Calculate rarefaction-based alpha- and beta-diversity. Offer parametric extrapolation to estimate the total expected species in a single community and the total expected shared species between two communities. Visualize the curve-fitting for these estimators.

Utilities for sparse signal recovery suitable for compressed sensing. L1, L2 and TV penalties, DFT basis matrix, simple sparse signal generator, mutual cumulative coherence between two matrices and examples, Lp complex norm, scaling back regression coefficients.

Processing and analysis of targeted sequencing data. The package provides a user-friendly interface for core VSEARCH (Rognes et al. (2016), <doi:10.7717/peerj.2584>) functions, in addition to tools for visualization and parameter tuning.

Ruby implementation of RFC 8152 CBOR Object Signing and Encryption (COSE)

This package provides tools for processing short read data from ChIPseq experiments.

This package provides a collection of software tools for calculating distance measures.

This package provides maximally selected rank statistics with several p-value approximations.

This package estimates the parameters in Dirichlet-Multinomial and computes log-likelihoods.

This is a package for visualizing data quality of partially accruing data.

This package provides functions relating to time series analysis and computational finance.

This package provides functions to re-arrange, extract, and work with distances.

This package provides a data frame to xlsx exporter based on libxlsxwriter.

This package computes the Kendall rank correlation and Mann-Kendall trend test.

This package provides basic I/O tools for streaming and data parsing.

rime-data provides the schema data of Rime Input Method Engine.

wlr-randr is a utility to manage outputs of a Wayland compositor.

Logic based ordinary differential equation (ODE) add-on to CellNOptR.

Integrated peak and differential caller, specifically designed for broad epigenomic signals.

Characterization of miRNAs and isomiRs, clustering and differential expression.

This package provides a platform for Operational Taxonomic Unit based analysis.

This package provides a package for processing protein mass spectrometry data.

This package provides a continuous date scale, omitting weekends and holidays.

The dynpred package contains functions for dynamic prediction in survival analysis.

This package creates testthat tests from roxygen examples using simple tags.