Rare variant association tests: burden tests (Bocher et al. 2019 <doi:10.1002/gepi.22210>) and the Sequence Kernel Association Test (Bocher et al. 2021 <doi:10.1038/s41431-020-00792-8>) in the whole genome; and genetic simulations.
Validating sub-national statistical typologies, re-coding across standard typologies of sub-national statistics, and making valid aggregate level imputation, re-aggregation, re-weighting and projection down to lower hierarchical levels to create meaningful data panels and time series.
Make your workflow faster and easier. Easily customizable plots (via ggplot2'), nice APA tables (following the style of the *American Psychological Association*) exportable to Word (via flextable'), easily run statistical tests or check assumptions, and automatize various other tasks.
Retrieve air monitoring data and associated metadata from the US Environmental Protection Agency's Air Quality System service using functions. See <https://aqs.epa.gov/aqsweb/documents/data_api.html> for details about the US EPA Data Mart API.
This package performs multinomial goodness-of-fit test on multinomially distributed data using the Randomized phi-divergence test statistics. Details of this kind of statistics can be found at Nikita Puchkin, Vladimir Ulyanov (2023) <doi:10.1214/22-AIHP1299>.
Ports the Ripser <doi:10.48550/arXiv.1908.02518>
and Cubical Ripser <doi:10.48550/arXiv.2005.12692>
persistent homology calculation engines from C++. Can be used as a rapid calculation tool in topological data analysis pipelines.
This package provides a function to plot a regression nomogram of regression objects. Covariate distributions are superimposed on nomogram scales and the plot can be animated to allow on-the-fly changes to distribution representation and to enable outcome calculation.
This package creates reports from Trello, a collaborative, project organization and list-making application. <https://trello.com/> Reports are created by comparing individual Trello board cards from two different points in time and documenting any changes made to the cards.
Efficient diffusing of content across function documentations. Sections, parameters or dot parameters are extracted from function documentations and turned into valid Rd character strings, which are ready to diffuse into the roxygen comments of another function by inserting inline code.
This package provides a crate for SASL authentication. Currently only does the client side
Produce bridge hands, allowing parameters for hands to offer specific for bidding sequences.
Fit two-regime threshold autoregressive (TAR) models by Markov chain Monte Carlo methods.
Allows for forward-in-time simulation of epistatic networks with associated phenotypic output.
This package provides a light, simple tool for sending emails with minimal dependencies.
Generation of bioclimatic rasters that are complementary to the typical 19 bioclim variables.
Exports flextable objects to xlsx files, utilizing functionalities provided by flextable and openxlsx2'.
Supports image files and graphic objects to be visualized in ggplot2 graphic system.
R Interface to C API of GLPK, depends on GLPK Version >= 4.42.
Convert a html document to plain texts by stripping off all html tags.
First- and higher-order likelihood inference in meta-analysis and meta-regression models.
Interactive shiny application for working with Probability Distributions. Calculations and Graphs are provided.
Interface to sigma.js graph visualization library including animations, plugins and shiny proxies.
This package provides data from the United Nation's World Population Prospects 2017.
This package provides data from the United Nation's World Population Prospects 2019.