Download and install R packages stored in GitHub, BitBucket, or plain subversion or git repositories. This package is a lightweight replacement of the install_* functions in the devtools package. Indeed most of the code was copied over from devtools.

Predicting regulatory DNA elements based on epigenomic signatures. This package is more of a set of building blocks than a direct solution. REPTILE regulatory prediction pipeline is built on this R package. See <https://github.com/yupenghe/REPTILE> for more information.

Provide function for get data from YouTube Data API <https://developers.google.com/youtube/v3/docs/>, YouTube Analytics API <https://developers.google.com/youtube/analytics/reference/> and YouTube Reporting API <https://developers.google.com/youtube/reporting/v1/reports>.

This package provides functions to write messages to the syslog system logger API, available on all POSIX'-compatible operating systems. Features include tagging messages with a priority level and application type, as well as masking (hiding) messages below a given priority level.

An implementation of simulated maximum likelihood method for the estimation of Binary (Probit and Logit), Ordered (Probit and Logit) and Poisson models with random parameters for cross-sectional and longitudinal data as presented in Sarrias (2016) <doi:10.18637/jss.v074.i10>.

This package provides tools for representing and modeling data in the EMBL-EBI GWAS catalog.

This package provides functions to plot data associated with arbitrary genomic intervals along chromosomal ideogram.

This package provides basic plotting, data manipulation and processing of mass spectrometry based proteomics data.

This package provides a collection of functions to implement a class for univariate polynomial manipulations.

This package lets you expand factors, characters and other eligible classes into dummy/indicator variables.

Read and write feather files, a lightweight binary columnar data store designed for maximum speed.

Generate a colorized diff of two R objects for an intuitive visualization of their differences.

This package provides a helper that tests DBI back ends for conformity to the interface.

This package provides an implementation of scale functions for setting axis breaks of a ggplot.

This package provides lots of plotting, various labeling, axis and color scaling functions for R.

This package provides a renameat2 command that calls the Linux-specific renameat2 system call.

Slop provides a Ruby domain specific language for gathering options and parsing command line flags.

Slop provides a Ruby domain specific language for gathering options and parsing command line flags.

Nenv provides a convenient wrapper for Ruby's ENV to modify and inspect the environment.

This package provides a Ruby module that provides a two-phase lock with a counter.

Bump provides commands to manage Rubygem versioning, updating to the next patch version for example.

This package provides a collection of text algorithms: Levenshtein, Soundex, Metaphone, Double Metaphone, Porter Stemming.

Causal network analysis methods for regulator prediction and network reconstruction from genome scale data.

representation of public Iyer data from http://genome-www.stanford.edu/serum/clusters.html.