Nipype provides a uniform interface to existing neuroimaging software and facilitates interaction between these packages within a single workflow. Nipype provides an environment that encourages interactive exploration of algorithms from different packages.

This package provides Python bindings for spoa, a C++ implementation of the partial order alignment (POA) algorithm (as described in 10.1093/bioinformatics/18.3.452) which is used to generate consensus sequences

TinyDB is a small document oriented database written in pure Python with no external dependencies. The targets are small apps that would be blown away by a SQL-DB or an external database server.

HTTPX2 is a fully featured HTTP client library for Python. It includes an integrated command line client, has support for both HTTP/1.1 and HTTP/2, and provides both sync and async APIs.

Inform is designed to display messages from programs that are typically run from a console. It provides a collection of ‘print’ functions that allow you to simply and cleanly print different types of messages.

DotMap is a dot-access dictionary subclass that has dynamic hierarchy creation, can be initialized with keys, can be initialized from a dictionary, can be convert to a dictionary, and is ordered by insertion.

Radian is an alternative console for the R program with multiline editing and rich syntax highlight. One would consider Radian as a IPython clone for R, though its design is more aligned to Julia.

This package provides a collection of (mostly) analytic functions in geophysics. We take an object oriented approach with the aim of having users be able to readily interact with the functions using Jupyter.

VorBin package is a Python implementation of the two-dimensional adaptive spatial binning method of Cappellari & Copin (2003). It uses Voronoi tessellations to bin data to a given minimum signal-to-noise ratio.

This package provides a library for the analysis of networks and graphs. It can handle large graphs very well and provides functions for generating random and regular graphs, graph visualization, centrality methods and much more.

This is a module for handling LDAP operations in Python. LDAP entries are mapped to a special Python case-insensitive dictionary, tracking the changes of the dictionary to modify the entry on the server easily.

pysiaf is a python package to access, interpret, maintain, and generate Handling of Science Instrument Aperture Files, in particular for JWST. Tools for applying the frame transformations, plotting, comparison, and validation are provided.

Brille is a C++ library for symmetry operations and linear interpolation within an irreducible part of the first Brillouin zone. It provides Python bindings via pybind11 for use in phonon calculations and inelastic neutron scattering simulations.

pynrrd is a Python module for reading and writing NRRD files (format designed to support scientific visualization and image processing involving N-dimensional raster data) into and from numpy arrays.

With apipkg you can control the exported namespace of a Python package and greatly reduce the number of imports for your users. It is a small pure Python module that works on virtually all Python versions.

python-schema is a library for validating Python data structures, such as those obtained from config-files, forms, external services or command-line parsing, converted from JSON/YAML (or something else) to Python data-types.

Mellon is a non-parametric cell-state density estimator based on a nearest-neighbors-distance distribution. It uses a sparse gaussian process to produce a differntiable density function that can be evaluated out of sample.

fiasco provides a Python interface to CHIANTI, an atomic database for astrophysical spectroscopy. In addition to several high-level abstractions of the atomic data, fiasco also provides many common atomic physics calculations.

Pylama is a code audit tool for Python and JavaScript to check for style, syntax and other code health metrics. It is essentially a convenient wrapper above tools such as Pyflakes, pydocstyle, pycodestyle and McCabe, among others.

A Python wrapper for the dialog utility. Its purpose is to provide an easy to use, pythonic and comprehensive Python interface to dialog. This allows one to make simple text-mode user interfaces on Unix-like systems

This package provides a way to write Shell commands from within Python. Python functions can be chained together to process input Bash control characters are escapted so that parameters can be passed without worrying about command injection.

PyLops is an open-source Python library focused on providing a backend-agnostic, idiomatic, matrix-free library of linear operators and related computations. It is inspired by the iconic MATLAB Spot – A Linear-Operator Toolbox project.

Pyppmd provides classes and functions for compressing and decompressing text data, using the Prediction by partial matching (PPM) compression algorithm variation H and I.2. It provides an API similar to Python's zlib/bz2/lzma modules.

Plotly's Python graphing library makes interactive,publication-quality graphs online. Examples of how to make line plots, scatter plots, area charts, bar charts, error bars, box plots, histograms, heatmaps, subplots, multiple-axes, polar charts, and bubble charts.