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r-motifrg 1.31.0
Propagated dependencies: r-biostrings@2.78.0 r-bsgenome@1.78.0 r-bsgenome-hsapiens-ucsc-hg19@1.4.3 r-iranges@2.44.0 r-seqlogo@1.76.0 r-xvector@0.50.0
Channel: guix
Location: gnu/packages/bioconductor.scm (gnu packages bioconductor)
Home page: https://bioconductor.org/packages/motifRG
Licenses: Artistic License 2.0
Synopsis: Discover motifs in high throughput sequencing data
Description:

This package provides tools for discriminative motif discovery in high throughput genetic sequencing data sets using regression methods.

r-biobase 2.70.0
Propagated dependencies: r-biocgenerics@0.56.0
Channel: guix
Location: gnu/packages/bioconductor.scm (gnu packages bioconductor)
Home page: https://bioconductor.org/packages/Biobase
Licenses: Artistic License 2.0
Synopsis: Base functions for Bioconductor
Description:

This package provides functions that are needed by many other packages on Bioconductor or which replace R functions.

r-treemap 2.4-4
Propagated dependencies: r-colorspace@2.1-2 r-data-table@1.17.8 r-ggplot2@4.0.1 r-gridbase@0.4-7 r-igraph@2.2.1 r-rcolorbrewer@1.1-3 r-shiny@1.11.1
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/package=treemap
Licenses: GPL 3+
Synopsis: Treemap visualization
Description:

A treemap is a space-filling visualization of hierarchical structures. This package offers great flexibility to draw treemaps.

r-precrec 0.14.5
Propagated dependencies: r-assertthat@0.2.1 r-data-table@1.17.8 r-ggplot2@4.0.1 r-gridextra@2.3 r-rcpp@1.1.0 r-rlang@1.1.6 r-withr@3.0.2
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://evalclass.github.io/precrec/
Licenses: GPL 3
Synopsis: Calculate accurate precision-recall and ROC curves
Description:

This package provides tools for accurate calculations and visualization of precision-recall and ROC (Receiver Operator Characteristics) curves.

r-mvabund 4.2.1
Propagated dependencies: r-mass@7.3-65 r-rcpp@1.1.0 r-rcppgsl@0.3.13 r-statmod@1.5.1 r-tweedie@2.3.5
Channel: guix
Location: gnu/packages/cran.scm (gnu packages cran)
Home page: https://cran.r-project.org/web/packages/mvabund/
Licenses: LGPL 2.1+
Synopsis: Statistical methods for analysing multivariate abundance data
Description:

This package provides a set of tools for displaying, modeling and analysing multivariate abundance data in community ecology.

ruby-grpc 1.74.1
Propagated dependencies: ruby-google-protobuf@3.25.3 ruby-googleapis-common-protos-types@1.13.0
Channel: guix
Location: gnu/packages/ruby-xyz.scm (gnu packages ruby-xyz)
Home page: https://github.com/grpc/grpc/tree/master/src/ruby
Licenses: ASL 2.0
Synopsis: GRPC system in Ruby
Description:

GRPC is a high performance, open-source universal RPC framework. This package provides a ruby interface for it.

r-sfsmisc 1.1-23
Propagated dependencies: procps@4.0.3
Channel: guix
Location: gnu/packages/statistics.scm (gnu packages statistics)
Home page: https://cran.r-project.org/web/packages/sfsmisc
Licenses: GPL 2+
Synopsis: Utilities from "Seminar fuer Statistik" ETH Zurich
Description:

This package provides useful utilities from Seminar fuer Statistik ETH Zurich, including many that are related to graphics.

r-miatime 1.0.0
Propagated dependencies: r-treesummarizedexperiment@2.18.0 r-tidyr@1.3.1 r-summarizedexperiment@1.40.0 r-singlecellexperiment@1.32.0 r-s4vectors@0.48.0 r-mia@1.18.0 r-dplyr@1.1.4
Channel: guix-bioc
Location: guix-bioc/packages/m.scm (guix-bioc packages m)
Home page: https://github.com/microbiome/miaTime
Licenses: Artistic License 2.0 FSDG-compatible
Synopsis: Microbiome Time Series Analysis
Description:

The `miaTime` package provides tools for microbiome time series analysis based on (Tree)SummarizedExperiment infrastructure.

r-sclcbam 1.42.0
Channel: guix-bioc
Location: guix-bioc/packages/s.scm (guix-bioc packages s)
Home page: https://bioconductor.org/packages/SCLCBam
Licenses: GPL 2
Synopsis: Sequence data from chromosome 4 of a small-cell lung tumor
Description:

Whole-exome sequencing data from a murine small-cell lung tumor; only contains data of chromosome 4.

r-bitrina 1.3.2
Propagated dependencies: r-diptest@0.77-2
Channel: guix-cran
Location: guix-cran/packages/b.scm (guix-cran packages b)
Home page: https://cran.r-project.org/package=BiTrinA
Licenses: Artistic License 2.0
Synopsis: Binarization and Trinarization of One-Dimensional Data
Description:

This package provides methods for the binarization and trinarization of one-dimensional data and some visualization functions.

r-cptcity 1.1.1
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://github.com/ibarraespinosa/cptcity
Licenses: GPL 3
Synopsis: 'cpt-city' Colour Gradients
Description:

Incorporates colour gradients from the cpt-city web archive available at <http://seaviewsensing.com/pub/cpt-city/>.

r-corplot 1.0.2
Propagated dependencies: r-vgam@1.1-13 r-knitr@1.50 r-ggplot2@4.0.1
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://github.com/Yongxi-Long/CORPlot
Licenses: Expat
Synopsis: Cumulative Odds Ratio Plot
Description:

Create cumulative odds ratio plot to visually inspect the proportional odds assumption from the proportional odds model.

r-choirbm 0.0.2
Propagated dependencies: r-stringr@1.6.0 r-rlang@1.1.6 r-ggplot2@4.0.1
Channel: guix-cran
Location: guix-cran/packages/c.scm (guix-cran packages c)
Home page: https://github.com/emcramer/CHOIRBM
Licenses: Expat
Synopsis: Plots the CHOIR Body Map
Description:

Collection of utility functions for visualizing body map data collected with the Collaborative Health Outcomes Information Registry.

r-designr 0.1.13
Propagated dependencies: r-tibble@3.3.0 r-mass@7.3-65 r-lme4@1.1-37 r-dplyr@1.1.4 r-crossdes@1.1-2
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://maxrabe.com/designr
Licenses: GPL 3
Synopsis: Balanced Factorial Designs
Description:

Generate balanced factorial designs with crossed and nested random and fixed effects <https://github.com/mmrabe/designr>.

r-doredis 3.0.3
Propagated dependencies: r-redux@1.1.5 r-iterators@1.0.14 r-foreach@1.5.2
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://cran.r-project.org/package=doRedis
Licenses: GPL 2
Synopsis: 'Foreach' Parallel Adapter Using the 'Redis' Database
Description:

Create and manage fault-tolerant task queues for the foreach package using the Redis key/value database.

r-details 0.4.0
Propagated dependencies: r-xfun@0.54 r-withr@3.0.2 r-png@0.1-8 r-knitr@1.50 r-httr@1.4.7 r-htmltools@0.5.8.1 r-desc@1.4.3 r-clipr@0.8.0
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://github.com/yonicd/details
Licenses: Expat
Synopsis: Create Details HTML Tag for Markdown and Package Documentation
Description:

Create a details HTML tag around R objects to place in a Markdown, Rmarkdown and roxygen2 documentation.

r-dchipio 0.1.5
Channel: guix-cran
Location: guix-cran/packages/d.scm (guix-cran packages d)
Home page: https://github.com/HenrikBengtsson/dChipIO
Licenses: LGPL 2.1+
Synopsis: Methods for Reading dChip Files
Description:

This package provides functions for reading DCP and CDF.bin files generated by the dChip software.

r-el2surv 1.1
Propagated dependencies: r-survival@3.8-3
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://cran.r-project.org/package=EL2Surv
Licenses: GPL 2+
Synopsis: Empirical Likelihood (EL) for Comparing Two Survival Functions
Description:

This package provides functions for computing critical values and implementing the one-sided/two-sided EL tests.

r-ecoindr 2.0
Propagated dependencies: r-vegan@2.7-2 r-splancs@2.01-45 r-rarity@1.3-8 r-picante@1.8.2 r-fd@1.0-12.3
Channel: guix-cran
Location: guix-cran/packages/e.scm (guix-cran packages e)
Home page: https://cran.r-project.org/package=EcoIndR
Licenses: GPL 2+
Synopsis: Ecological Indicators
Description:

Calculates several indices, such as of diversity, fluctuation, etc., and they are used to estimate ecological indicators.

r-filebin 0.0.6
Propagated dependencies: r-tidyr@1.3.1 r-tibble@3.3.0 r-stringi@1.8.7 r-purrr@1.2.0 r-logger@0.4.1 r-janitor@2.2.1 r-httr@1.4.7 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/f.scm (guix-cran packages f)
Home page: https://cran.r-project.org/package=filebin
Licenses: GPL 3
Synopsis: Wrapper for the Filebin File Sharing API
Description:

This package provides a wrapper for the Filebin API. Filebin implements convenient file sharing on the web.

r-fastrep 0.7
Propagated dependencies: r-tidyr@1.3.1 r-purrr@1.2.0 r-magrittr@2.0.4 r-lifecycle@1.0.4 r-kableextra@1.4.0 r-janitor@2.2.1 r-ggplot2@4.0.1 r-dplyr@1.1.4
Channel: guix-cran
Location: guix-cran/packages/f.scm (guix-cran packages f)
Home page: https://cran.r-project.org/package=fastrep
Licenses: GPL 2+ GPL 3+
Synopsis: Time-Saving Package for Creating Reports
Description:

This package provides templates for reports in rmarkdown and functions to create tables and summaries of data.

r-getable 1.0.3
Propagated dependencies: r-knitr@1.50
Channel: guix-cran
Location: guix-cran/packages/g.scm (guix-cran packages g)
Home page: https://yongfu.name/getable/
Licenses: Expat
Synopsis: Fetching Tabular Data "Onload" in Compiled R Markdown HTML Documents
Description:

Dynamically retrieve data from the web to render HTML tables on inspection in R Markdown HTML documents.

r-go2bigq 2.0.1
Propagated dependencies: r-rmpfr@1.1-2 r-gmp@0.7-5
Channel: guix-cran
Location: guix-cran/packages/g.scm (guix-cran packages g)
Home page: https://cran.r-project.org/package=go2bigq
Licenses: LGPL 3
Synopsis: Convert Large Numbers to Bigq Format
Description:

This function converts mfpr, numeric, or character strings representing numbers to bigq format without loss of precision.

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