This package provides a library for the analysis of networks and graphs. It can handle large graphs very well and provides functions for generating random and regular graphs, graph visualization, centrality methods and much more.

This is a module for handling LDAP operations in Python. LDAP entries are mapped to a special Python case-insensitive dictionary, tracking the changes of the dictionary to modify the entry on the server easily.

Daemux lets you run daemons in a tmux pane. Users can launch long-running background tasks, and check these tasks' health by hand, relaunch them, etc., by attaching to the corresponding pane in tmux.

pysiaf is a python package to access, interpret, maintain, and generate Handling of Science Instrument Aperture Files, in particular for JWST. Tools for applying the frame transformations, plotting, comparison, and validation are provided.

pynrrd is a Python module for reading and writing NRRD files (format designed to support scientific visualization and image processing involving N-dimensional raster data) into and from numpy arrays.

With apipkg you can control the exported namespace of a Python package and greatly reduce the number of imports for your users. It is a small pure Python module that works on virtually all Python versions.

python-schema is a library for validating Python data structures, such as those obtained from config-files, forms, external services or command-line parsing, converted from JSON/YAML (or something else) to Python data-types.

Mellon is a non-parametric cell-state density estimator based on a nearest-neighbors-distance distribution. It uses a sparse gaussian process to produce a differntiable density function that can be evaluated out of sample.

Pylama is a code audit tool for Python and JavaScript to check for style, syntax and other code health metrics. It is essentially a convenient wrapper above tools such as Pyflakes, pydocstyle, pycodestyle and McCabe, among others.

A Python wrapper for the dialog utility. Its purpose is to provide an easy to use, pythonic and comprehensive Python interface to dialog. This allows one to make simple text-mode user interfaces on Unix-like systems

This package provides a way to write Shell commands from within Python. Python functions can be chained together to process input Bash control characters are escapted so that parameters can be passed without worrying about command injection.

PyLops is an open-source Python library focused on providing a backend-agnostic, idiomatic, matrix-free library of linear operators and related computations. It is inspired by the iconic MATLAB Spot – A Linear-Operator Toolbox project.

Pyppmd provides classes and functions for compressing and decompressing text data, using the Prediction by partial matching (PPM) compression algorithm variation H and I.2. It provides an API similar to Python's zlib/bz2/lzma modules.

Plotly's Python graphing library makes interactive,publication-quality graphs online. Examples of how to make line plots, scatter plots, area charts, bar charts, error bars, box plots, histograms, heatmaps, subplots, multiple-axes, polar charts, and bubble charts.

This package contains a set of persistent object containers built around a modified BTree data structure. The trees are optimized for use inside ZODB's "optimistic concurrency" paradigm, and include explicit resolution of conflicts detected by that mechanism.

This package provides a tool for translation and localization of Python programs via modification of source files. Trubar supports f-strings and does not require any changes to the original source code, such as marking strings for translation.

python-future is the missing compatibility layer between Python 2 and Python 3. It allows you to use a single, clean Python 3.x-compatible codebase to support both Python 2 and Python 3 with minimal overhead.

The Enable project provides two related multi-platform packages for drawing GUI objects.

• Enable: an object drawing library that supports containment and event notification.

• Kiva: a multi-platform DisplayPDF vector drawing engine.

Plotly's Python graphing library makes interactive, publication-quality graphs online. Examples of how to make line plots, scatter plots, area charts, bar charts, error bars, box plots, histograms, heatmaps, subplots, multiple-axes, polar charts, and bubble charts.

Scanpy is a scalable toolkit for analyzing single-cell gene expression data. It includes preprocessing, visualization, clustering, pseudotime and trajectory inference and differential expression testing. The Python-based implementation efficiently deals with datasets of more than one million cells.

GSEApy is a Python/Rust implementation for GSEA and wrapper for Enrichr. GSEApy can be used for RNA-seq, ChIP-seq, Microarray data. It can be used for convenient GO enrichment and to produce publication quality figures in Python.

warcio is a Python library to read and write the WARC format commonly used in Web archives. It is designed for fast, low-level access to web archival content, oriented around a stream of WARC records rather than files.

cattrs is an Python library for structuring and unstructuring data. cattrs works best with attrs classes, dataclasses and the usual Python collections, but other kinds of classes can also be supported by manually registering converters.

Joblib is a set of tools to provide lightweight pipelining in Python. In particular, joblib offers: transparent disk-caching of the output values and lazy re-evaluation (memoize pattern), easy simple parallel computing logging and tracing of the execution.