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/_/ /      / / /____\/ /       \ \_\\ \/___/ /
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r-prindt 2.0.2
Propagated dependencies: r-stringr@1.6.0 r-splitstackshape@1.4.8 r-party@1.3-18 r-mass@7.3-65 r-gdata@3.0.1
Channel: guix-cran
Location: guix-cran/packages/p.scm (guix-cran packages p)
Home page: https://cran.r-project.org/package=PrInDT
Licenses: GPL 2
Build system: r
Synopsis: Prediction and Interpretation in Decision Trees for Classification and Regression
Description:

Optimization of conditional inference trees from the package party for classification and regression. For optimization, the model space is searched for the best tree on the full sample by means of repeated subsampling. Restrictions are allowed so that only trees are accepted which do not include pre-specified uninterpretable split results (cf. Weihs & Buschfeld, 2021a). The function PrInDT() represents the basic resampling loop for 2-class classification (cf. Weihs & Buschfeld, 2021a). The function RePrInDT() (repeated PrInDT()) allows for repeated applications of PrInDT() for different percentages of the observations of the large and the small classes (cf. Weihs & Buschfeld, 2021c). The function NesPrInDT() (nested PrInDT()) allows for an extra layer of subsampling for a specific factor variable (cf. Weihs & Buschfeld, 2021b). The functions PrInDTMulev() and PrInDTMulab() deal with multilevel and multilabel classification. In addition to these PrInDT() variants for classification, the function PrInDTreg() has been developed for regression problems. Finally, the function PostPrInDT() allows for a posterior analysis of the distribution of a specified variable in the terminal nodes of a given tree. In version 2, additionally structured sampling is implemented in functions PrInDTCstruc() and PrInDTRstruc(). In these functions, repeated measurements data can be analyzed, too. Moreover, multilabel 2-stage versions of classification and regression trees are implemented in functions C2SPrInDT() and R2SPrInDT() as well as interdependent multilabel models in functions SimCPrInDT() and SimRPrInDT(). Finally, for mixtures of classification and regression models functions Mix2SPrInDT() and SimMixPrInDT() are implemented. Most of these extensions of PrInDT are described in Buschfeld & Weihs (2025Fc). References: -- Buschfeld, S., Weihs, C. (2025Fc) "Optimizing decision trees for the analysis of World Englishes and sociolinguistic data", Cambridge Elements. -- Weihs, C., Buschfeld, S. (2021a) "Combining Prediction and Interpretation in Decision Trees (PrInDT) - a Linguistic Example" <doi:10.48550/arXiv.2103.02336>; -- Weihs, C., Buschfeld, S. (2021b) "NesPrInDT: Nested undersampling in PrInDT" <doi:10.48550/arXiv.2103.14931>; -- Weihs, C., Buschfeld, S. (2021c) "Repeated undersampling in PrInDT (RePrInDT): Variation in undersampling and prediction, and ranking of predictors in ensembles" <doi:10.48550/arXiv.2108.05129>.

r-meerva 0.2-2
Propagated dependencies: r-tidyr@1.3.1 r-survival@3.8-3 r-mvtnorm@1.3-3 r-matrixcalc@1.0-6 r-ggplot2@4.0.1 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/m.scm (guix-cran packages m)
Home page: https://cran.r-project.org/package=meerva
Licenses: GPL 3
Build system: r
Synopsis: Analysis of Data with Measurement Error Using a Validation Subsample
Description:

Sometimes data for analysis are obtained using more convenient or less expensive means yielding "surrogate" variables for what could be obtained more accurately, albeit with less convenience; or less conveniently or at more expense yielding "reference" variables, thought of as being measured without error. Analysis of the surrogate variables measured with error generally yields biased estimates when the objective is to make inference about the reference variables. Often it is thought that ignoring the measurement error in surrogate variables only biases effects toward the null hypothesis, but this need not be the case. Measurement errors may bias parameter estimates either toward or away from the null hypothesis. If one has a data set with surrogate variable data from the full sample, and also reference variable data from a randomly selected subsample, then one can assess the bias introduced by measurement error in parameter estimation, and use this information to derive improved estimates based upon all available data. Formulaically these estimates based upon the reference variables from the validation subsample combined with the surrogate variables from the whole sample can be interpreted as starting with the estimate from reference variables in the validation subsample, and "augmenting" this with additional information from the surrogate variables. This suggests the term "augmented" estimate. The meerva package calculates these augmented estimates in the regression setting when there is a randomly selected subsample with both surrogate and reference variables. Measurement errors may be differential or non-differential, in any or all predictors (simultaneously) as well as outcome. The augmented estimates derive, in part, from the multivariate correlation between regression model parameter estimates from the reference variables and the surrogate variables, both from the validation subset. Because the validation subsample is chosen at random any biases imposed by measurement error, whether non-differential or differential, are reflected in this correlation and these correlations can be used to derive estimates for the reference variables using data from the whole sample. The main functions in the package are meerva.fit which calculates estimates for a dataset, and meerva.sim.block which simulates multiple datasets as described by the user, and analyzes these datasets, storing the regression coefficient estimates for inspection. The augmented estimates, as well as how measurement error may arise in practice, is described in more detail by Kremers WK (2021) <arXiv:2106.14063> and is an extension of the works by Chen Y-H, Chen H. (2000) <doi:10.1111/1467-9868.00243>, Chen Y-H. (2002) <doi:10.1111/1467-9868.00324>, Wang X, Wang Q (2015) <doi:10.1016/j.jmva.2015.05.017> and Tong J, Huang J, Chubak J, et al. (2020) <doi:10.1093/jamia/ocz180>.

r-readhac 1.0
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/kaskr/HAC
Licenses: GPL 2
Build system: r
Synopsis: Read Acoustic HAC Format
Description:

Read Acoustic HAC format.

r-rgenoud 5.9-0.11
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://github.com/JasjeetSekhon/rgenoud
Licenses: GPL 3
Build system: r
Synopsis: R version of genetic optimization using derivatives
Description:

This package provides a genetic algorithm plus derivative optimizer.

rust-ring 0.17.8
Channel: guix
Location: gnu/packages/rust-sources.scm (gnu packages rust-sources)
Home page: https://github.com/briansmith/ring
Licenses: ISC OpenSSL
Build system: cargo
Synopsis: Safe, fast, small crypto using Rust
Description:

This package provided safe, fast, small crypto using Rust.

r-pd-rice 3.12.0
Channel: guix-bioc
Location: guix-bioc/packages/p.scm (guix-bioc packages p)
Home page: https://bioconductor.org/packages/pd.rice
Licenses: Artistic License 2.0
Build system: r
Synopsis: Platform Design Info for The Manufacturer's Name Rice
Description:

Platform Design Info for The Manufacturer's Name Rice.

ruby-rotp 6.2.0
Channel: gn-bioinformatics
Location: gn/packages/ruby.scm (gn packages ruby)
Home page: https://github.com/mdp/rotp
Licenses: Expat
Build system: ruby
Synopsis: Works for both HOTP and TOTP, and includes QR Code provisioning
Description:

Works for both HOTP and TOTP, and includes QR Code provisioning

r-rmgarch 1.4-2
Propagated dependencies: r-zoo@1.8-14 r-xts@0.14.1 r-spd@2.0-1 r-shape@1.4.6.1 r-rugarch@1.5-5 r-rsolnp@2.0.1 r-rcpparmadillo@15.2.2-1 r-rcpp@1.1.0 r-pcapp@2.0-5 r-matrix@1.7-4 r-mass@7.3-65 r-ff@4.5.2 r-corpcor@1.6.10 r-bessel@0.7-0
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/alexiosg/rmgarch
Licenses: GPL 3
Build system: r
Synopsis: Multivariate GARCH Models
Description:

Feasible multivariate GARCH models including DCC, GO-GARCH and Copula-GARCH.

r-rblpapi 0.3.16
Propagated dependencies: r-rcpp@1.1.0 r-bh@1.87.0-1
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://dirk.eddelbuettel.com/code/rblpapi.html
Licenses: FSDG-compatible
Build system: r
Synopsis: R Interface to 'Bloomberg'
Description:

An R Interface to Bloomberg is provided via the Blp API'.

r-r-utils 2.13.0
Propagated dependencies: r-r-methodss3@1.8.2 r-r-oo@1.27.1
Channel: guix
Location: gnu/packages/statistics.scm (gnu packages statistics)
Home page: https://github.com/HenrikBengtsson/R.utils
Licenses: LGPL 2.1+
Build system: r
Synopsis: Various programming utilities
Description:

This package provides utility functions useful when programming and developing R packages.

r-resumer 0.0.5
Propagated dependencies: r-useful@1.2.6.1 r-rmarkdown@2.30 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/jaredlander/resumer
Licenses: Modified BSD
Build system: r
Synopsis: Build Resumes with R
Description:

Using a CSV, LaTeX and R to easily build attractive resumes.

r-randvar 1.2.5
Propagated dependencies: r-startupmsg@1.0.0 r-distrex@2.9.6 r-distr@2.9.7
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://r-forge.r-project.org/projects/robast/
Licenses: LGPL 3
Build system: r
Synopsis: Implementation of Random Variables
Description:

This package implements random variables by means of S4 classes and methods.

r-rgroovy 1.3
Dependencies: openjdk@25
Propagated dependencies: r-rjava@1.0-11
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: http://groovy-lang.org/
Licenses: LGPL 3
Build system: r
Synopsis: Groovy Language Integration
Description:

Integrates the Groovy scripting language with the R Project for Statistical Computing.

r-rafalib 1.0.4
Propagated dependencies: r-biocmanager@1.30.27 r-rcolorbrewer@1.1-3
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/package=rafalib
Licenses: Artistic License 2.0
Build system: r
Synopsis: Convenience functions for routine data exploration
Description:

This package provides a series of shortcuts for routine tasks to facilitate data exploration.

r-ricecdf 2.18.0
Propagated dependencies: r-annotationdbi@1.72.0
Channel: guix-bioc
Location: guix-bioc/packages/r.scm (guix-bioc packages r)
Home page: https://bioconductor.org/packages/ricecdf
Licenses: LGPL 2.0+
Build system: r
Synopsis: ricecdf
Description:

This package provides a package containing an environment representing the Rice.cdf file.

r-jds-rmd 0.3.4
Propagated dependencies: r-rmarkdown@2.30 r-bookdown@0.45
Channel: guix-cran
Location: guix-cran/packages/j.scm (guix-cran packages j)
Home page: https://github.com/wenjie2wang/jds.rmd
Licenses: GPL 3+
Build system: r
Synopsis: R Markdown Templates for Journal of Data Science
Description:

Customized R Markdown templates for authoring articles for Journal of Data Science.

r-rollbar 0.1.0
Propagated dependencies: r-httr@1.4.7
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=rollbar
Licenses: Expat
Build system: r
Synopsis: Error Tracking and Logging
Description:

Reports errors and messages to Rollbar, the error tracking platform <https://rollbar.com>.

r-r2mlwin 0.8-10
Propagated dependencies: r-tibble@3.3.0 r-texreg@1.39.5 r-memisc@0.99.31.8.3 r-matrix@1.7-4 r-lattice@0.22-7 r-foreign@0.8-90 r-foreach@1.5.2 r-doparallel@1.0.17 r-digest@0.6.39 r-coda@0.19-4.1 r-broom@1.0.10
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://www.bristol.ac.uk/cmm/software/r2mlwin/
Licenses: GPL 2+
Build system: r
Synopsis: Running 'MLwiN' from Within R
Description:

An R command interface to the MLwiN multilevel modelling software package.

r-records 1.0
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://cran.r-project.org/package=Records
Licenses: GPL 2+
Build system: r
Synopsis: Record Values and Record Times
Description:

This package provides functions for generating k-record values and k-record times.

r-rstream 1.3.7
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://statmath.wu.ac.at/arvag/
Licenses: GPL 2
Build system: r
Synopsis: Streams of Random Numbers
Description:

Unified object oriented interface for multiple independent streams of random numbers from different sources.

r-rnbeads 2.28.0
Dependencies: kentutils@302.0.0
Propagated dependencies: r-biocgenerics@0.56.0 r-cluster@2.1.8.1 r-ff@4.5.2 r-fields@17.1 r-genomicranges@1.62.0 r-ggplot2@4.0.1 r-gplots@3.2.0 r-gridextra@2.3 r-illuminaio@0.52.0 r-iranges@2.44.0 r-limma@3.66.0 r-mass@7.3-65 r-matrixstats@1.5.0 r-methylumi@2.56.0 r-plyr@1.8.9 r-reshape2@1.4.5 r-s4vectors@0.48.0
Channel: guix
Location: gnu/packages/bioconductor.scm (gnu packages bioconductor)
Home page: https://bioconductor.org/packages/RnBeads
Licenses: GPL 3
Build system: r
Synopsis: RnBeads
Description:

RnBeads facilitates comprehensive analysis of various types of DNA methylation data at the genome scale.

ruby-rake 13.3.0
Channel: guix
Location: gnu/packages/ruby-check.scm (gnu packages ruby-check)
Home page: https://github.com/ruby/rake
Licenses: Expat
Build system: ruby
Synopsis: Rake is a Make-like program implemented in Ruby
Description:

Rake is a Make-like program where tasks and dependencies are specified in standard Ruby syntax.

r-resmush 1.0.0
Propagated dependencies: r-httr2@1.2.1 r-curl@7.0.0 r-cli@3.6.5
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://dieghernan.github.io/resmush/
Licenses: Expat
Build system: r
Synopsis: Optimize and Compress Image Files with 'reSmush.it'
Description:

Compress local and online images using the reSmush.it API service <https://resmush.it/>.

r-rdracor 1.0.6
Propagated dependencies: r-xml2@1.5.0 r-tidyr@1.3.1 r-tibble@3.3.0 r-stringr@1.6.0 r-rdpack@2.6.4 r-purrr@1.2.0 r-jsonlite@2.0.0 r-igraph@2.2.1 r-httr@1.4.7 r-data-table@1.17.8
Channel: guix-cran
Location: guix-cran/packages/r.scm (guix-cran packages r)
Home page: https://github.com/dracor-org/rdracor
Licenses: GPL 3+
Build system: r
Synopsis: Access to the 'DraCor' API
Description:

Provide an interface for Drama Corpora Project ('DraCor') API: <https://dracor.org/documentation/api>.

Total packages: 31019