There is an increasing focus to investigate the association between rare variants and diseases. The REBET package implements the subREgion-based BurdEn Test which is a powerful burden test that simultaneously identifies susceptibility loci and sub-regions.

This package provides a set of functions for data manipulation with list objects, including mapping, filtering, grouping, sorting, updating, searching, and other useful functions. Most functions are designed to be pipeline friendly so that data processing with lists can be chained.

This package provides flexible, quantitative, and integrative genomic visualizations for publication-quality multi-panel figures.

This package provides simple utility functions to read from and write to the system clipboards.

Constructs confidence intervals on the probability of success in a binomial experiment via several parameterizations

Assertive Expressive (AE) is an assertions library specifically designed for reuse by other test frameworks.

Assertive Expressive (AE) is an assertions library specifically designed for reuse by other test frameworks.

This package provides a package for the orthology prediction data download from OMA database.

This package provides tools for quantifying DNA binding specificities based on SELEX-seq data.

RedeR is an R-based package combined with a stand-alone Java application for interactive visualization and manipulation of nested networks. Graph, node, and edge attributes can be configured using either graphical or command-line methods, following igraph syntax rules.

Rlottie is a platform independent standalone c++ library for rendering vector based animations and art in realtime.

This package provides tools for quality control, analysis and visualization of Illumina DNA methylation array data.

This package is intended to help users to efficiently analyze genomic data resulting from various experiments.

This package completes R's functional programming tools with missing features present in other programming languages.

ripMIME is a small program to extract the attached files out of a MIME-encoded email package.

This package provide a method for doing gene set analysis based on multiple omics data.

This package provides functions for computing and displaying sample size information for gene expression arrays.

Inference of protein activity from gene expression data, including the VIPER and msVIPER algorithms.

This package provides functionalities for downstream analysis, annotation and visualizaton of alternative splicing events generated by rMATS.

LIANA provides a number of methods and resource for ligand-receptor interaction inference from scRNA-seq data.

This package allows you to create Q-Q and Manhattan plots for GWAS data from PLINK results.

This package provides a general-purpose tool for dynamic report generation in R using Literate Programming techniques.

This package provides a simple interface for creating active bindings where the bound function accepts additional arguments.

BASIX provides some efficient C/C++ implementations of native R procedures to speed up calculations in R.