The TreeAndLeaf package combines unrooted and force-directed graph algorithms in order to layout binary trees, aiming to represent multiple layers of information onto dendrogram leaves.

Non-parametric trend comparison of two independent samples with sequential subsamples. For more details, please refer to Wang, Stapleton, and Chen (2018) <doi:10.1080/00949655.2018.1482492>.

This Haskell library provides a function for computing the difference between (expression) trees. It also provides a way to compute the difference between arbitrary abstract datatypes (ADTs) using Generics-derivable helpers.

This package provides a slightly-opinionated R interface for the Tremendous API (<https://www.tremendous.com/>). In addition to supporting GET and POST requests, tremendousr has, dare I say, tremendously intuitive functions for sending digital rewards and incentives directly from R.

ASM is an all purpose Java bytecode manipulation and analysis framework. It can be used to modify existing classes or dynamically generate classes, directly in binary form. The provided common transformations and analysis algorithms allow easily assembling custom complex transformations and code analysis tools.

ASM is an all purpose Java bytecode manipulation and analysis framework. It can be used to modify existing classes or dynamically generate classes, directly in binary form. The provided common transformations and analysis algorithms allow easily assembling custom complex transformations and code analysis tools.

This package provides an implementation of AA trees, a self-balancing binary tree data structure, for Guile. It ensure O(log n) worst case performance for core operations. The module provides non-mutating insert, delete, and search operations, with support for convenient nested tree operations.

Rose (n-ary) trees with both upwards- (i.e. cached) and downwards-traveling (i.e. accumulating) monoidal annotations. This is used as the core data structure underlying the diagrams framework, but potentially has other applications as well.

Innovative Trend Analysis is a graphical method to examine the trends in time series data. Sequential Mann-Kendall test uses the intersection of prograde and retrograde series to indicate the possible change point in time series data. Distribution free cumulative sum charts indicate location and significance of the change point in time series. Zekai, S. (2011). <doi:10.1061/(ASCE)HE.1943-5584.0000556>. Grayson, R. B. et al. (1996). Hydrological Recipes: Estimation Techniques in Australian Hydrology. Cooperative Research Centre for Catchment Hydrology, Australia, p. 125. Sneyers, S. (1990). On the statistical analysis of series of observations. Technical note no 5 143, WMO No 725 415. Secretariat of the World Meteorological Organization, Geneva, 192 pp.

Technology for Resting Email Encrypted Storage (TREES) is a NaCL-based Dovecot encryption plugin. This plugin adds individually encrypted mail storage to the Dovecot IMAP server. It is inspired by Posteo's scrambler which uses OpenSSL and RSA key pairs. TREES works in a similar way, but uses the Sodium crypto library (based on NaCL).

How it works:

1. On IMAP log in, the user's cleartext password is passed to the plugin.

2. The plugin creates an argon2 digest from the password.

3. This password digest is used as a symmetric secret to decrypt a libsodium secretbox.

4. Inside the secretbox is stored a Curve25519 private key.

5. The Curve25519 private key is used to decrypt each individual message, using libsodium sealed boxes.

6. New mail is encrypted as it arrives using the Curve25519 public key.

The aim of the R package treebalance is to provide functions for the computation of a large variety of (im)balance indices for rooted trees. The package accompanies the book Tree balance indices: a comprehensive survey by M. Fischer, L. Herbst, S. Kersting, L. Kuehn and K. Wicke (2023) <ISBN: 978-3-031-39799-8>, <doi:10.1007/978-3-031-39800-1>, which gives a precise definition for the terms balance index and imbalance index (Chapter 4) and provides an overview of the terminology in this manual (Chapter 2). For further information on (im)balance indices, see also Fischer et al. (2021) <https://treebalance.wordpress.com>. Considering both established and new (im)balance indices, treebalance provides (among others) functions for calculating the following 18 established indices and index families: the average leaf depth, the B1 and B2 index, the Colijn-Plazzotta rank, the normal, corrected, quadratic and equal weights Colless index, the family of Colless-like indices, the family of I-based indices, the Rogers J index, the Furnas rank, the rooted quartet index, the s-shape statistic, the Sackin index, the symmetry nodes index, the total cophenetic index and the variance of leaf depths. Additionally, we include 9 tree shape statistics that satisfy the definition of an (im)balance index but have not been thoroughly analyzed in terms of tree balance in the literature yet. These are: the total internal path length, the total path length, the average vertex depth, the maximum width, the modified maximum difference in widths, the maximum depth, the maximum width over maximum depth, the stairs1 and the stairs2 index. As input, most functions of treebalance require a rooted (phylogenetic) tree in phylo format (as introduced in ape 1.9 in November 2006). phylo is used to store (phylogenetic) trees with no vertices of out-degree one. For further information on the format we kindly refer the reader to E. Paradis (2012) <http://ape-package.ird.fr/misc/FormatTreeR_24Oct2012.pdf>.

Documentation at https://melpa.org/#/treeview

Documentation at https://melpa.org/#/treemacs

This package provides a Python implementation of a tree structure.

This package provides an abstract Emacs Lisp framework for tree navigation.

This package provides a Go grammar for the Tree-sitter library.

This package provides a GN grammar for the Tree-sitter library.

This package provides a GNU gettext translation file (PO/POT) grammar for the Tree-sitter library.

This distribution contains a suite of modules for representing, creating, and extracting information from HTML syntax trees.

Estimation of causal odds ratio and power calculation given trends in exposure prevalence and outcome frequencies of stratified data.

This package performs fast variable selection in high-dimensional settings while controlling the false discovery rate (FDR) at a user-defined target level. The package is based on the paper Machkour, Muma, and Palomar (2022) <arXiv:2110.06048>.

Tree is a python library for working with nested data structures. In a way, tree generalizes the builtin map function which only supports flat sequences, and allows you to apply a function to each leaf preserving the overall structure.

This package provides bindings to an R grammar for Tree-sitter', to be used alongside the treesitter package. Tree-sitter builds concrete syntax trees for source files of any language, and can efficiently update those syntax trees as the source file is edited.

Treemacs is a file and project explorer similar to NeoTree or Vim's NerdTree, but largely inspired by the Project Explorer in Eclipse. It shows the file system outlines of your projects in a simple tree layout allowing quick navigation and exploration, while also possessing basic file management utilities.