography Images of Tree Crowns
Description:

Process Digital Cover Photography images of tree canopies to get canopy attributes like Foliage Cover and Leaf Area Index. Detailed description of the methods in Chianucci et al. (2022) <doi:10.1007/s00468-018-1666-3>.

r-casmap 0.6.1
Propagated dependencies: r-rcpp@1.0.14
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://cran.r-project.org/package=CASMAP
Licenses: GPL 2+
Synopsis: Detection of Statistically Significant Combinations of SNPs in Association Mapping
Description:

This package provides a significant pattern mining-based toolbox for region-based genome-wide association studies and higher-order epistasis analyses, implementing the methods described in Llinares-López et al. (2017) <doi:10.1093/bioinformatics/btx071>.

r-cclust 0.6-26
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://cran.r-project.org/package=cclust
Licenses: GPL 2
Synopsis: Convex Clustering Methods and Clustering Indexes
Description:

Convex Clustering methods, including K-means algorithm, On-line Update algorithm (Hard Competitive Learning) and Neural Gas algorithm (Soft Competitive Learning), and calculation of several indexes for finding the number of clusters in a data set.

r-datana 1.0.9
Propagated dependencies: r-hmisc@5.2-3 r-ggplot2@3.5.2
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://cran.r-project.org/package=datana
Licenses: GPL 3+
Synopsis: Datasets and Functions to Accompany Analisis De Datos Con R
Description:

Datasets and functions to accompany the book Analisis de datos con el programa estadistico R: una introduccion aplicada by Salas-Eljatib (2021, ISBN: 9789566086109). The package helps carry out data management, exploratory analyses, and model fitting.

r-diaplt 1.4.0
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://cran.r-project.org/package=diaplt
Licenses: Expat
Synopsis: Beads Summary Plot of Ranges
Description:

Visualize one-factor data frame. Beads plot consists of diamonds of each factor of each data series. A diamond indicates average and range. Look over a data frame with many numeric columns and a factor column.

r-dracor 0.2.6
Propagated dependencies: r-rcpp@1.0.14
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://github.com/natverse/dracor
Licenses: ASL 2.0
Synopsis: Decode Draco Format 3D Mesh Data
Description:

Decodes meshes and point cloud data encoded by the Draco mesh compression library from Google. Note that this is only designed for basic decoding and not intended as a full scale wrapping of the Draco library.

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