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redox 0.3
Propagated dependencies: libev@4.33 hiredis@1.1.0
Channel: guix-hpc
Location: guix-hpc/packages/utils.scm (guix-hpc packages utils)
Home page: https://github.com/mpoquet/redox
Licenses: ASL 2.0
Synopsis: Modern, asynchronous, and wicked fast C++11 client for Redis
Description:

Redox is a C++ interface to the Redis key-value store that makes it easy to write applications that are both elegant and high-performance. Communication should be a means to an end, not something we spend a lot of time worrying about. Redox takes care of the details so you can move on to the interesting part of your project.

r-bws 0.1.0
Propagated dependencies: r-stanheaders@2.32.10 r-rstantools@2.4.0 r-rstan@2.32.7 r-rcppparallel@5.1.10 r-rcppeigen@0.3.4.0.2 r-rcpp@1.0.14 r-bh@1.87.0-1
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://cran.r-project.org/package=bws
Licenses: GPL 2+
Synopsis: Bayesian Weighted Sums
Description:

An interface to the Bayesian Weighted Sums model implemented in RStan'. It estimates the summed effect of multiple, often moderately to highly correlated, continuous predictors. Its applications can be found in analysis of exposure mixtures. The model was proposed by Hamra, Maclehose, Croen, Kauffman, and Newschaffer (2021) <doi:10.3390/ijerph18041373>. This implementation includes an extension to model binary outcome.

r-der 1.1
Propagated dependencies: r-rfast2@0.1.5.4 r-rfast@2.1.5.1
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://cran.r-project.org/package=DER
Licenses: GPL 2+
Synopsis: Income Polarization Index
Description:

The DER (or PaF) income polarization index as proposed by Duclos J. Y., Esteban, J. and Ray D. (2004). "Polarization: concepts, measurement, estimation". Econometrica, 72(6): 1737--1772. <doi:10.1111/j.1468-0262.2004.00552.x>. The index may be computed for a single or for a range of values of the alpha-parameter. Bootstrapping is also available.

r-dde 1.0.7
Propagated dependencies: r-ring@1.0.6
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://github.com/mrc-ide/dde
Licenses: Expat
Synopsis: Solve Delay Differential Equations
Description:

Solves ordinary and delay differential equations, where the objective function is written in either R or C. Suitable only for non-stiff equations, the solver uses a Dormand-Prince method that allows interpolation of the solution at any point. This approach is as described by Hairer, Norsett and Wanner (1993) <ISBN:3540604529>. Support is also included for iterating difference equations.

r-esg 1.3
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://cran.r-project.org/package=ESG
Licenses: GPL 2+
Synopsis: Package for Asset Projection
Description:

Presents a "Scenarios" class containing general parameters, risk parameters and projection results. Risk parameters are gathered together into a ParamsScenarios sub-object. The general process for using this package is to set all needed parameters in a Scenarios object, use the customPathsGeneration method to proceed to the projection, then use xxx_PriceDistribution() methods to get asset prices.

r-fwb 0.3.0
Propagated dependencies: r-rlang@1.1.6 r-pbapply@1.7-2 r-chk@0.10.0
Channel: guix-cran
Location: guix-cran/packages/f.scm (guix-cran packages f)
Home page: https://github.com/ngreifer/fwb
Licenses: GPL 2+
Synopsis: Fractional Weighted Bootstrap
Description:

An implementation of the fractional weighted bootstrap to be used as a drop-in for functions in the boot package. The fractional weighted bootstrap (also known as the Bayesian bootstrap) involves drawing weights randomly that are applied to the data rather than resampling units from the data. See Xu et al. (2020) <doi:10.1080/00031305.2020.1731599> for details.

r-fmm 0.4.1
Propagated dependencies: r-rlang@1.1.6 r-iterators@1.0.14 r-gsignal@0.3-7 r-foreach@1.5.2 r-doparallel@1.0.17
Channel: guix-cran
Location: guix-cran/packages/f.scm (guix-cran packages f)
Home page: https://github.com/FMMGroupVa/FMM-base-R-package
Licenses: GPL 2+
Synopsis: Rhythmic Patterns Modeling by FMM Models
Description:

This package provides a collection of functions to fit and explore single, multi-component and restricted Frequency Modulated Moebius (FMM) models. FMM is a nonlinear parametric regression model capable of fitting non-sinusoidal shapes in rhythmic patterns. Details about the mathematical formulation of FMM models can be found in Rueda et al. (2019) <doi:10.1038/s41598-019-54569-1>.

r-grc 0.5.1
Propagated dependencies: r-rcpparmadillo@14.4.2-1 r-rcpp@1.0.14 r-mass@7.3-65 r-igraph@2.1.4 r-grbase@2.0.3
Channel: guix-cran
Location: guix-cran/packages/g.scm (guix-cran packages g)
Home page: https://people.math.aau.dk/~sorenh/software/gR/
Licenses: GPL 2+ GPL 3+
Synopsis: Inference in Graphical Gaussian Models with Edge and Vertex Symmetries
Description:

Estimation, model selection and other aspects of statistical inference in Graphical Gaussian models with edge and vertex symmetries (Graphical Gaussian models with colours). Documentation about gRc is provided in the paper by Hojsgaard and Lauritzen (2007, <doi:10.18637/jss.v023.i06>) and the paper by Hojsgaard and Lauritzen (2008, <doi:10.1111/j.1467-9868.2008.00666.x>).

r-gpp 0.1
Propagated dependencies: r-rstan@2.32.7
Channel: guix-cran
Location: guix-cran/packages/g.scm (guix-cran packages g)
Home page: https://cran.r-project.org/package=GPP
Licenses: GPL 2+
Synopsis: Gaussian Process Projection
Description:

Estimates a counterfactual using Gaussian process projection. It takes a dataframe, creates missingness in the desired outcome variable and estimates counterfactual values based on all information in the dataframe. The package writes Stan code, checks it for convergence and adds artificial noise to prevent overfitting and returns a plot of actual values and estimated counterfactual values using r-base plot.

r-lpl 0.12
Propagated dependencies: r-survival@3.8-3 r-mass@7.3-65
Channel: guix-cran
Location: guix-cran/packages/l.scm (guix-cran packages l)
Home page: https://cran.r-project.org/package=lpl
Licenses: GPL 2
Synopsis: Local Partial Likelihood Estimation and Simultaneous Confidence Band
Description:

Local partial likelihood estimation by Fan, Lin and Zhou(2006)<doi:10.1214/009053605000000796> and simultaneous confidence band is a set of tools to test the covariates-biomarker interaction for survival data. Test for the covariates-biomarker interaction using the bootstrap method and the asymptotic method with simultaneous confidence band (Liu, Jiang and Chen (2015)<doi:10.1002/sim.6563>).

r-lsx 1.4.4
Propagated dependencies: r-stringi@1.8.7 r-rspectra@0.16-2 r-reshape2@1.4.4 r-quanteda-textstats@0.97.2 r-quanteda@4.2.0 r-proxyc@0.5.2 r-matrix@1.7-3 r-locfit@1.5-9.12 r-ggrepel@0.9.6 r-ggplot2@3.5.2 r-digest@0.6.37
Channel: guix-cran
Location: guix-cran/packages/l.scm (guix-cran packages l)
Home page: https://koheiw.github.io/LSX/
Licenses: GPL 3
Synopsis: Semi-Supervised Algorithm for Document Scaling
Description:

This package provides a word embeddings-based semi-supervised model for document scaling Watanabe (2020) <doi:10.1080/19312458.2020.1832976>. LSS allows users to analyze large and complex corpora on arbitrary dimensions with seed words exploiting efficiency of word embeddings (SVD, Glove). It can generate word vectors on a users-provided corpus or incorporate a pre-trained word vectors.

r-lcc 1.1.4
Propagated dependencies: r-nlme@3.1-168 r-hnp@1.2-7 r-ggplot2@3.5.2 r-foreach@1.5.2 r-dosnow@1.0.20 r-dorng@1.8.6.2
Channel: guix-cran
Location: guix-cran/packages/l.scm (guix-cran packages l)
Home page: https://cran.r-project.org/package=lcc
Licenses: GPL 2+
Synopsis: Longitudinal Concordance Correlation
Description:

Estimates the longitudinal concordance correlation to access the longitudinal agreement profile. The estimation approach implemented is variance components approach based on polynomial mixed effects regression model, as proposed by Oliveira, Hinde and Zocchi (2018) <doi:10.1007/s13253-018-0321-1>. In addition, non-parametric confidence intervals were implemented using percentile method or normal-approximation based on Fisher Z-transformation.

r-mvs 2.1.0
Propagated dependencies: r-randomforest@4.7-1.2 r-glmnet@4.1-8 r-foreach@1.5.2
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://cran.r-project.org/package=mvs
Licenses: GPL 2
Synopsis: Methods for High-Dimensional Multi-View Learning
Description:

This package provides methods for high-dimensional multi-view learning based on the multi-view stacking (MVS) framework. For technical details on the MVS and stacked penalized logistic regression (StaPLR) methods see Van Loon, Fokkema, Szabo, & De Rooij (2020) <doi:10.1016/j.inffus.2020.03.007> and Van Loon et al. (2022) <doi:10.3389/fnins.2022.830630>.

r-ncc 1.0
Propagated dependencies: r-spamm@4.5.0 r-rlang@1.1.6 r-rjags@4-17 r-rbest@1.8-2 r-parallelly@1.44.0 r-mgcv@1.9-3 r-magick@2.8.6 r-lmertest@3.1-3 r-iterators@1.0.14 r-ggplot2@3.5.2 r-foreach@1.5.2 r-doparallel@1.0.17
Channel: guix-cran
Location: guix-cran/packages/n.scm (guix-cran packages n)
Home page: https://pavlakrotka.github.io/NCC/
Licenses: Expat
Synopsis: Simulation and Analysis of Platform Trials with Non-Concurrent Controls
Description:

Design and analysis of flexible platform trials with non-concurrent controls. Functions for data generation, analysis, visualization and running simulation studies are provided. The implemented analysis methods are described in: Bofill Roig et al. (2022) <doi:10.1186/s12874-022-01683-w>, Saville et al. (2022) <doi:10.1177/17407745221112013> and Schmidli et al. (2014) <doi:10.1111/biom.12242>.

r-sft 2.4
Propagated dependencies: r-suppdists@1.1-9.9 r-fda@6.2.0
Channel: guix-cran
Location: guix-cran/packages/s.scm (guix-cran packages s)
Home page: https://cran.r-project.org/package=sft
Licenses: GPL 2+
Synopsis: Functions for Systems Factorial Technology Analysis of Data
Description:

This package provides a series of tools for analyzing Systems Factorial Technology data. This includes functions for plotting and statistically testing capacity coefficient functions and survivor interaction contrast functions. Houpt, Blaha, McIntire, Havig, and Townsend (2013) <doi:10.3758/s13428-013-0377-3> provide a basic introduction to Systems Factorial Technology along with examples using the sft R package.

r-ypr 0.6.0
Propagated dependencies: r-yesno@0.1.3 r-tidyplus@0.2.0 r-tibble@3.2.1 r-purrr@1.0.4 r-lifecycle@1.0.4 r-ggplot2@3.5.2 r-chk@0.10.0
Channel: guix-cran
Location: guix-cran/packages/y.scm (guix-cran packages y)
Home page: https://github.com/poissonconsulting/ypr
Licenses: Expat
Synopsis: Yield Per Recruit
Description:

An implementation of equilibrium-based yield per recruit methods. Yield per recruit methods can used to estimate the optimal yield for a fish population as described by Walters and Martell (2004) <isbn:0-691-11544-3>. The yield can be based on the number of fish caught (or harvested) or biomass caught for all fish or just large (trophy) individuals.

r-som 0.3-5.2
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/package=som
Licenses: GPL 3+
Synopsis: Self-organizing map
Description:

This package implements a self-organizing map which has application in gene clustering. It provides functions like:

  • filtering data by certain floor, ceiling, max/min ratio, and max - min difference;

  • normalization of the data;

  • get the average distortion measure;

  • train a self-organizing map;

  • summarize a som object;

  • yeast cell cycle.

r-scs 3.2.7
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/FlorianSchwendinger/scs
Licenses: GPL 3
Synopsis: Splitting conic solver
Description:

This package solves convex cone programs via operator splitting. It can solve: linear programs, second-order cone programs, semidefinite programs, exponential cone programs, and power cone programs, or problems with any combination of those cones. SCS uses AMD (a set of routines for permuting sparse matrices prior to factorization) and LDL (a sparse LDL factorization and solve package) from SuiteSparse.

r-rct 1.2
Propagated dependencies: r-tidyselect@1.2.1 r-tidyr@1.3.1 r-stringr@1.5.1 r-rlang@1.1.6 r-purrr@1.0.4 r-pracma@2.4.4 r-mass@7.3-65 r-magrittr@2.0.3 r-glue@1.8.0 r-ggplot2@3.5.2 r-forcats@1.0.0 r-estimatr@1.0.6 r-dplyr@1.1.4 r-broom@1.0.8
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=RCT
Licenses: GPL 2
Synopsis: Assign Treatments, Power Calculations, Balances, Impact Evaluation of Experiments
Description:

Assists in the whole process of designing and evaluating Randomized Control Trials. Robust treatment assignment by strata/blocks, that handles misfits; Power calculations of the minimum detectable treatment effect or minimum populations; Balance tables of T-test of covariates; Balance Regression: (treatment ~ all x variables) with F-test of null model; Impact_evaluation: Impact evaluation regressions. This function gives you the option to include control_vars, fixed effect variables, cluster variables (for robust SE), multiple endogenous variables and multiple heterogeneous variables (to test treatment effect heterogeneity) summary_statistics: Function that creates a summary statistics table with statistics rank observations in n groups: Creates a factor variable with n groups. Each group has a min and max label attach to each category. Athey, Susan, and Guido W. Imbens (2017) <arXiv:1607.00698>.

r-adw 0.4.0
Propagated dependencies: r-terra@1.8-50 r-sf@1.0-21 r-cnmap@0.1.0
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://github.com/PanfengZhang/adw
Licenses: GPL 3
Synopsis: Angular Distance Weighting Interpolation
Description:

The irregularly-spaced data are interpolated onto regular latitude-longitude grids by weighting each station according to its distance and angle from the center of a search radius. In addition to this, we also provide a simple way (Jones and Hulme, 1996) to grid the irregularly-spaced data points onto regular latitude-longitude grids by averaging all stations in grid-boxes.

r-aep 0.1.4
Channel: guix-cran
Location: guix-cran/packages/a.scm (guix-cran packages a)
Home page: https://cran.r-project.org/package=AEP
Licenses: GPL 2+
Synopsis: Statistical Modelling for Asymmetric Exponential Power Distribution
Description:

Developed for Computing the probability density function, cumulative distribution function, random generation, estimating the parameters of asymmetric exponential power distribution, and robust regression analysis with error term that follows asymmetric exponential power distribution. The asymmetric exponential power distribution studied here is a special case of that introduced by Dongming and Zinde-Walsh (2009) <doi:10.1016/j.jeconom.2008.09.038>.

r-dwp 1.1
Propagated dependencies: r-vgam@1.1-13 r-statmod@1.5.0 r-sf@1.0-21 r-pracma@2.4.4 r-plotrix@3.8-4 r-numderiv@2016.8-1.1 r-mvtnorm@1.3-3 r-matrixstats@1.5.0 r-mass@7.3-65 r-magrittr@2.0.3 r-invgamma@1.1 r-gtools@3.9.5 r-genest@1.4.9 r-expint@0.1-8 r-boot@1.3-31
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://cran.r-project.org/package=dwp
Licenses: CC0
Synopsis: Density-Weighted Proportion
Description:

Fit a Poisson regression to carcass distance data and integrate over the searched area at a wind farm to estimate the fraction of carcasses falling in the searched area and format the output for use as the dwp parameter in the GenEst or eoa package for estimating bird and bat mortality, following Dalthorp, et al. (2022) <arXiv:2201.10064>.

r-eha 2.11.5
Propagated dependencies: r-survival@3.8-3
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://ehar.se/r/eha/
Licenses: GPL 2+
Synopsis: Event History Analysis
Description:

Parametric proportional hazards fitting with left truncation and right censoring for common families of distributions, piecewise constant hazards, and discrete models. Parametric accelerated failure time models for left truncated and right censored data. Proportional hazards models for tabular and register data. Sampling of risk sets in Cox regression, selections in the Lexis diagram, bootstrapping. Broström (2022) <doi:10.1201/9780429503764>.

r-etl 0.4.1
Propagated dependencies: r-xml2@1.3.8 r-usethis@3.1.0 r-tibble@3.2.1 r-rvest@1.0.4 r-rlang@1.1.6 r-readr@2.1.5 r-lubridate@1.9.4 r-janitor@2.2.1 r-fs@1.6.6 r-dplyr@1.1.4 r-downloader@0.4.1 r-dbplyr@2.5.0 r-dbi@1.2.3
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://github.com/beanumber/etl
Licenses: CC0
Synopsis: Extract-Transform-Load Framework for Medium Data
Description:

This package provides a predictable and pipeable framework for performing ETL (extract-transform-load) operations on publicly-accessible medium-sized data set. This package sets up the method structure and implements generic functions. Packages that depend on this package download specific data sets from the Internet, clean them up, and import them into a local or remote relational database management system.

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